Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012845g0030 Nicotiana tabacum HOM05D002873 ORTHO05D002978 2.2e-25 118.6 83 100.0
Peaxi162Scf00479g00423 Petunia axillaris HOM05D002873 ORTHO05D002978 2.1e-15 85.5 67 85.1
Sopen02g015850 Solanum pennellii HOM05D002873 ORTHO05D002978 2.0e-13 79.0 67 86.6
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 2.2e-12 75.5 67 74.6
Solyc02g065640.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 3.7e-12 74.7 67 80.6
Migut.H00561 Erythranthe guttata HOM05D002873 ORTHO05D002978 1.1e-11 73.2 67 76.1
Solyc02g089570.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 1.1e-11 73.2 67 77.6
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 1.4e-11 72.8 67 58.2
Sabra04G0074500 Salix brachista HOM05D002873 ORTHO05D002978 7.0e-11 70.5 66 81.8
Solyc02g082990.4 Solanum lycopersicum HOM05D002873 ORTHO05D002978 7.0e-11 70.5 69 66.7
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 9.1e-11 70.1 66 77.3
Dinv33895 Davidia involucrata HOM05D002873 ORTHO05D002978 1.6e-10 69.3 67 64.2
MD17G1070100 Malus domestica HOM05D002873 ORTHO05D002978 1.6e-10 69.3 66 83.3
Sopen02g027770 Solanum pennellii HOM05D002873 ORTHO05D002978 1.6e-10 69.3 67 65.7
Nitab4.5_0015566g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 2.0e-10 68.9 67 77.6
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 2.0e-10 68.9 67 56.7
PGSC0003DMG400001534 Solanum tuberosum HOM05D002873 ORTHO05D002978 2.0e-10 68.9 67 65.7
Cc00_g21590 Coffea canephora HOM05D002873 ORTHO05D002978 5.9e-10 67.4 67 76.1
Migut.N00991 Erythranthe guttata HOM05D002873 ORTHO05D002978 5.9e-10 67.4 67 79.1
FAN05G4367 Fragaria x ananassa HOM05D002873 ORTHO05D002978 5.9e-10 67.4 67 73.1
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 5.9e-10 67.4 66 56.1
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 5.9e-10 67.4 66 56.1
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 5.9e-10 67.4 66 56.1
Sc11g0008050 Simmondsia chinensis HOM05D002873 ORTHO05D002978 5.9e-10 67.4 67 67.2
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 7.7e-10 67.0 66 62.1
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 7.7e-10 67.0 66 56.1
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 7.7e-10 67.0 66 56.1
Actinidia18105 Actinidia chinensis HOM05D002873 ORTHO05D002978 1.0e-09 66.6 67 62.7
Potri.017G108300 Populus trichocarpa HOM05D002873 ORTHO05D002978 1.0e-09 66.6 66 71.2
Potri.017G108350 Populus trichocarpa HOM05D002873 ORTHO05D002978 1.0e-09 66.6 66 71.2
Sabra04G0074600 Salix brachista HOM05D002873 ORTHO05D002978 1.0e-09 66.6 66 74.2
Dinv33894 Davidia involucrata HOM05D002873 ORTHO05D002978 1.3e-09 66.2 67 53.7
Migut.N00988 Erythranthe guttata HOM05D002873 ORTHO05D002978 1.3e-09 66.2 67 76.1
Peaxi162Scf00479g00055 Petunia axillaris HOM05D002873 ORTHO05D002978 1.7e-09 65.9 67 56.7
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 2.2e-09 65.5 66 54.5
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 2.9e-09 65.1 64 53.1
Oeu032858.1 Olea europaea HOM05D002873 ORTHO05D002978 2.9e-09 65.1 67 70.1
Potri.017G108400 Populus trichocarpa HOM05D002873 ORTHO05D002978 2.9e-09 65.1 66 66.7
GSVIVG01036492001 Vitis vinifera HOM05D002873 ORTHO05D002978 3.8e-09 64.7 67 52.2
CsaV3_5G004610 Cucumis sativus L. HOM05D002873 ORTHO05D002978 5.0e-09 64.3 66 69.7
Sed0018450 Sechium edule HOM05D002873 ORTHO05D002978 5.0e-09 64.3 66 72.7
Glyma.18G278600 Glycine max HOM05D002873 ORTHO05D002978 6.5e-09 63.9 62 71.0
Oeu049338.1 Olea europaea HOM05D002873 ORTHO05D002978 6.5e-09 63.9 67 73.1
Peaxi162Scf00479g00065 Petunia axillaris HOM05D002873 ORTHO05D002978 6.5e-09 63.9 67 55.2
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 8.5e-09 63.5 66 63.6
arahy.Tifrunner.gnm1.ann1.4T36CH Arachis hypogaea HOM05D002873 ORTHO05D002978 1.5e-08 62.8 65 52.3
arahy.Tifrunner.gnm1.ann1.JTM1YJ Arachis hypogaea HOM05D002873 ORTHO05D002978 1.5e-08 62.8 65 52.3
MELO3C022078.2 Cucumis melo HOM05D002873 ORTHO05D002978 1.5e-08 62.8 66 68.2
Eucgr.I02095 Eucalyptus grandis HOM05D002873 ORTHO05D002978 1.5e-08 62.8 66 59.1
Cpa.g.sc188.26 Carica papaya HOM05D002873 ORTHO05D002978 1.9e-08 62.4 64 64.1
Prupe.3G244700 Prunus persica HOM05D002873 ORTHO05D002978 1.9e-08 62.4 64 53.1
CSS0045706 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 2.5e-08 62.0 67 65.7
CSS0047860 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 2.5e-08 62.0 67 65.7
CsaV3_5G038880 Cucumis sativus L. HOM05D002873 ORTHO05D002978 2.5e-08 62.0 70 60.0
Sc11g0008060 Simmondsia chinensis HOM05D002873 ORTHO05D002978 2.5e-08 62.0 66 69.7
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 2.5e-08 62.0 66 51.5
MELO3C005500.2 Cucumis melo HOM05D002873 ORTHO05D002978 3.2e-08 61.6 66 68.2
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 3.2e-08 61.6 66 48.5
Ca_06717_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 1.2e-07 59.7 62 51.6
Glyma.08G255700 Glycine max HOM05D002873 ORTHO05D002978 1.2e-07 59.7 62 54.8
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 1.6e-07 59.3 66 53.0
vmacro18088 Vaccinium macrocarpon HOM05D002873 ORTHO05D002978 1.6e-07 59.3 67 70.1
MELO3C005501.2 Cucumis melo HOM05D002873 ORTHO05D002978 2.1e-07 58.9 66 74.2
Peaxi162Scf01056g00020 Petunia axillaris HOM05D002873 ORTHO05D002978 2.1e-07 58.9 67 62.7
vmacro18087 Vaccinium macrocarpon HOM05D002873 ORTHO05D002978 2.1e-07 58.9 67 74.6
CAN.G497.26 Capsicum annuum HOM05D002873 ORTHO05D002978 2.7e-07 58.5 67 70.1
CAN.G497.27 Capsicum annuum HOM05D002873 ORTHO05D002978 2.7e-07 58.5 67 70.1
Haze_17643 Corylus avellana HOM05D002873 ORTHO05D002978 2.7e-07 58.5 67 47.8
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 3.6e-07 58.2 66 47.0
Dinv36852 Davidia involucrata HOM05D002873 ORTHO05D002978 3.6e-07 58.2 65 55.4
Nitab4.5_0001324g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 3.6e-07 58.2 67 68.7
Solyc02g089580.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 3.6e-07 58.2 67 67.2
Cfa020560 Carpinus fangiana HOM05D002873 ORTHO05D002978 4.7e-07 57.8 67 47.8
Cc07_g04790 Coffea canephora HOM05D002873 ORTHO05D002978 6.1e-07 57.4 67 71.6
Dinv34873 Davidia involucrata HOM05D002873 ORTHO05D002978 6.1e-07 57.4 69 62.3
Potri.004G107600 Populus trichocarpa HOM05D002873 ORTHO05D002978 6.1e-07 57.4 66 72.7
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 8.0e-07 57.0 66 48.5
PGR042G3018 Punica granatum HOM05D002873 ORTHO05D002978 8.0e-07 57.0 66 65.2
Sed0026183 Sechium edule HOM05D002873 ORTHO05D002978 8.0e-07 57.0 66 57.6
HanXRQChr12g0380071 Helianthus annuus HOM05D021913 ORTHO05D002978 1.0e-06 56.6 67 70.1
Hma1.2p1_0588F.1_g184450 Hydrangea macrophylla HOM05D002873 ORTHO05D002978 1.0e-06 56.6 60 71.7
THA.LOC109116088 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 1.0e-06 56.6 66 56.1
Actinidia36291 Actinidia chinensis HOM05D002873 ORTHO05D002978 1.4e-06 56.2 67 59.7
Cfa018418 Carpinus fangiana HOM05D002873 ORTHO05D002978 1.4e-06 56.2 67 70.1
Ca_20748_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 1.4e-06 56.2 65 72.3
Rhsim08G0081200 Rhododendron simsii HOM05D002873 ORTHO05D002978 1.4e-06 56.2 67 73.1
Thecc.04G146000 Theobroma cacao HOM05D002873 ORTHO05D002978 1.4e-06 56.2 66 69.7
Sed0018699 Sechium edule HOM05D002873 ORTHO05D002978 1.8e-06 55.8 66 63.6
PGSC0003DMG400010052 Solanum tuberosum HOM05D002873 ORTHO05D002978 1.8e-06 55.8 67 67.2
CiPaw.03G007000 Carya illinoinensis HOM05D002873 ORTHO05D002978 2.3e-06 55.5 67 62.7
Glyma.19G040000 Glycine max HOM05D002873 ORTHO05D002978 2.3e-06 55.5 61 70.5
Sed0007664 Sechium edule HOM05D002873 ORTHO05D002978 2.3e-06 55.5 59 78.0
Peaxi162Scf00019g00065 Petunia axillaris HOM05D002873 ORTHO05D002978 3.0e-06 55.1 31 83.9
Nitab4.5_0006224g0060 Nicotiana tabacum HOM05D002873 ORTHO05D002978 4.0e-06 54.7 64 50.0
Potri.004G107500 Populus trichocarpa HOM05D002873 ORTHO05D002978 5.2e-06 54.3 66 71.2
vmacro18089 Vaccinium macrocarpon HOM05D002873 ORTHO05D002978 5.2e-06 54.3 67 73.1
Migut.K00873 Erythranthe guttata HOM05D002873 ORTHO05D002978 6.8e-06 53.9 67 65.7
Dinv38615 Davidia involucrata HOM05D002873 ORTHO05D002978 8.8e-06 53.5 70 42.9
Migut.H00555 Erythranthe guttata HOM05D002873 ORTHO05D002978 8.8e-06 53.5 62 43.5
FAN05G2856 Fragaria x ananassa HOM05D040180 ORTHO05D035606 8.8e-06 53.5 67 71.6


User provided reference genes

Program Settings