Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 1.0e-73 280.0 148 100.0
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 6.9e-70 267.3 148 95.9
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 9.1e-62 240.4 148 86.5
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 4.5e-61 238.0 148 85.8
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 5.0e-60 234.6 148 83.8
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 4.0e-57 224.9 144 82.6
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 1.8e-49 199.5 148 73.6
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 2.7e-37 159.1 146 61.6
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 1.3e-36 156.8 148 62.2
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 1.7e-36 156.4 150 61.3
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 1.7e-36 156.4 145 61.4
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 1.5e-35 153.3 151 61.6
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 7.3e-35 151.0 151 60.9
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 2.1e-34 149.4 149 57.7
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 4.7e-34 148.3 147 59.2
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 6.1e-34 147.9 149 59.1
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 5.8e-32 141.4 146 58.2
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 1.3e-31 140.2 132 60.6
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 2.2e-31 139.4 144 58.3
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 2.9e-31 139.0 145 57.2
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 1.4e-30 136.7 148 56.8
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 1.9e-30 136.3 146 56.2
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 5.4e-30 134.8 137 51.8
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 5.4e-30 134.8 137 51.8
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 9.2e-30 134.0 140 55.0
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 2.0e-29 132.9 149 51.7
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 2.7e-29 132.5 144 56.9
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 3.5e-29 132.1 149 56.4
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 4.6e-29 131.7 147 53.1
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 7.8e-29 131.0 140 51.4
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.7e-28 129.8 140 50.7
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 1.7e-28 129.8 148 52.0
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 1.7e-28 129.8 113 60.2
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 3.0e-28 129.0 147 53.1
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 3.0e-28 129.0 147 52.4
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 6.6e-28 127.9 144 53.5
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 8.6e-28 127.5 144 53.5
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 1.5e-27 126.7 149 54.4
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 4.3e-27 125.2 145 53.1
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 9.5e-27 124.0 149 51.0
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 1.2e-26 123.6 131 53.4
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 2.1e-26 122.9 148 53.4
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 2.8e-26 122.5 145 53.1
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 3.6e-26 122.1 143 54.5
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 3.6e-26 122.1 144 51.4
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 1.1e-25 120.6 145 52.4
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 1.8e-25 119.8 146 52.7
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 3.1e-25 119.0 133 53.4
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 5.2e-25 118.2 141 51.8
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 5.2e-25 118.2 147 46.9
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 1.5e-24 116.7 149 48.3
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 2.6e-24 115.9 137 48.2
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 3.4e-24 115.5 142 52.1
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 3.4e-24 115.5 143 46.9
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.3e-23 113.6 115 58.3
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 1.3e-23 113.6 135 50.4
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 1.3e-23 113.6 143 49.0
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.7e-23 113.2 137 48.9
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 1.7e-23 113.2 137 48.9
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 3.7e-23 112.1 142 52.1
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 4.9e-23 111.7 137 48.2
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 6.4e-23 111.3 144 47.9
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 6.4e-23 111.3 142 50.0
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 8.3e-23 110.9 136 50.7
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 1.9e-22 109.8 142 49.3
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 2.4e-22 109.4 137 46.0
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 3.2e-22 109.0 90 64.4
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 4.1e-22 108.6 145 49.7
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 3.5e-21 105.5 145 46.9
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 3.5e-21 105.5 138 47.8
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 1.0e-20 104.0 71 70.4
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 3.0e-20 102.4 147 43.5
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 1.9e-19 99.8 145 47.6
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 2.5e-19 99.4 136 48.5
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 4.3e-19 98.6 142 45.1
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 1.2e-18 97.1 147 45.6
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 1.2e-18 97.1 143 44.1
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 2.1e-18 96.3 146 46.6
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 6.2e-18 94.7 137 48.2
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 1.8e-17 93.2 141 45.4
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 2.3e-17 92.8 146 45.2
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 4.0e-17 92.0 145 44.8
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 2.6e-16 89.4 96 51.0
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 4.4e-16 88.6 147 44.2
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 5.8e-16 88.2 137 46.0
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 7.5e-16 87.8 134 45.5
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 7.5e-16 87.8 140 45.0
SEGI_02084 Sequoiadendron giganteum HOM05D006398 ORTHO05D007983 2.2e-15 86.3 147 40.1
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 8.3e-15 84.3 155 40.6
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 8.3e-15 84.3 100 52.0
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 8.3e-15 84.3 125 47.2
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.1e-14 84.0 96 51.0
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 1.4e-14 83.6 140 44.3
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 2.4e-14 82.8 140 42.1
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 7.1e-14 81.3 142 39.4
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 2.7e-13 79.3 145 42.8
TAR628G0945 Trochodendron aralioides HOM05D006398 ORTHO05D007983 1.5e-11 73.6 107 45.8
Sc03g0004180 Simmondsia chinensis HOM05D006398 ORTHO05D007983 4.7e-10 68.6 144 34.7
AT3G51500 Arabidopsis thaliana HOM05D006398 ORTHO05D007983 8.1e-10 67.8 100 46.0
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 1.4e-09 67.0 107 43.0
arahy.Tifrunner.gnm1.ann1.GQ5KDA Arachis hypogaea HOM05D006398 ORTHO05D007983 1.8e-09 66.6 50 66.0
SHI11157 Sapria himalayana HOM05D006398 ORTHO05D007983 6.8e-09 64.7 135 37.0
A03p48310 Brassica napus HOM05D006398 ORTHO05D007983 2.6e-08 62.8 56 62.5
THA.LOC109117268 Tarenaya hassleriana HOM05D006398 ORTHO05D007983 3.4e-08 62.4 129 37.2
AL5G31940 Arabidopsis lyrata HOM05D006398 ORTHO05D007983 5.8e-08 61.6 128 36.7
Carub.0005s1788 Capsella rubella HOM05D006398 ORTHO05D007983 1.7e-07 60.1 126 38.1
Sp5g10740 Schrenkiella parvula HOM05D006398 ORTHO05D007983 3.8e-07 58.9 137 35.8
Cpa.g.sc178.36 Carica papaya HOM05D006398 ORTHO05D007983 1.1e-06 57.4 104 39.4
Aa31LG4G7260 Aethionema arabicum HOM05D000087 ORTHO05D002585 1.4e-06 57.0 61 50.8
A01p23410 Brassica napus HOM05D006398 ORTHO05D007983 1.4e-06 57.0 105 40.0
BraA01t02248Z Brassica rapa HOM05D006398 ORTHO05D007983 1.9e-06 56.6 108 40.7
AUR62039711 Chenopodium quinoa HOM05D006398 ORTHO05D007983 1.9e-06 56.6 143 31.5
AUR62036260 Chenopodium quinoa HOM05D006398 ORTHO05D007983 3.2e-06 55.8 143 30.8
Lalb_Chr05g0215011 Lupinus albus HOM05D006398 ORTHO05D007983 7.1e-06 54.7 144 31.9
C01p29040 Brassica napus HOM05D006398 ORTHO05D007983 9.2e-06 54.3 58 53.4
BolC1t02836H Brassica oleracea HOM05D006398 ORTHO05D007983 9.2e-06 54.3 58 53.4
CARHR161080 Cardamine hirsuta HOM05D006398 ORTHO05D007983 9.2e-06 54.3 108 37.0


User provided reference genes

Program Settings