Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012448g0010 Nicotiana tabacum HOM05D004568 ORTHO05D005343 9.7e-127 456.8 233 100.0
Peaxi162Scf00208g00131 Petunia axillaris HOM05D004568 ORTHO05D005343 1.7e-54 216.9 256 57.8
Nitab4.5_0001554g0060 Nicotiana tabacum HOM05D004568 ORTHO05D005343 2.7e-52 209.5 247 57.5
Nitab4.5_0004681g0010 Nicotiana tabacum HOM05D004568 ORTHO05D005343 4.6e-52 208.8 247 57.5
PGSC0003DMG400002843 Solanum tuberosum HOM05D004568 ORTHO05D005343 5.5e-45 185.3 215 57.7
Solyc04g005920.1 Solanum lycopersicum HOM05D004568 ORTHO05D005343 2.7e-44 183.0 217 55.3
Sopen04g001970 Solanum pennellii HOM05D004568 ORTHO05D005343 3.0e-43 179.5 217 54.8
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.1e-40 171.0 259 46.7
PGSC0003DMG400007516 Solanum tuberosum HOM05D004568 ORTHO05D005343 2.4e-40 169.9 241 50.6
Solyc05g010450.1 Solanum lycopersicum HOM05D004568 ORTHO05D005343 2.9e-38 162.9 244 48.0
Sopen05g006240 Solanum pennellii HOM05D004568 ORTHO05D005343 2.9e-38 162.9 244 48.0
Oeu033529.1 Olea europaea HOM05D004568 ORTHO05D005343 5.0e-38 162.2 236 50.8
Dinv16554 Davidia involucrata HOM05D004568 ORTHO05D005343 7.9e-36 154.8 262 44.3
Hma1.2p1_1424F.1_g282720 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 3.9e-35 152.5 269 44.2
ClCG05G023290 Citrullus lanatus HOM05D004568 ORTHO05D005343 3.3e-34 149.4 225 47.6
SalBow8G3235 Salvia bowleyana HOM05D004568 ORTHO05D005343 9.7e-34 147.9 237 45.1
SalBow8G5572 Salvia bowleyana HOM05D004568 ORTHO05D005343 9.7e-34 147.9 237 45.1
CiPaw.05G118300 Carya illinoinensis HOM05D004568 ORTHO05D005343 2.8e-33 146.4 298 40.6
DCAR_026699 Daucus carota HOM05D004568 ORTHO05D005343 3.7e-33 146.0 267 41.6
CSS0002717 Camellia sinensis var. sinensis HOM05D004568 ORTHO05D005343 1.1e-32 144.4 241 48.1
Lalb_Chr10g0099511 Lupinus albus HOM05D004568 ORTHO05D005343 1.8e-32 143.7 253 44.7
MELO3C012188.2 Cucumis melo HOM05D004568 ORTHO05D005343 3.1e-32 142.9 290 40.3
Migut.L01125 Erythranthe guttata HOM05D004568 ORTHO05D005343 3.1e-32 142.9 248 45.2
Lj2g0022626 Lotus japonicus HOM05D004568 ORTHO05D005343 3.1e-32 142.9 273 39.2
Potri.010G133600 Populus trichocarpa HOM05D004568 ORTHO05D005343 4.1e-32 142.5 268 44.4
Sed0022479 Sechium edule HOM05D004568 ORTHO05D005343 4.1e-32 142.5 275 41.1
CiPaw.06G097400 Carya illinoinensis HOM05D004568 ORTHO05D005343 6.9e-32 141.7 300 42.7
QL03p044380 Quercus lobata HOM05D004568 ORTHO05D005343 1.2e-31 141.0 268 41.8
Lsat_1_v5_gn_3_58841 Lactuca sativa HOM05D004568 ORTHO05D005343 2.0e-31 140.2 233 43.3
Cfa008803 Carpinus fangiana HOM05D004568 ORTHO05D005343 2.6e-31 139.8 301 40.2
Sabra10G0102200 Salix brachista HOM05D004568 ORTHO05D005343 2.6e-31 139.8 275 42.9
ECA246G3306 Erigeron canadensis HOM05D004568 ORTHO05D005343 7.7e-31 138.3 233 45.1
Duzib251G0342 Durio zibethinus HOM05D004568 ORTHO05D005343 1.3e-30 137.5 301 41.5
Phvul.003G034500 Phaseolus vulgaris HOM05D004568 ORTHO05D005343 1.3e-30 137.5 294 38.4
Potri.T062072 Populus trichocarpa HOM05D004568 ORTHO05D005343 2.2e-30 136.7 268 42.9
Potri.008G109600 Populus trichocarpa HOM05D004568 ORTHO05D005343 2.9e-30 136.3 268 42.9
CsaV3_5G033720 Cucumis sativus L. HOM05D004568 ORTHO05D005343 3.8e-30 136.0 217 46.1
VMungo1215G2036 Vigna mungo HOM05D004568 ORTHO05D005343 6.5e-30 135.2 293 38.2
Sabra08G0083400 Salix brachista HOM05D004568 ORTHO05D005343 5.5e-29 132.1 270 42.6
SGA_v2.0_scaffold16G07859 Striga asiatica HOM05D004568 ORTHO05D005343 9.4e-29 131.3 216 44.9
Ca_05120_v3 Cicer arietinum L. HOM05D004568 ORTHO05D005343 2.7e-28 129.8 270 38.9
Sc04g0007050 Simmondsia chinensis HOM05D004568 ORTHO05D005343 4.7e-28 129.0 249 43.0
Duzib168G1705 Durio zibethinus HOM05D004568 ORTHO05D005343 1.8e-27 127.1 267 41.6
Duzib268G1242 Durio zibethinus HOM05D004568 ORTHO05D005343 1.8e-27 127.1 296 39.9
Thecc.09G210800 Theobroma cacao HOM05D004568 ORTHO05D005343 2.3e-27 126.7 268 41.0
Atru.chr11.1442 Acer truncatum HOM05D004568 ORTHO05D005343 5.1e-27 125.6 305 38.7
Atru.chr11.1472 Acer truncatum HOM05D004568 ORTHO05D005343 5.1e-27 125.6 305 38.7
CSS0045744 Camellia sinensis var. sinensis HOM05D004568 ORTHO05D005343 6.7e-27 125.2 230 42.6
Cpa.g.sc1.257 Carica papaya HOM05D004568 ORTHO05D005343 1.1e-26 124.4 275 38.5
CANSAT64G0418 Cannabis sativa HOM05D004568 ORTHO05D005343 1.5e-26 124.0 327 36.4
HanXRQChr17g0551111 Helianthus annuus HOM05D004568 ORTHO05D005343 1.5e-26 124.0 223 43.0
HanXRQChr17g0551511 Helianthus annuus HOM05D004568 ORTHO05D005343 1.5e-26 124.0 223 43.0
Thecc.02G315200 Theobroma cacao HOM05D004568 ORTHO05D005343 2.6e-26 123.2 287 39.4
Hma1.2p1_1459F.1_g284900 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 7.4e-26 121.7 256 40.6
Prupe.1G299900 Prunus persica HOM05D004568 ORTHO05D005343 7.4e-26 121.7 291 36.4
Gohir.A03G108200 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.3e-25 120.9 264 39.8
MD13G1052200 Malus domestica HOM05D004568 ORTHO05D005343 3.7e-25 119.4 296 39.2
Gohir.D02G133400 Gossypium hirsutum HOM05D004568 ORTHO05D005343 4.8e-25 119.0 231 42.4
Gorai.005G149300 Gossypium raimondii HOM05D004568 ORTHO05D005343 4.8e-25 119.0 231 42.4
Ciclev10033580m.g Citrus clementina HOM05D004568 ORTHO05D005343 6.3e-25 118.6 266 40.6
Rhsim09G0116100 Rhododendron simsii HOM05D004568 ORTHO05D005343 1.8e-24 117.1 250 37.6
TPR.G2653 Trifolium pratense HOM05D004568 ORTHO05D005343 2.4e-24 116.7 289 36.7
Rhsim09G0116400 Rhododendron simsii HOM05D004568 ORTHO05D005343 3.1e-24 116.3 251 37.5
Manes.06G076600 Manihot esculenta HOM05D004568 ORTHO05D005343 4.1e-24 115.9 293 39.2
FAN07G0048 Fragaria x ananassa HOM05D004568 ORTHO05D005343 6.9e-24 115.2 282 35.5
COL.COLO4_34999 Corchorus olitorius HOM05D004568 ORTHO05D005343 9.1e-24 114.8 262 40.8
TWI79G0507 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 2.0e-23 113.6 280 38.2
COL.COLO4_27716 Corchorus olitorius HOM05D004568 ORTHO05D005343 4.5e-23 112.5 260 40.4
TWI31G1373 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 4.5e-23 112.5 226 40.3
FAN17G1809 Fragaria x ananassa HOM05D004568 ORTHO05D005343 5.9e-23 112.1 289 34.6
FAN22G1274 Fragaria x ananassa HOM05D004568 ORTHO05D005343 7.7e-23 111.7 290 34.5
HanXRQChr12g0365221 Helianthus annuus HOM05D004568 ORTHO05D005343 1.0e-22 111.3 227 41.4
MD16G1057700 Malus domestica HOM05D004568 ORTHO05D005343 1.0e-22 111.3 305 35.4
FvH4_4g28580 Fragaria vesca HOM05D004568 ORTHO05D005343 1.7e-22 110.5 293 34.5
TWI75G0122 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 3.8e-22 109.4 278 38.8
FAN12G0798 Fragaria x ananassa HOM05D004568 ORTHO05D005343 1.4e-21 107.5 292 34.9
Cc11_g11080 Coffea canephora HOM05D004568 ORTHO05D005343 1.9e-21 107.1 218 42.7
RcHm_v2.0_Chr4g0436671 Rosa chinensis HOM05D004568 ORTHO05D005343 1.9e-21 107.1 309 33.7
SGA_v2.0_scaffold36G14507 Striga asiatica HOM05D004568 ORTHO05D005343 1.9e-21 107.1 193 41.5
HanXRQChr08g0214641 Helianthus annuus HOM05D004568 ORTHO05D005343 2.5e-21 106.7 230 38.7
HanXRQChr08g0214671 Helianthus annuus HOM05D004568 ORTHO05D005343 2.5e-21 106.7 230 38.7
GSVIVG01012027001 Vitis vinifera HOM05D004568 ORTHO05D005343 2.5e-21 106.7 148 48.6
Eucgr.G02393 Eucalyptus grandis HOM05D004568 ORTHO05D005343 3.2e-21 106.3 174 43.1
Manes.14G094400 Manihot esculenta HOM05D004568 ORTHO05D005343 3.2e-21 106.3 252 39.7
DCAR_030135 Daucus carota HOM05D004568 ORTHO05D005343 5.5e-21 105.5 248 39.9
Medtr6g472100 Medicago truncatula HOM05D004568 ORTHO05D005343 2.1e-20 103.6 264 35.2
Psat2g096280 Pisum sativum HOM05D004568 ORTHO05D005343 2.1e-20 103.6 262 37.8
Gohir.D12G160800 Gossypium hirsutum HOM05D004568 ORTHO05D005343 3.6e-20 102.8 221 41.6
THA.LOC104824044 Tarenaya hassleriana HOM05D004568 ORTHO05D005343 4.7e-20 102.4 161 47.2
PGR119G0824 Punica granatum HOM05D004568 ORTHO05D005343 1.4e-19 100.9 308 37.0
Gohir.A13G213600 Gossypium hirsutum HOM05D004568 ORTHO05D005343 3.0e-19 99.8 282 37.6
PSO782G5402 Papaver somniferum HOM05D004568 ORTHO05D005343 6.7e-19 98.6 276 37.7
Gohir.D13G217400 Gossypium hirsutum HOM05D004568 ORTHO05D005343 8.8e-19 98.2 278 37.8
Gorai.013G247900 Gossypium raimondii HOM05D004568 ORTHO05D005343 8.8e-19 98.2 278 37.8
PSO063G5818 Papaver somniferum HOM05D004568 ORTHO05D005343 8.8e-19 98.2 286 36.0
Gohir.A12G157850 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.1e-18 97.8 219 40.2
Gohir.A12G157951 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.1e-18 97.8 219 40.2
Nn3g17622 Nelumbo nucifera HOM05D004568 ORTHO05D005343 2.6e-18 96.7 226 38.9
Gorai.008G173800 Gossypium raimondii HOM05D004568 ORTHO05D005343 4.4e-18 95.9 165 45.5
Lsat_1_v5_gn_8_37860 Lactuca sativa HOM05D004568 ORTHO05D005343 1.3e-17 94.4 208 37.5
Actinidia37881 Actinidia chinensis HOM05D004568 ORTHO05D005343 8.2e-17 91.7 134 48.5
Peaxi162Scf00188g00418 Petunia axillaris HOM05D004568 ORTHO05D005343 1.8e-16 90.5 63 74.6
AUR62007782 Chenopodium quinoa HOM05D004568 ORTHO05D005343 5.3e-16 89.0 246 36.6
EL10Ac6g14584 Beta vulgaris HOM05D004568 ORTHO05D005343 2.6e-15 86.7 268 35.8
TAR374G1393 Trochodendron aralioides HOM05D004568 ORTHO05D005343 2.6e-15 86.7 227 35.7
Glyma.02G128700 Glycine max HOM05D004568 ORTHO05D005343 4.5e-15 85.9 283 33.9
ECA233G1390 Erigeron canadensis HOM05D004568 ORTHO05D005343 1.7e-14 84.0 185 37.3
unitig_747.g21193 Utricularia gibba HOM05D004568 ORTHO05D005343 2.9e-14 83.2 259 35.5
THA.LOC104805234 Tarenaya hassleriana HOM05D004568 ORTHO05D005343 3.8e-14 82.8 172 41.3
Aqoxy3G03818 Aquilegia oxysepala HOM05D004568 ORTHO05D005343 1.5e-13 80.9 164 39.6
Lj3P1023T52 Lonicera japonica HOM05D004568 ORTHO05D005343 2.5e-13 80.1 155 43.2
TAR622G0675 Trochodendron aralioides HOM05D004568 ORTHO05D005343 2.5e-13 80.1 148 39.9
AUR62019434 Chenopodium quinoa HOM05D000052 ORTHO05D000046 7.2e-13 78.6 197 37.1
vmacro10495 Vaccinium macrocarpon HOM05D004568 ORTHO05D005343 2.1e-12 77.0 240 31.7
Aa31LG2G6720 Aethionema arabicum HOM05D004568 ORTHO05D005343 3.6e-12 76.3 191 37.7
arahy.Tifrunner.gnm1.ann1.35X7C5 Arachis hypogaea HOM05D004568 ORTHO05D005343 1.4e-11 74.3 290 29.7
Glyma.04G152800 Glycine max HOM05D004568 ORTHO05D005343 1.4e-11 74.3 275 32.4
Haze_11818 Corylus avellana HOM05D004568 ORTHO05D005343 1.8e-11 73.9 209 36.8
Thhalv10004268m.g Eutrema salsugineum HOM05D004568 ORTHO05D005343 1.8e-11 73.9 169 37.9
AUR62039200 Chenopodium quinoa HOM05D004568 ORTHO05D005343 2.3e-11 73.6 277 31.8
Carub.0005s0337 Capsella rubella HOM05D004568 ORTHO05D005343 8.8e-11 71.6 151 40.4
arahy.Tifrunner.gnm1.ann1.Y3DNXR Arachis hypogaea HOM05D004568 ORTHO05D005343 3.7e-09 66.2 285 28.1
AL5G14100 Arabidopsis lyrata HOM05D004568 ORTHO05D005343 8.2e-09 65.1 171 37.4
AT3G25590 Arabidopsis thaliana HOM05D004568 ORTHO05D005343 1.1e-08 64.7 151 39.1
BcaB07g30266 Brassica carinata HOM05D004568 ORTHO05D005343 1.4e-08 64.3 198 36.9
BcaC04g21427 Brassica carinata HOM05D004568 ORTHO05D005343 3.1e-08 63.2 166 34.3
Hma1.2p1_0337F.1_g129430 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 5.3e-08 62.4 141 37.6
BolC9t56047H Brassica oleracea HOM05D004568 ORTHO05D005343 7.0e-08 62.0 151 35.1
Sp2g14860 Schrenkiella parvula HOM05D004568 ORTHO05D005343 1.6e-07 60.8 180 33.3
BraA09t38078Z Brassica rapa HOM05D004568 ORTHO05D005343 2.0e-07 60.5 142 36.6
A09p24900 Brassica napus HOM05D004568 ORTHO05D005343 2.7e-07 60.1 152 35.5
C09p31920 Brassica napus HOM05D004568 ORTHO05D005343 3.5e-07 59.7 151 34.4
Ah.04g164810 Amaranthus hybridus HOM05D004568 ORTHO05D005343 1.0e-06 58.2 235 31.9
BcaC03g17273 Brassica carinata HOM05D004568 ORTHO05D005343 1.7e-06 57.4 161 33.5
BolC2t11302H Brassica oleracea HOM05D004568 ORTHO05D005343 1.7e-06 57.4 161 33.5
BraA02t08408Z Brassica rapa HOM05D004568 ORTHO05D005343 2.9e-06 56.6 156 32.7
A02p33910 Brassica napus HOM05D004568 ORTHO05D005343 5.0e-06 55.8 135 32.6
BraA06t27185Z Brassica rapa HOM05D004568 ORTHO05D005343 5.0e-06 55.8 161 34.2


User provided reference genes

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