Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 3.4e-86 321.6 161 100.0
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 2.6e-54 215.7 153 73.9
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 1.7e-53 213.0 155 71.6
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 1.9e-52 209.5 160 69.4
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 3.2e-52 208.8 160 69.4
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 5.1e-50 201.4 155 69.0
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 8.2e-40 167.5 155 59.4
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 5.3e-39 164.9 161 55.9
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 6.9e-39 164.5 161 52.8
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 7.6e-38 161.0 157 54.8
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 6.5e-37 157.9 156 53.2
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 8.4e-37 157.5 153 56.2
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 8.4e-37 157.5 153 58.8
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 8.4e-37 157.5 154 54.5
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 5.5e-36 154.8 153 56.2
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 7.1e-36 154.5 152 55.9
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 2.1e-35 152.9 153 55.6
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 2.7e-35 152.5 154 55.2
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 3.0e-34 149.1 154 53.2
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 3.0e-34 149.1 150 53.3
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 3.9e-34 148.7 152 55.9
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 5.1e-34 148.3 153 55.6
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.1e-33 147.1 144 54.9
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.1e-33 147.1 144 54.9
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 1.1e-33 147.1 144 54.9
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 2.5e-33 146.0 144 52.8
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 5.7e-33 144.8 156 51.3
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 5.7e-33 144.8 143 55.2
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 1.3e-32 143.7 144 54.9
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 1.6e-32 143.3 154 51.9
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 1.6e-32 143.3 156 50.6
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 1.6e-32 143.3 152 53.9
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 1.6e-32 143.3 143 53.1
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 1.6e-32 143.3 150 52.7
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 2.2e-32 142.9 151 55.0
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 2.2e-32 142.9 154 53.2
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 2.8e-32 142.5 144 53.5
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 2.8e-32 142.5 144 53.5
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 3.7e-32 142.1 150 55.3
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 8.2e-32 141.0 153 52.9
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 1.1e-31 140.6 154 52.6
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 1.4e-31 140.2 152 52.6
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.4e-31 140.2 161 47.2
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 2.4e-31 139.4 151 53.0
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 2.4e-31 139.4 151 53.0
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 2.4e-31 139.4 136 55.9
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 3.1e-31 139.0 152 52.0
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 4.1e-31 138.7 157 49.0
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 1.5e-30 136.7 151 49.0
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 1.5e-30 136.7 151 49.0
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 1.5e-30 136.7 151 49.0
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 1.5e-30 136.7 151 49.0
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 1.5e-30 136.7 151 49.0
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 1.5e-30 136.7 152 52.0
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 2.0e-30 136.3 151 49.0
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 2.0e-30 136.3 151 49.0
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 2.0e-30 136.3 151 49.0
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 2.6e-30 136.0 144 54.9
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 4.5e-30 135.2 151 48.3
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 5.9e-30 134.8 136 52.2
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 1.7e-29 133.3 148 50.7
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 2.2e-29 132.9 143 49.0
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 2.9e-29 132.5 143 55.2
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 3.8e-29 132.1 151 49.0
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 5.0e-29 131.7 143 49.0
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 8.5e-29 131.0 142 50.0
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 8.5e-29 131.0 183 44.3
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 1.4e-28 130.2 148 52.7
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 1.4e-28 130.2 153 49.0
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 2.5e-28 129.4 143 53.1
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 2.5e-28 129.4 143 47.6
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 9.3e-28 127.5 143 47.6
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 9.3e-28 127.5 149 50.3
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 1.2e-27 127.1 165 47.9
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 2.1e-27 126.3 151 46.4
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 2.7e-27 125.9 144 48.6
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 4.6e-27 125.2 165 45.5
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 2.3e-26 122.9 136 52.2
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 6.7e-26 121.3 83 69.9
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 8.8e-26 120.9 136 50.0
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 1.9e-25 119.8 144 50.7
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 4.3e-25 118.6 154 44.8
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 5.7e-25 118.2 156 41.7
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 7.4e-25 117.9 87 66.7
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 1.7e-24 116.7 87 66.7
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 6.3e-24 114.8 62 85.5
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 6.9e-23 111.3 63 77.8
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 9.1e-23 110.9 144 44.4
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 2.0e-22 109.8 96 58.3
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 2.0e-22 109.8 83 65.1
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 4.5e-22 108.6 86 60.5
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 7.7e-22 107.8 87 57.5
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 7.7e-22 107.8 87 57.5
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.0e-21 107.5 62 77.4
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 2.9e-21 105.9 85 62.4
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 3.8e-21 105.5 85 61.2
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 3.8e-21 105.5 64 75.0
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 5.0e-21 105.1 141 44.0
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 6.5e-21 104.8 91 57.1
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 1.1e-20 104.0 85 60.0
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 1.1e-20 104.0 85 60.0
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 1.9e-20 103.2 133 45.9
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 3.2e-20 102.4 166 41.6
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 1.6e-19 100.1 63 73.0
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 2.7e-19 99.4 61 72.1
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 6.1e-19 98.2 169 40.8
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 6.1e-19 98.2 62 61.3
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 1.4e-15 87.0 130 43.1
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 1.8e-15 86.7 159 32.7
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 3.1e-15 85.9 81 53.1
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 6.9e-15 84.7 159 32.1
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 2.5e-12 76.3 46 69.6
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 3.2e-12 75.9 190 27.9
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 2.1e-11 73.2 151 33.1
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 2.6e-09 66.2 42 64.3
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 2.2e-08 63.2 88 40.9
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 2.8e-08 62.8 81 38.3
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 1.6e-06 57.0 61 44.3


User provided reference genes

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