Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010949g0010 Nicotiana tabacum HOM05D007758 ORTHO05D009788 1.6e-97 359.4 179 100.0
CAN.G1445.11 Capsicum annuum HOM05D007758 ORTHO05D009788 2.1e-12 76.6 41 92.7
Peaxi162Scf00715g00026 Petunia axillaris HOM05D007758 ORTHO05D009788 3.6e-12 75.9 40 92.5
PGSC0003DMG400001836 Solanum tuberosum HOM05D007758 ORTHO05D009788 6.1e-12 75.1 41 90.2
arahy.Tifrunner.gnm1.ann1.EY31BM Arachis hypogaea HOM05D007758 ORTHO05D009788 1.0e-11 74.3 131 39.7
AL7G37620 Arabidopsis lyrata HOM05D007758 ORTHO05D009788 5.2e-11 72.0 41 85.4
Cc08_g01520 Coffea canephora HOM05D007758 ORTHO05D009788 5.2e-11 72.0 60 65.0
AT4G17085 Arabidopsis thaliana HOM05D007758 ORTHO05D009788 1.5e-10 70.5 41 82.9
BcaB04g18382 Brassica carinata HOM05D007758 ORTHO05D009788 1.5e-10 70.5 41 82.9
BcaC07g38037 Brassica carinata HOM05D007758 ORTHO05D009788 1.5e-10 70.5 41 82.9
A08p12870 Brassica napus HOM05D007758 ORTHO05D009788 1.5e-10 70.5 41 82.9
BolC8t48433H Brassica oleracea HOM05D007758 ORTHO05D009788 1.5e-10 70.5 41 82.9
BraA08t33271Z Brassica rapa HOM05D007758 ORTHO05D009788 1.5e-10 70.5 41 82.9
Carub.0007s2429 Capsella rubella HOM05D007758 ORTHO05D009788 1.5e-10 70.5 38 86.8
CARHR223670 Cardamine hirsuta HOM05D007758 ORTHO05D009788 1.5e-10 70.5 41 82.9
Thhalv10026742m.g Eutrema salsugineum HOM05D007758 ORTHO05D009788 1.5e-10 70.5 41 82.9
COL.COLO4_06700 Corchorus olitorius HOM05D007758 ORTHO05D009788 3.4e-10 69.3 37 86.5
CSS0049692 Camellia sinensis var. sinensis HOM05D007758 ORTHO05D009788 5.7e-10 68.6 51 68.6
BcaC06g33532 Brassica carinata HOM05D007758 ORTHO05D009788 7.5e-10 68.2 39 84.6
BcaNung04665 Brassica carinata HOM05D007758 ORTHO05D009788 7.5e-10 68.2 39 84.6
A03p50300 Brassica napus HOM05D007758 ORTHO05D009788 7.5e-10 68.2 39 84.6
BraA03t14119Z Brassica rapa HOM05D007758 ORTHO05D009788 7.5e-10 68.2 39 84.6
CSS0001994 Camellia sinensis var. sinensis HOM05D007758 ORTHO05D009788 1.3e-09 67.4 42 78.6
RcHm_v2.0_Chr6g0259711 Rosa chinensis HOM05D007758 ORTHO05D009788 1.3e-09 67.4 41 78.0
FAN13G2273 Fragaria x ananassa HOM05D007758 ORTHO05D009788 1.7e-09 67.0 41 75.6
FAN18G3236 Fragaria x ananassa HOM05D007758 ORTHO05D009788 1.7e-09 67.0 41 75.6
Hma1.2p1_0414F.1_g147490 Hydrangea macrophylla HOM05D007758 ORTHO05D009788 2.2e-09 66.6 36 88.9
THA.LOC104814457 Tarenaya hassleriana HOM05D007758 ORTHO05D009788 2.2e-09 66.6 39 76.9
Nn1g00706 Nelumbo nucifera HOM05D007758 ORTHO05D009788 2.8e-09 66.2 37 83.8
Zm00001eb180740 Zea mays HOM05D007758 ORTHO05D009788 2.8e-09 66.2 40 77.5
C07p48590 Brassica napus HOM05D007758 ORTHO05D009788 3.7e-09 65.9 39 82.1
BolC7t45367H Brassica oleracea HOM05D007758 ORTHO05D009788 3.7e-09 65.9 39 82.1
TAR629G0116 Trochodendron aralioides HOM05D007758 ORTHO05D009788 3.7e-09 65.9 41 78.0
TAR633G2270 Trochodendron aralioides HOM05D007758 ORTHO05D009788 3.7e-09 65.9 37 83.8
DCAR_008312 Daucus carota HOM05D007758 ORTHO05D009788 4.9e-09 65.5 36 86.1
Migut.E00814 Erythranthe guttata HOM05D007758 ORTHO05D009788 4.9e-09 65.5 37 81.1
Hma1.2p1_1673F.1_g296900 Hydrangea macrophylla HOM05D007758 ORTHO05D009788 6.3e-09 65.1 37 83.8
Prupe.5G051100 Prunus persica HOM05D007758 ORTHO05D009788 6.3e-09 65.1 37 81.1
Gohir.D09G192200 Gossypium hirsutum HOM05D007758 ORTHO05D009788 8.3e-09 64.7 59 59.3
Gorai.006G215000 Gossypium raimondii HOM05D007758 ORTHO05D009788 8.3e-09 64.7 59 59.3
CANSAT21G1691 Cannabis sativa HOM05D007758 ORTHO05D009788 1.1e-08 64.3 41 75.6
ClCG09G012550 Citrullus lanatus HOM05D007758 ORTHO05D009788 1.4e-08 63.9 37 78.4
Lsat_1_v5_gn_6_90760 Lactuca sativa HOM05D007758 ORTHO05D009788 1.4e-08 63.9 36 80.6
PGR042G0139 Punica granatum HOM05D007758 ORTHO05D009788 1.4e-08 63.9 37 81.1
Sed0000899 Sechium edule HOM05D007758 ORTHO05D009788 1.4e-08 63.9 41 73.2
BolC7t45365H Brassica oleracea HOM05D007758 ORTHO05D009788 1.8e-08 63.5 34 88.2
Cfa012357 Carpinus fangiana HOM05D007758 ORTHO05D009788 1.8e-08 63.5 58 56.9
CiPaw.12G057000 Carya illinoinensis HOM05D007758 ORTHO05D009788 1.8e-08 63.5 57 59.6
MELO3C003346.2 Cucumis melo HOM05D007758 ORTHO05D009788 1.8e-08 63.5 36 80.6
MD04G1056100 Malus domestica HOM05D007758 ORTHO05D009788 1.8e-08 63.5 41 75.6
Hund11300 Selenicereus undatus HOM05D007758 ORTHO05D009788 1.8e-08 63.5 39 76.9
Haze_08336 Corylus avellana HOM05D007758 ORTHO05D009788 2.4e-08 63.2 37 78.4
CsaV3_3G049700 Cucumis sativus L. HOM05D007758 ORTHO05D009788 2.4e-08 63.2 36 77.8
Gohir.A09G197600 Gossypium hirsutum HOM05D007758 ORTHO05D009788 4.1e-08 62.4 37 78.4
Manes.15G171100 Manihot esculenta HOM05D007758 ORTHO05D009788 4.1e-08 62.4 36 77.8
Oeu035101.1 Olea europaea HOM05D007758 ORTHO05D009788 4.1e-08 62.4 36 80.6
Thecc.03G237200 Theobroma cacao HOM05D007758 ORTHO05D009788 9.1e-08 61.2 49 63.3
arahy.Tifrunner.gnm1.ann1.24R365 Arachis hypogaea HOM05D007758 ORTHO05D009788 2.0e-07 60.1 36 75.0
Ca_03905_v3 Cicer arietinum L. HOM05D000421 ORTHO05D009788 2.0e-07 60.1 36 77.8
Ca_22029_v3 Cicer arietinum L. HOM05D007758 ORTHO05D009788 2.0e-07 60.1 36 77.8
Ca_28157_v3 Cicer arietinum L. HOM05D007758 ORTHO05D009788 2.0e-07 60.1 36 77.8
PSO782G2991 Papaver somniferum HOM05D007758 ORTHO05D009788 2.0e-07 60.1 36 75.0
GSVIVG01013273001 Vitis vinifera HOM05D007758 ORTHO05D009788 2.0e-07 60.1 35 80.0
TWI60G0956 Tripterygium wilfordii HOM05D007758 ORTHO05D009788 2.7e-07 59.7 40 72.5
Glyma.05G067900 Glycine max HOM05D007758 ORTHO05D009788 3.5e-07 59.3 36 75.0
Glyma.17G150000 Glycine max HOM05D007758 ORTHO05D009788 3.5e-07 59.3 36 75.0
Phvul.003G226800 Phaseolus vulgaris HOM05D007758 ORTHO05D009788 3.5e-07 59.3 36 75.0
Lj4g0024059 Lotus japonicus HOM05D007758 ORTHO05D009788 4.5e-07 58.9 36 75.0
Medtr4g099120 Medicago truncatula HOM05D007758 ORTHO05D009788 4.5e-07 58.9 36 72.2
Atru.chr9.1149 Acer truncatum HOM05D007758 ORTHO05D009788 5.9e-07 58.5 37 73.0
FAN08G1799 Fragaria x ananassa HOM05D007758 ORTHO05D009788 5.9e-07 58.5 41 73.2
Psat4g076760 Pisum sativum HOM05D007758 ORTHO05D009788 5.9e-07 58.5 36 72.2
Oeu017314.1 Olea europaea HOM05D007758 ORTHO05D009788 1.0e-06 57.8 36 77.8
TPR.G17254 Trifolium pratense HOM05D007758 ORTHO05D009788 1.7e-06 57.0 36 69.4
Ciclev10023239m.g Citrus clementina HOM05D007758 ORTHO05D009788 2.3e-06 56.6 36 69.4
Lalb_Chr09g0329711 Lupinus albus HOM05D007758 ORTHO05D009788 2.3e-06 56.6 36 75.0
Medtr3g053460 Medicago truncatula HOM05D007758 ORTHO05D009788 2.3e-06 56.6 36 69.4
CiPaw.09G190000 Carya illinoinensis HOM05D007758 ORTHO05D009788 3.8e-06 55.8 57 52.6
CiPaw.10G048600 Carya illinoinensis HOM05D007758 ORTHO05D009788 3.8e-06 55.8 36 72.2


User provided reference genes

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