Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009607g0030 Nicotiana tabacum HOM05D006050 ORTHO05D007457 0.0e+00 1083.6 551 100.0
Nitab4.5_0002275g0100 Nicotiana tabacum HOM05D006050 ORTHO05D007457 2.3e-291 1005.0 553 93.7
CAN.G650.1 Capsicum annuum HOM05D006050 ORTHO05D007457 1.8e-248 862.4 552 81.9
Solyc02g070560.3 Solanum lycopersicum HOM05D006050 ORTHO05D007457 1.8e-248 862.4 552 82.6
Peaxi162Scf00170g00718 Petunia axillaris HOM05D006050 ORTHO05D007457 1.7e-230 802.7 550 78.5
Cc09_g09460 Coffea canephora HOM05D006050 ORTHO05D007457 3.1e-179 632.5 493 65.9
Oeu052380.1 Olea europaea HOM05D006050 ORTHO05D007457 4.0e-179 632.1 467 70.0
Migut.M00918 Erythranthe guttata HOM05D006050 ORTHO05D007457 3.5e-175 619.0 496 63.7
Dinv30732 Davidia involucrata HOM05D006050 ORTHO05D007457 5.8e-170 601.7 437 70.7
Atru.chr10.1253 Acer truncatum HOM05D006050 ORTHO05D007457 1.2e-167 594.0 551 59.9
Rhsim13G0194500 Rhododendron simsii HOM05D006050 ORTHO05D007457 6.0e-167 591.7 524 61.5
Lj2C306G12 Lonicera japonica HOM05D006050 ORTHO05D007457 1.5e-165 587.0 538 60.2
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla HOM05D006050 ORTHO05D007457 2.5e-165 586.3 446 68.2
Actinidia19520 Actinidia chinensis HOM05D006050 ORTHO05D007457 2.4e-163 579.7 498 62.0
GSVIVG01021436001 Vitis vinifera HOM05D006050 ORTHO05D007457 2.2e-161 573.2 459 63.4
HanXRQChr02g0047351 Helianthus annuus HOM05D006050 ORTHO05D007457 3.2e-160 569.3 535 58.9
QL05p058532 Quercus lobata HOM05D006050 ORTHO05D007457 9.3e-160 567.8 509 60.3
PGR083G2192 Punica granatum HOM05D006050 ORTHO05D007457 3.0e-158 562.8 472 61.7
Potri.011G080600 Populus trichocarpa HOM05D006050 ORTHO05D007457 8.7e-158 561.2 482 62.2
Manes.17G069500 Manihot esculenta HOM05D006050 ORTHO05D007457 3.3e-157 559.3 484 59.7
TWI73G0574 Tripterygium wilfordii HOM05D006050 ORTHO05D007457 2.8e-156 556.2 476 63.0
MD05G1284800 Malus domestica HOM05D006050 ORTHO05D007457 1.4e-155 553.9 506 60.9
FvH4_3g05720 Fragaria vesca HOM05D006050 ORTHO05D007457 6.9e-155 551.6 506 59.1
TAR627G0203 Trochodendron aralioides HOM05D006050 ORTHO05D007457 2.2e-153 546.6 540 56.1
Thecc.06G151800 Theobroma cacao HOM05D006050 ORTHO05D007457 4.9e-153 545.4 481 59.7
Aqoxy4G00089 Aquilegia oxysepala HOM05D006050 ORTHO05D007457 1.9e-152 543.5 558 54.8
Sabra11G0069700 Salix brachista HOM05D006050 ORTHO05D007457 3.2e-152 542.7 500 59.8
RcHm_v2.0_Chr5g0013951 Rosa chinensis HOM05D006050 ORTHO05D007457 7.1e-152 541.6 480 60.6
MD10G1263200 Malus domestica HOM05D006050 ORTHO05D007457 1.0e-150 537.7 465 61.7
vmacro04186 Vaccinium macrocarpon HOM05D006050 ORTHO05D007457 5.6e-149 531.9 395 69.1
SalBow8G2368 Salvia bowleyana HOM05D006050 ORTHO05D007457 1.3e-148 530.8 420 64.3
CiPaw.09G124900 Carya illinoinensis HOM05D006050 ORTHO05D007457 3.7e-148 529.3 522 56.9
Gorai.009G155500 Gossypium raimondii HOM05D006050 ORTHO05D007457 1.8e-147 526.9 476 59.5
Gohir.A05G149000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 2.4e-147 526.6 476 59.5
Eucgr.D00300 Eucalyptus grandis HOM05D006050 ORTHO05D007457 3.1e-147 526.2 510 55.7
Gohir.D05G151500 Gossypium hirsutum HOM05D006050 ORTHO05D007457 6.9e-147 525.0 476 59.2
ECA248G2274 Erigeron canadensis HOM05D006050 ORTHO05D007457 5.8e-146 521.9 444 62.4
Haze_05583 Corylus avellana HOM05D006050 ORTHO05D007457 2.4e-144 516.5 545 55.0
ClCG03G007090 Citrullus lanatus HOM05D006050 ORTHO05D007457 5.5e-144 515.4 476 58.6
Sed0022060 Sechium edule HOM05D006050 ORTHO05D007457 1.6e-143 513.8 487 56.7
Sabra11G0067500 Salix brachista HOM05D006050 ORTHO05D007457 2.7e-143 513.1 531 55.0
CsaV3_1G032660 Cucumis sativus L. HOM05D006050 ORTHO05D007457 6.0e-143 511.9 481 57.4
PSO017G0250 Papaver somniferum HOM05D006050 ORTHO05D007457 1.9e-141 506.9 481 57.0
SGA_v2.0_scaffold1G00164 Striga asiatica HOM05D006050 ORTHO05D007457 1.9e-141 506.9 466 57.1
PSO170G3783 Papaver somniferum HOM05D006050 ORTHO05D007457 2.1e-140 503.4 481 56.5
Nn3g20737 Nelumbo nucifera HOM05D006050 ORTHO05D007457 5.3e-139 498.8 544 54.0
Sc05g0006350 Simmondsia chinensis HOM05D006050 ORTHO05D007457 2.5e-136 490.0 472 55.9
Glyma.15G094900 Glycine max HOM05D006050 ORTHO05D007457 3.5e-135 486.1 485 54.8
Lsat_1_v5_gn_1_97741 Lactuca sativa HOM05D006050 ORTHO05D007457 4.6e-135 485.7 477 56.4
FAN21G0460 Fragaria x ananassa HOM05D006050 ORTHO05D007457 3.0e-134 483.0 476 56.1
Phvul.006G163900 Phaseolus vulgaris HOM05D006050 ORTHO05D007457 1.6e-132 477.2 519 52.2
FAN25G0090 Fragaria x ananassa HOM05D006050 ORTHO05D007457 2.8e-132 476.5 513 53.2
Lj6g0009694 Lotus japonicus HOM05D006050 ORTHO05D007457 3.7e-132 476.1 538 50.7
VMungo0540G2452 Vigna mungo HOM05D006050 ORTHO05D007457 3.1e-131 473.0 479 54.3
DCAR_003921 Daucus carota HOM05D006050 ORTHO05D007457 4.1e-131 472.6 441 58.0
Duzib192G0778 Durio zibethinus HOM05D006050 ORTHO05D007457 9.0e-131 471.5 484 54.3
Ciclev10017950m.g Citrus clementina HOM05D006050 ORTHO05D007457 1.0e-129 468.0 451 56.5
THA.LOC104812850 Tarenaya hassleriana HOM05D006050 ORTHO05D007457 1.1e-128 464.5 478 53.6
Ca_00551_v3 Cicer arietinum L. HOM05D006050 ORTHO05D007457 1.8e-126 457.2 475 53.9
Sp7g15790 Schrenkiella parvula HOM05D006050 ORTHO05D007457 4.3e-125 452.6 510 52.4
Gorai.011G043000 Gossypium raimondii HOM05D006050 ORTHO05D007457 7.4e-125 451.8 419 54.9
Psat1g190800 Pisum sativum HOM05D006050 ORTHO05D007457 7.4e-125 451.8 487 53.4
Thhalv10025036m.g Eutrema salsugineum HOM05D006050 ORTHO05D007457 9.7e-125 451.4 497 52.5
TPR.G28613 Trifolium pratense HOM05D006050 ORTHO05D007457 6.3e-124 448.7 481 53.0
AL7G36120 Arabidopsis lyrata HOM05D006050 ORTHO05D007457 3.1e-123 446.4 494 52.6
EL10Ac8g19724 Beta vulgaris HOM05D006050 ORTHO05D007457 3.1e-123 446.4 476 49.4
Ah.09g232650 Amaranthus hybridus HOM05D006050 ORTHO05D007457 1.3e-121 441.0 484 47.7
AT4G18270 Arabidopsis thaliana HOM05D006050 ORTHO05D007457 2.2e-121 440.3 455 53.8
Duzib235G1544 Durio zibethinus HOM05D006050 ORTHO05D007457 1.2e-119 434.5 514 50.8
Medtr2g019630 Medicago truncatula HOM05D006050 ORTHO05D007457 1.2e-119 434.5 472 52.8
BraA03t14200Z Brassica rapa HOM05D006050 ORTHO05D007457 4.6e-119 432.6 476 52.7
A03p51180 Brassica napus HOM05D006050 ORTHO05D007457 6.1e-119 432.2 476 52.7
C07p49580 Brassica napus HOM05D006050 ORTHO05D007457 3.9e-118 429.5 476 52.7
BolC7t45462H Brassica oleracea HOM05D006050 ORTHO05D007457 8.8e-118 428.3 476 52.5
MELO3C002716.2 Cucumis melo HOM05D006050 ORTHO05D007457 1.1e-117 427.9 420 55.7
arahy.Tifrunner.gnm1.ann1.9VA34X Arachis hypogaea HOM05D006050 ORTHO05D007457 4.1e-115 419.5 546 46.7
arahy.Tifrunner.gnm1.ann1.49YCVY Arachis hypogaea HOM05D006050 ORTHO05D007457 1.7e-113 414.1 477 49.9
ATR0044G011 Amborella trichopoda HOM05D006050 ORTHO05D007457 3.8e-113 412.9 422 52.4
SGA_v2.0_scaffold333G48995 Striga asiatica HOM05D001706 ORTHO05D007457 7.2e-112 408.7 435 52.2
Aa31LG6G960 Aethionema arabicum HOM05D006050 ORTHO05D007457 2.1e-111 407.1 479 50.3
Cpa.g.sc166.17 Carica papaya HOM05D006050 ORTHO05D007457 8.8e-110 401.7 335 63.6
AagrBONN_evm.TU.Sc2ySwM_228.2617 Anthoceros agrestis HOM05D006050 ORTHO05D007457 5.7e-109 399.1 377 56.5
AUR62027517 Chenopodium quinoa HOM05D006050 ORTHO05D007457 2.2e-108 397.1 587 40.5
SMO239G0146 Selaginella moellendorffii HOM05D006050 ORTHO05D007457 1.0e-102 378.3 354 56.8
HPP92_021321 Vanilla planifolia HOM05D006050 ORTHO05D007457 5.7e-101 372.5 447 47.4
HPP92_008747 Vanilla planifolia HOM05D006050 ORTHO05D007457 2.7e-98 363.6 424 47.6
Sopen02g019650 Solanum pennellii HOM05D006050 ORTHO05D007457 8.0e-95 352.1 357 58.3
Mapoly0001s0010 Marchantia polymorpha HOM05D006050 ORTHO05D007457 9.8e-93 345.1 422 47.4
FvH4_3g05710 Fragaria vesca HOM05D006050 ORTHO05D007457 1.7e-92 344.4 373 52.8
CBR_g3965 Chara braunii HOM05D006050 ORTHO05D007457 1.8e-83 314.3 375 46.4
PGSC0003DMG402021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 1.1e-80 305.1 209 78.0
PGSC0003DMG401021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 2.8e-79 300.4 166 94.6
MBI10_g02216_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 7.5e-77 292.4 197 75.6
Carub.0007s2301 Capsella rubella HOM05D006050 ORTHO05D007457 6.2e-71 272.7 193 71.5
AUR62030211 Chenopodium quinoa HOM05D006050 ORTHO05D007457 4.9e-68 263.1 355 42.8
Lalb_Chr18g0055531 Lupinus albus HOM05D006050 ORTHO05D007457 7.8e-66 255.8 190 70.0
Glyma.13G217500 Glycine max HOM05D006050 ORTHO05D007457 8.9e-62 242.3 290 46.2
Prupe.4G079600 Prunus persica HOM05D006050 ORTHO05D007457 7.5e-61 239.2 313 43.8
MBI10_g02215_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 9.9e-61 238.8 308 47.1
COL.COLO4_31087 Corchorus olitorius HOM05D006050 ORTHO05D007457 3.5e-58 230.3 299 42.8
BcaNung05669 Brassica carinata HOM05D006050 ORTHO05D007457 1.0e-57 228.8 166 70.5
Lalb_Chr18g0055521 Lupinus albus HOM05D006050 ORTHO05D007457 1.1e-56 225.3 317 42.3
PRCOL_00000982 Prasinoderma coloniale HOM05D006050 ORTHO05D007457 2.4e-54 217.6 351 41.6
unitig_32.g11518 Utricularia gibba HOM05D006050 ORTHO05D007457 1.7e-52 211.5 275 43.6
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 6.0e-50 203.0 208 51.0
DCAR_029765 Daucus carota HOM05D006050 ORTHO05D007457 2.4e-43 181.0 200 53.5
Zm00001eb120180 Zea mays HOM05D006050 ORTHO05D007457 7.1e-43 179.5 282 40.1
SEGI_20862 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 2.7e-42 177.6 123 71.5
Carub.0007s2300 Capsella rubella HOM05D006050 ORTHO05D007457 3.5e-42 177.2 293 40.6
Cpa.g.sc166.18 Carica papaya HOM05D006050 ORTHO05D007457 3.0e-41 174.1 107 80.4
Gohir.D10G040800 Gossypium hirsutum HOM05D006050 ORTHO05D007457 2.5e-40 171.0 222 41.0
Gohir.A10G040000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 3.3e-40 170.6 222 41.0
CARHR225070 Cardamine hirsuta HOM05D006050 ORTHO05D007457 2.8e-39 167.5 254 42.9
FAN11G0378 Fragaria x ananassa HOM05D006050 ORTHO05D007457 3.6e-39 167.2 144 59.7
MCO07G478 Micromonas commoda HOM05D006050 ORTHO05D007457 2.0e-37 161.4 393 34.4
SEGI_21633 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 4.5e-37 160.2 180 50.6
AUR62030212 Chenopodium quinoa HOM05D006050 ORTHO05D007457 4.8e-31 140.2 144 51.4
Pp3c6_19460 Physcomitrium patens HOM05D006050 ORTHO05D007457 3.4e-29 134.0 206 38.3
PSO063G2775 Papaver somniferum HOM05D006050 ORTHO05D007457 4.6e-26 123.6 104 63.5
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.6e-23 115.2 122 54.1
Mapoly0042s0029 Marchantia polymorpha HOM05D006050 ORTHO05D007457 4.0e-22 110.5 165 40.0
DCAR_011844 Daucus carota HOM05D006050 ORTHO05D007457 7.6e-21 106.3 86 66.3
CSS0043541 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.3e-20 105.5 66 81.8
COL.COLO4_31088 Corchorus olitorius HOM05D006050 ORTHO05D007457 3.5e-18 97.4 61 77.0
CSS0038270 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.5e-16 92.0 72 54.2
CSS0030855 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 6.3e-15 86.7 46 87.0
CSS0036908 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 6.3e-15 86.7 46 87.0
unitig_32.g11513 Utricularia gibba HOM05D057528 ORTHO05D030710 8.2e-15 86.3 77 49.4
vmacro04187 Vaccinium macrocarpon HOM05D006050 ORTHO05D030710 6.9e-14 83.2 86 47.7
Cpa.g.sc166.16 Carica papaya HOM05D006050 ORTHO05D007457 1.0e-12 79.3 124 40.3
PGSC0003DMG403021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 1.4e-11 75.5 59 69.5


User provided reference genes

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