Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008863g0010 Nicotiana tabacum HOM05D003996 ORTHO05D004665 0.0e+00 1315.4 671 100.0
Nitab4.5_0000482g0250 Nicotiana tabacum HOM05D003996 ORTHO05D004665 0.0e+00 1236.5 662 96.4
PGSC0003DMG400000690 Solanum tuberosum HOM05D003996 ORTHO05D004665 5.2e-290 1000.7 685 78.1
Sopen07g024690 Solanum pennellii HOM05D003996 ORTHO05D004665 5.8e-289 997.3 685 78.0
Solyc07g049350.3 Solanum lycopersicum HOM05D003996 ORTHO05D004665 7.0e-287 990.3 685 77.4
Peaxi162Scf00921g00252 Petunia axillaris HOM05D003996 ORTHO05D004665 2.0e-273 945.7 673 77.3
CAN.G1493.1 Capsicum annuum HOM05D003996 ORTHO05D004665 6.4e-272 940.6 666 77.0
Dinv39747 Davidia involucrata HOM05D003996 ORTHO05D004665 2.1e-222 776.2 688 61.6
Migut.H01245 Erythranthe guttata HOM05D003996 ORTHO05D004665 4.8e-211 738.4 693 59.7
Dinv08722 Davidia involucrata HOM05D003996 ORTHO05D004665 6.3e-211 738.0 629 63.0
Hma1.2p1_2319F.1_g319820 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 3.5e-209 732.3 675 59.3
Cc05_g02970 Coffea canephora HOM05D003996 ORTHO05D004665 1.0e-208 730.7 679 59.5
MSTRG.14132 Avicennia marina HOM05D003996 ORTHO05D004665 7.2e-207 724.5 684 59.4
Oeu046908.1 Olea europaea HOM05D003996 ORTHO05D004665 1.4e-205 720.3 650 60.8
Hma1.2p1_0177F.1_g078040 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 1.8e-205 719.9 665 58.5
DCAR_012922 Daucus carota HOM05D003996 ORTHO05D004665 5.2e-205 718.4 676 59.2
GSVIVG01030501001 Vitis vinifera HOM05D003996 ORTHO05D004665 9.7e-204 714.1 686 57.9
Rhsim04G0050600 Rhododendron simsii HOM05D003996 ORTHO05D004665 4.8e-203 711.8 656 59.5
CANSAT64G2545 Cannabis sativa HOM05D003996 ORTHO05D004665 9.1e-202 707.6 682 57.9
Sabra14G0120200 Salix brachista HOM05D003996 ORTHO05D004665 4.5e-201 705.3 667 57.9
Ciclev10014490m.g Citrus clementina HOM05D003996 ORTHO05D004665 7.7e-201 704.5 684 57.0
Potri.014G158200 Populus trichocarpa HOM05D003996 ORTHO05D004665 1.1e-199 700.7 671 57.5
Potri.002G224900 Populus trichocarpa HOM05D003996 ORTHO05D004665 7.2e-199 698.0 665 57.3
TWI75G1163 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 9.4e-199 697.6 684 56.9
Gorai.001G196200 Gossypium raimondii HOM05D003996 ORTHO05D004665 1.2e-198 697.2 685 57.7
DCAR_021140 Daucus carota HOM05D003996 ORTHO05D004665 2.1e-198 696.4 696 56.2
vmacro09358 Vaccinium macrocarpon HOM05D003996 ORTHO05D004665 3.6e-198 695.7 687 57.1
Thecc.01G181600 Theobroma cacao HOM05D003996 ORTHO05D004665 8.0e-198 694.5 688 57.7
Duzib211G0403 Durio zibethinus HOM05D003996 ORTHO05D004665 1.4e-197 693.7 683 57.2
TWI36G0149 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 8.8e-197 691.0 686 56.3
TPR.G29036 Trifolium pratense HOM05D003996 ORTHO05D004665 2.2e-195 686.4 661 56.4
Duzib138G0037 Durio zibethinus HOM05D003996 ORTHO05D004665 4.8e-195 685.3 654 58.4
QL08p030755 Quercus lobata HOM05D003996 ORTHO05D004665 2.0e-193 679.9 679 56.1
HanXRQChr16g0506421 Helianthus annuus HOM05D003996 ORTHO05D004665 2.7e-193 679.5 684 55.3
MBI16_g26185_MAGBIO Magnolia biondii HOM05D003996 ORTHO05D004665 4.5e-193 678.7 696 55.2
SGA_v2.0_scaffold159G37554 Striga asiatica HOM05D003996 ORTHO05D004665 1.5e-191 673.7 651 59.1
Lsat_1_v5_gn_7_95060 Lactuca sativa HOM05D003996 ORTHO05D004665 2.5e-191 672.9 653 55.9
Manes.12G069800 Manihot esculenta HOM05D003996 ORTHO05D004665 3.3e-191 672.5 672 56.0
CsaV3_6G015350 Cucumis sativus L. HOM05D003996 ORTHO05D004665 5.5e-191 671.8 694 54.8
ClCG02G018060 Citrullus lanatus HOM05D003996 ORTHO05D004665 7.2e-191 671.4 689 54.9
PSO210G1396 Papaver somniferum HOM05D003996 ORTHO05D004665 9.5e-191 671.0 692 55.6
Actinidia10801 Actinidia chinensis HOM05D003996 ORTHO05D004665 1.6e-190 670.2 609 60.3
Lj6g0017826 Lotus japonicus HOM05D003996 ORTHO05D004665 3.6e-190 669.1 672 54.9
Gohir.D07G175200 Gossypium hirsutum HOM05D003996 ORTHO05D004665 8.0e-190 667.9 696 55.3
PSO832G2142 Papaver somniferum HOM05D003996 ORTHO05D004665 2.3e-189 666.4 681 55.4
MELO3C019738.2 Cucumis melo HOM05D003996 ORTHO05D004665 4.0e-189 665.6 669 56.5
Eucgr.K00757 Eucalyptus grandis HOM05D003996 ORTHO05D004665 4.0e-189 665.6 672 55.2
Gohir.A07G082500 Gossypium hirsutum HOM05D003996 ORTHO05D004665 1.2e-188 664.1 663 57.2
Atru.chr6.3252 Acer truncatum HOM05D003996 ORTHO05D004665 2.6e-188 662.9 690 54.2
ECA234G3864 Erigeron canadensis HOM05D003996 ORTHO05D004665 4.4e-188 662.1 678 54.0
Gohir.A07G168800 Gossypium hirsutum HOM05D003996 ORTHO05D004665 5.7e-188 661.8 696 54.7
Sed0004670 Sechium edule HOM05D003996 ORTHO05D004665 7.5e-188 661.4 676 54.1
Aqoxy1G02929 Aquilegia oxysepala HOM05D003996 ORTHO05D004665 1.7e-187 660.2 671 54.7
TAR626G1560 Trochodendron aralioides HOM05D003996 ORTHO05D004665 3.7e-187 659.1 673 56.6
Nn1g07292 Nelumbo nucifera HOM05D003996 ORTHO05D004665 4.9e-187 658.7 676 53.3
Lalb_Chr18g0049761 Lupinus albus HOM05D003996 ORTHO05D004665 6.3e-187 658.3 672 55.4
AUR62032475 Chenopodium quinoa HOM05D003996 ORTHO05D004665 2.4e-186 656.4 658 55.5
Gohir.D07G089000 Gossypium hirsutum HOM05D003996 ORTHO05D004665 2.4e-186 656.4 663 55.7
Gorai.001G095400 Gossypium raimondii HOM05D003996 ORTHO05D004665 5.4e-186 655.2 663 55.5
Lalb_Chr15g0080851 Lupinus albus HOM05D003996 ORTHO05D004665 1.3e-184 650.6 666 54.5
PSO541G1393 Papaver somniferum HOM05D003996 ORTHO05D004665 1.3e-184 650.6 693 52.5
Hund15359 Selenicereus undatus HOM05D003996 ORTHO05D004665 2.3e-184 649.8 662 56.0
Medtr3g080400 Medicago truncatula HOM05D003996 ORTHO05D004665 3.8e-184 649.0 673 53.5
Prupe.3G210900 Prunus persica HOM05D003996 ORTHO05D004665 5.0e-184 648.7 783 51.5
Thhalv10016338m.g Eutrema salsugineum HOM05D003996 ORTHO05D004665 1.9e-183 646.7 676 52.4
FvH4_6g42290 Fragaria vesca HOM05D003996 ORTHO05D004665 3.3e-183 646.0 723 53.4
RcHm_v2.0_Chr2g0158131 Rosa chinensis HOM05D003996 ORTHO05D004665 4.3e-183 645.6 722 53.2
ECA236G3366 Erigeron canadensis HOM05D003996 ORTHO05D004665 2.1e-182 643.3 691 55.6
FAN14G1081 Fragaria x ananassa HOM05D003996 ORTHO05D004665 2.1e-182 643.3 723 53.3
Phvul.006G012800 Phaseolus vulgaris HOM05D003996 ORTHO05D004665 8.0e-182 641.3 683 52.7
CSS0033567 Camellia sinensis var. sinensis HOM05D003996 ORTHO05D004665 1.8e-181 640.2 586 60.4
PSO675G0796 Papaver somniferum HOM05D003996 ORTHO05D004665 1.8e-181 640.2 693 51.8
arahy.Tifrunner.gnm1.ann1.LM4IV6 Arachis hypogaea HOM05D003996 ORTHO05D004665 2.3e-181 639.8 652 54.4
Ca_16283_v3 Cicer arietinum L. HOM05D003996 ORTHO05D004665 1.5e-180 637.1 635 56.7
FAN09G4790 Fragaria x ananassa HOM05D003996 ORTHO05D004665 2.6e-180 636.3 724 52.2
Sp4g15330 Schrenkiella parvula HOM05D003996 ORTHO05D004665 3.4e-180 636.0 684 51.3
AT2G32970 Arabidopsis thaliana HOM05D003996 ORTHO05D004665 9.8e-180 634.4 681 51.8
THA.LOC104801005 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 1.3e-179 634.0 679 52.3
MD09G1113700 Malus domestica HOM05D003996 ORTHO05D004665 2.9e-179 632.9 746 51.2
FAN02G1294 Fragaria x ananassa HOM05D003996 ORTHO05D004665 1.2e-177 627.5 740 51.2
ECA240G4712 Erigeron canadensis HOM05D003996 ORTHO05D004665 1.6e-177 627.1 678 54.6
Oeu010926.4 Olea europaea HOM05D003996 ORTHO05D004665 1.6e-177 627.1 605 56.0
THA.LOC104826134 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 1.6e-177 627.1 666 52.4
HanXRQChr10g0310161 Helianthus annuus HOM05D003996 ORTHO05D004665 3.5e-177 625.9 666 54.8
PGR142G3363 Punica granatum HOM05D003996 ORTHO05D004665 1.0e-176 624.4 671 53.1
Lj1C780G17 Lonicera japonica HOM05D003996 ORTHO05D004665 3.0e-176 622.9 577 59.6
Glyma.20G056800 Glycine max HOM05D003996 ORTHO05D004665 3.9e-176 622.5 700 52.0
Psat5g111680 Pisum sativum HOM05D003996 ORTHO05D004665 5.0e-176 622.1 672 53.7
FAN05G2256 Fragaria x ananassa HOM05D003996 ORTHO05D004665 1.1e-175 620.9 740 50.9
AL4G28490 Arabidopsis lyrata HOM05D003996 ORTHO05D004665 4.3e-175 619.0 695 49.9
EL10Ac6g13970 Beta vulgaris HOM05D003996 ORTHO05D004665 4.7e-174 615.5 629 53.6
CARHR126920 Cardamine hirsuta HOM05D003996 ORTHO05D004665 1.8e-173 613.6 698 50.0
C03p21510 Brassica napus HOM05D003996 ORTHO05D004665 5.2e-173 612.1 695 49.8
BcaC01g05877 Brassica carinata HOM05D003996 ORTHO05D004665 8.9e-173 611.3 696 49.9
Carub.0004s1441 Capsella rubella HOM05D003996 ORTHO05D004665 1.2e-172 610.9 689 50.4
A03p18420 Brassica napus HOM05D003996 ORTHO05D004665 2.0e-172 610.1 684 50.1
AUR62040130 Chenopodium quinoa HOM05D003996 ORTHO05D004665 4.4e-172 609.0 644 54.2
SalBow7G2067 Salvia bowleyana HOM05D003996 ORTHO05D004665 4.4e-172 609.0 646 53.7
VMungo0540G1114 Vigna mungo HOM05D003996 ORTHO05D004665 4.4e-172 609.0 649 52.2
BolC3t14538H Brassica oleracea HOM05D003996 ORTHO05D004665 9.8e-172 607.8 695 49.5
Ah.03g136730 Amaranthus hybridus HOM05D003996 ORTHO05D004665 1.7e-171 607.1 653 55.0
BcaB01g03955 Brassica carinata HOM05D003996 ORTHO05D004665 2.2e-171 606.7 690 49.4
Migut.M00422 Erythranthe guttata HOM05D003996 ORTHO05D004665 2.2e-171 606.7 649 52.5
Lsat_1_v5_gn_5_124380 Lactuca sativa HOM05D003996 ORTHO05D004665 4.1e-170 602.4 675 52.3
Manes.13G066300 Manihot esculenta HOM05D003996 ORTHO05D004665 3.5e-169 599.4 600 54.7
Aa31LG5G4630 Aethionema arabicum HOM05D003996 ORTHO05D004665 1.7e-168 597.0 679 50.1
MD17G1103800 Malus domestica HOM05D003996 ORTHO05D004665 1.5e-167 594.0 751 50.1
HanXRQChr10g0306531 Helianthus annuus HOM05D003996 ORTHO05D004665 1.6e-166 590.5 654 51.7
SGA_v2.0_scaffold70G23382 Striga asiatica HOM05D003996 ORTHO05D004665 8.1e-166 588.2 663 51.0
Nn1g03381 Nelumbo nucifera HOM05D003996 ORTHO05D004665 1.4e-165 587.4 694 49.4
Zm00001eb256350 Zea mays HOM05D003996 ORTHO05D004665 2.2e-163 580.1 670 49.9
Haze_12770 Corylus avellana HOM05D003996 ORTHO05D004665 3.2e-162 576.2 563 57.0
Lj8A129T88 Lonicera japonica HOM05D003996 ORTHO05D004665 5.4e-162 575.5 672 51.5
A05p12660 Brassica napus HOM05D003996 ORTHO05D004665 2.5e-159 566.6 674 48.1
BraA05t20204Z Brassica rapa HOM05D003996 ORTHO05D004665 5.6e-159 565.5 676 48.1
Sabra02G0172000 Salix brachista HOM05D003996 ORTHO05D004665 1.6e-158 563.9 723 47.2
Lsat_1_v5_gn_9_105800 Lactuca sativa HOM05D003996 ORTHO05D004665 9.9e-156 554.7 654 51.4
arahy.Tifrunner.gnm1.ann1.ZWYX82 Arachis hypogaea HOM05D003996 ORTHO05D004665 1.9e-154 550.4 628 51.9
DCAR_023146 Daucus carota HOM05D003996 ORTHO05D004665 7.1e-154 548.5 691 49.3
C04p16550 Brassica napus HOM05D003996 ORTHO05D004665 3.5e-153 546.2 685 46.1
BcaC02g11363 Brassica carinata HOM05D003996 ORTHO05D004665 6.0e-153 545.4 685 46.1
HPP92_010852 Vanilla planifolia HOM05D003996 ORTHO05D004665 3.0e-152 543.1 674 48.2
Os02g0771800 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 6.6e-152 542.0 656 47.4
BolC4t23207H Brassica oleracea HOM05D003996 ORTHO05D004665 2.5e-151 540.0 689 46.6
Glyma.13G026700 Glycine max HOM05D003996 ORTHO05D004665 7.6e-148 528.5 468 60.7
SHI10040 Sapria himalayana HOM05D003996 ORTHO05D000023 1.0e-144 518.1 705 45.4
Sed0016081 Sechium edule HOM05D003996 ORTHO05D004665 1.5e-143 514.2 608 49.5
CDE07G0144 Ceratophyllum demersum HOM05D003996 ORTHO05D004665 2.1e-142 510.4 706 45.2
BraA03t11105Z Brassica rapa HOM05D003996 ORTHO05D004665 3.4e-140 503.1 662 45.2
Sc06g0009640 Simmondsia chinensis HOM05D003996 ORTHO05D004665 1.4e-133 481.1 478 55.4
CiPaw.04G110600 Carya illinoinensis HOM05D003996 ORTHO05D004665 1.8e-128 464.2 485 51.5
unitig_26.g9924 Utricularia gibba HOM05D003996 ORTHO05D004665 7.6e-124 448.7 504 51.6
Sc05g0002040 Simmondsia chinensis HOM05D003996 ORTHO05D004665 1.1e-117 428.3 658 43.0
BcaNung06410 Brassica carinata HOM05D003996 ORTHO05D004665 8.5e-115 418.7 671 40.7
SEGI_14118 Sequoiadendron giganteum HOM05D003996 ORTHO05D004665 3.9e-112 409.8 756 37.4
BcaB02g10511 Brassica carinata HOM05D003996 ORTHO05D004665 7.7e-108 395.6 482 47.1
CANSAT01G0074 Cannabis sativa HOM05D003996 ORTHO05D004665 1.1e-103 381.7 658 38.8
AUR62001107 Chenopodium quinoa HOM05D003996 ORTHO05D004665 2.0e-103 380.9 679 38.4
EL10Ac7g17863 Beta vulgaris HOM05D003996 ORTHO05D004665 4.8e-102 376.3 665 39.4
COL.COLO4_21871 Corchorus olitorius HOM05D003996 ORTHO05D004665 2.4e-101 374.0 381 55.6
AUR62008931 Chenopodium quinoa HOM05D003996 ORTHO05D004665 1.7e-99 367.9 708 37.9
Pp3c17_9940 Physcomitrium patens HOM05D003996 ORTHO05D004665 6.7e-96 355.9 742 36.4
Hund18404 Selenicereus undatus HOM05D003996 ORTHO05D004665 6.7e-96 355.9 667 37.9
Duzib133G0500 Durio zibethinus HOM05D003996 ORTHO05D004665 1.5e-95 354.8 650 38.0
Pp3c9_1750 Physcomitrium patens HOM05D003996 ORTHO05D004665 7.0e-93 345.9 770 34.8
CiPaw.03G155400 Carya illinoinensis HOM05D003996 ORTHO05D004665 4.5e-92 343.2 393 51.7
GSVIVG01003286001 Vitis vinifera HOM05D003996 ORTHO05D004665 2.2e-91 340.9 640 37.8
SMO361G0133 Selaginella moellendorffii HOM05D003996 ORTHO05D004665 4.4e-87 326.6 680 35.9
CANSAT01G3237 Cannabis sativa HOM05D003996 ORTHO05D004665 2.7e-84 317.4 506 39.1
Mapoly0071s0059 Marchantia polymorpha HOM05D003996 ORTHO05D004665 1.9e-82 311.2 815 31.5
AagrBONN_evm.TU.Sc2ySwM_368.1061 Anthoceros agrestis HOM05D003996 ORTHO05D004665 5.2e-80 303.1 747 32.5
Manes.13G046600 Manihot esculenta HOM05D003996 ORTHO05D004665 1.7e-78 298.1 511 38.6
Zm00001eb297890 Zea mays HOM05D003996 ORTHO05D004665 2.8e-78 297.4 522 37.5
CiPaw.03G155500 Carya illinoinensis HOM05D003996 ORTHO05D004665 5.2e-72 276.6 225 62.7
COL.COLO4_21870 Corchorus olitorius HOM05D003996 ORTHO05D004665 8.9e-72 275.8 221 63.3
Cpa.g.sc132.19 Carica papaya HOM05D003996 ORTHO05D004665 6.3e-70 269.6 297 52.2
Ah.08g214450 Amaranthus hybridus HOM05D003996 ORTHO05D004665 1.6e-68 265.0 547 36.2
Hund05567 Selenicereus undatus HOM05D003996 ORTHO05D004665 3.5e-68 263.8 502 35.3
HPP92_011782 Vanilla planifolia HOM05D003996 ORTHO05D004665 1.1e-66 258.8 355 44.5
CBR_g29855 Chara braunii HOM05D003996 ORTHO05D004665 3.0e-51 207.6 340 38.2
Actinidia03596 Actinidia chinensis HOM05D003996 ORTHO05D004665 1.0e-35 156.0 284 36.6
Actinidia03595 Actinidia chinensis HOM05D003996 ORTHO05D004665 1.8e-32 145.2 109 67.9
Thecc.01G223400 Theobroma cacao HOM05D003996 ORTHO05D004665 1.1e-26 125.9 190 39.5
Actinidia03594 Actinidia chinensis HOM05D003996 ORTHO05D004665 6.9e-24 116.7 110 55.5
CiPaw.04G110700 Carya illinoinensis HOM05D003996 ORTHO05D004665 8.4e-22 109.8 68 80.9
Hund15378 Selenicereus undatus HOM05D003996 ORTHO05D004665 7.9e-20 103.2 106 53.8
C09p40870 Brassica napus HOM05D003996 ORTHO05D004665 1.5e-15 89.0 66 65.2
unitig_26.g9925 Utricularia gibba HOM05D003996 ORTHO05D004665 4.9e-14 84.0 47 80.9
Cre12.g513852 Chlamydomonas reinhardtii HOM05D003996 ORTHO05D004665 7.9e-12 76.6 169 35.5
Os05g0597400 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 1.5e-10 72.4 54 57.4
MCO15G069 Micromonas commoda HOM05D003996 ORTHO05D004665 1.6e-09 68.9 153 34.0
Ah.08g214440 Amaranthus hybridus HOM05D003996 ORTHO05D004665 1.4e-08 65.9 97 43.3
BcaC09g50171 Brassica carinata HOM05D003996 ORTHO05D092235 2.6e-07 61.6 48 62.5


User provided reference genes

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