Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008802g0020 Nicotiana tabacum HOM05D006030 ORTHO05D007475 2.5e-173 612.1 320 100.0
Nitab4.5_0000315g0160 Nicotiana tabacum HOM05D006030 ORTHO05D007475 3.4e-170 601.7 322 98.1
Peaxi162Scf00045g00235 Petunia axillaris HOM05D000253 ORTHO05D000149 1.5e-154 549.7 319 89.7
Solyc08g023270.3 Solanum lycopersicum HOM05D006030 ORTHO05D007475 3.2e-144 515.4 321 86.3
Sopen08g008180 Solanum pennellii HOM05D006030 ORTHO05D007475 3.2e-144 515.4 321 86.3
PGSC0003DMG400005380 Solanum tuberosum HOM05D006030 ORTHO05D007475 5.1e-142 508.1 321 84.4
CAN.G36.30 Capsicum annuum HOM05D006030 ORTHO05D007475 1.6e-140 503.1 321 84.7
Peaxi162Scf00333g00215 Petunia axillaris HOM05D006030 ORTHO05D007475 2.4e-115 419.5 298 73.2
Nitab4.5_0002900g0020 Nicotiana tabacum HOM05D006030 ORTHO05D007475 1.3e-113 413.7 320 69.1
Nitab4.5_0000717g0050 Nicotiana tabacum HOM05D006030 ORTHO05D007475 4.2e-112 408.7 320 68.8
Hma1.2p1_0689F.1_g203740 Hydrangea macrophylla HOM05D006030 ORTHO05D007475 1.8e-102 376.7 323 65.3
Dinv21492 Davidia involucrata HOM05D006030 ORTHO05D007475 1.5e-101 373.6 321 64.8
CSS0019216 Camellia sinensis var. sinensis HOM05D006030 ORTHO05D007475 6.3e-100 368.2 320 62.5
CSS0008742 Camellia sinensis var. sinensis HOM05D006030 ORTHO05D007475 1.0e-94 350.9 320 58.8
Rhsim02G0159700 Rhododendron simsii HOM05D006030 ORTHO05D007475 1.8e-94 350.1 321 60.1
MSTRG.14783 Avicennia marina HOM05D006030 ORTHO05D007475 3.9e-94 349.0 332 61.7
CSS0023088 Camellia sinensis var. sinensis HOM05D006030 ORTHO05D007475 3.3e-93 345.9 320 60.3
Actinidia39595 Actinidia chinensis HOM05D006030 ORTHO05D007475 4.3e-93 345.5 321 59.5
TAR627G0722 Trochodendron aralioides HOM05D006030 ORTHO05D007475 9.1e-91 337.8 322 58.1
Cc09_g08600 Coffea canephora HOM05D006030 ORTHO05D007475 1.0e-89 334.3 324 60.8
Ciclev10015995m.g Citrus clementina HOM05D006030 ORTHO05D007475 2.3e-86 323.2 321 57.6
PGSC0003DMG400031336 Solanum tuberosum HOM05D006030 ORTHO05D007475 5.7e-85 318.5 296 61.5
Sopen02g005930 Solanum pennellii HOM05D006030 ORTHO05D007475 7.4e-85 318.2 296 61.1
Lj2A324T65 Lonicera japonica HOM05D006030 ORTHO05D007475 9.7e-85 317.8 322 57.5
Solyc02g021450.2 Solanum lycopersicum HOM05D006030 ORTHO05D007475 6.3e-84 315.1 296 60.5
Atru.chr10.1031 Acer truncatum HOM05D006030 ORTHO05D007475 9.1e-83 311.2 327 56.0
Migut.H01344 Erythranthe guttata HOM05D006030 ORTHO05D007475 1.2e-82 310.8 337 56.4
ECA236G5152 Erigeron canadensis HOM05D006030 ORTHO05D007475 5.9e-82 308.5 306 56.2
SalBow7G1462 Salvia bowleyana HOM05D006030 ORTHO05D007475 5.9e-82 308.5 339 53.1
SalBow7G3121 Salvia bowleyana HOM05D006030 ORTHO05D007475 5.9e-82 308.5 339 53.1
MD10G1256000 Malus domestica HOM05D006030 ORTHO05D007475 1.7e-81 307.0 318 56.0
TAR624G0353 Trochodendron aralioides HOM05D006030 ORTHO05D007475 1.7e-81 307.0 320 54.4
Prupe.4G087600 Prunus persica HOM05D006030 ORTHO05D007475 2.1e-79 300.1 318 55.0
Potri.011G091700 Populus trichocarpa HOM05D006030 ORTHO05D007475 1.4e-78 297.4 321 56.7
MBI18_g10587_MAGBIO Magnolia biondii HOM05D006030 ORTHO05D007475 3.9e-78 295.8 322 51.9
DCAR_007858 Daucus carota HOM05D006030 ORTHO05D007475 5.2e-78 295.4 303 56.1
Lj1A1167T61 Lonicera japonica HOM05D006030 ORTHO05D007475 5.2e-78 295.4 307 56.0
Cfa000873 Carpinus fangiana HOM05D006030 ORTHO05D007475 1.1e-77 294.3 309 56.3
HanXRQChr04g0112111 Helianthus annuus HOM05D006030 ORTHO05D007475 1.5e-77 293.9 307 53.7
CiPaw.09G117700 Carya illinoinensis HOM05D006030 ORTHO05D007475 4.4e-77 292.4 323 53.3
MD05G1060100 Malus domestica HOM05D006030 ORTHO05D007475 4.8e-76 288.9 290 56.9
TWI09G0666 Tripterygium wilfordii HOM05D006030 ORTHO05D007475 1.1e-75 287.7 298 55.0
DCAR_027876 Daucus carota HOM05D006030 ORTHO05D007475 1.4e-75 287.3 299 55.9
Haze_05717 Corylus avellana HOM05D006030 ORTHO05D007475 2.4e-75 286.6 302 55.6
HanXRQChr15g0481561 Helianthus annuus HOM05D006030 ORTHO05D007475 4.1e-75 285.8 314 53.5
Sabra11G0085900 Salix brachista HOM05D006030 ORTHO05D007475 3.5e-74 282.7 317 54.6
Thecc.02G010100 Theobroma cacao HOM05D006030 ORTHO05D007475 1.7e-73 280.4 304 55.3
TPR.G26249 Trifolium pratense HOM05D006030 ORTHO05D007475 1.7e-73 280.4 300 52.7
Lalb_Chr15g0086701 Lupinus albus HOM05D006030 ORTHO05D007475 2.9e-73 279.6 297 55.2
QL05p054330 Quercus lobata HOM05D006030 ORTHO05D007475 2.9e-73 279.6 325 52.3
SalBow8G3821 Salvia bowleyana HOM05D006030 ORTHO05D007475 8.5e-73 278.1 298 53.7
Manes.15G125900 Manihot esculenta HOM05D006030 ORTHO05D007475 1.9e-72 276.9 318 53.1
Lalb_Chr20g0117731 Lupinus albus HOM05D006030 ORTHO05D007475 2.5e-72 276.6 299 53.8
TWI53G0643 Tripterygium wilfordii HOM05D006030 ORTHO05D007475 3.2e-72 276.2 298 54.4
Psat1g191320 Pisum sativum HOM05D006030 ORTHO05D007475 3.6e-71 272.7 300 51.0
Ca_00520_v3 Cicer arietinum L. HOM05D006030 ORTHO05D007475 1.8e-70 270.4 297 51.9
Lsat_1_v5_gn_1_116040 Lactuca sativa HOM05D006030 ORTHO05D007475 1.8e-70 270.4 299 53.2
Medtr2g018890 Medicago truncatula HOM05D006030 ORTHO05D007475 1.8e-70 270.4 301 51.5
Lalb_Chr18g0055221 Lupinus albus HOM05D006030 ORTHO05D007475 5.2e-70 268.9 297 53.2
MSTRG.13261 Avicennia marina HOM05D006030 ORTHO05D007475 8.8e-70 268.1 333 50.5
FAN11G1717 Fragaria x ananassa HOM05D006030 ORTHO05D007475 1.5e-69 267.3 318 52.2
Lj6g0008094 Lotus japonicus HOM05D006030 ORTHO05D007475 1.5e-69 267.3 302 51.0
FvH4_3g09520 Fragaria vesca HOM05D006030 ORTHO05D007475 2.0e-69 266.9 318 52.2
FAN16G0477 Fragaria x ananassa HOM05D006030 ORTHO05D007475 9.7e-69 264.6 316 52.5
FAN21G0577 Fragaria x ananassa HOM05D006030 ORTHO05D007475 1.1e-67 261.2 318 52.5
FAN25G1233 Fragaria x ananassa HOM05D006030 ORTHO05D007475 1.1e-67 261.2 313 51.4
RcHm_v2.0_Chr5g0015101 Rosa chinensis HOM05D006030 ORTHO05D007475 4.1e-67 259.2 320 51.9
SGA_v2.0_scaffold51G18644 Striga asiatica HOM05D006030 ORTHO05D007475 2.7e-66 256.5 295 52.2
Duzib132G1046 Durio zibethinus HOM05D006030 ORTHO05D007475 2.2e-65 253.4 294 52.4
Phvul.006G167100 Phaseolus vulgaris HOM05D006030 ORTHO05D007475 6.5e-65 251.9 303 49.5
Glyma.15G092100 Glycine max HOM05D006030 ORTHO05D007475 8.5e-65 251.5 304 50.3
Duzib052G0461 Durio zibethinus HOM05D006030 ORTHO05D007475 7.2e-64 248.4 286 54.2
Lsat_1_v5_gn_7_32280 Lactuca sativa HOM05D006030 ORTHO05D007475 2.1e-63 246.9 301 50.2
Glyma.13G220300 Glycine max HOM05D006030 ORTHO05D007475 3.6e-63 246.1 306 50.7
Manes.17G075000 Manihot esculenta HOM05D006030 ORTHO05D007475 6.1e-63 245.4 312 47.8
DCAR_003876 Daucus carota HOM05D006030 ORTHO05D007475 8.0e-63 245.0 254 56.3
Eucgr.E02463 Eucalyptus grandis HOM05D006030 ORTHO05D007475 4.0e-62 242.7 257 55.6
MELO3C002779.2 Cucumis melo HOM05D006030 ORTHO05D007475 6.8e-62 241.9 319 47.6
CANSAT35G1388 Cannabis sativa HOM05D006030 ORTHO05D007475 8.8e-62 241.5 346 46.0
ClCG03G006430 Citrullus lanatus HOM05D006030 ORTHO05D007475 4.4e-61 239.2 320 48.4
Sp6g03610 Schrenkiella parvula HOM05D006030 ORTHO05D007475 7.5e-61 238.4 313 45.4
VMungo0540G2189 Vigna mungo HOM05D006030 ORTHO05D007475 7.5e-61 238.4 302 48.3
CARHR252040 Cardamine hirsuta HOM05D006030 ORTHO05D007475 9.8e-61 238.0 312 44.2
CsaV3_1G036960 Cucumis sativus L. HOM05D006030 ORTHO05D007475 1.3e-60 237.7 301 47.8
Aqoxy1G01654 Aquilegia oxysepala HOM05D006030 ORTHO05D007475 1.7e-60 237.3 300 49.3
COL.COLO4_17663 Corchorus olitorius HOM05D006030 ORTHO05D007475 2.2e-60 236.9 285 49.8
PSO541G2924 Papaver somniferum HOM05D006030 ORTHO05D007475 8.3e-60 235.0 299 49.5
Thhalv10029201m.g Eutrema salsugineum HOM05D006030 ORTHO05D007475 2.4e-59 233.4 314 44.9
Sc05g0005830 Simmondsia chinensis HOM05D006030 ORTHO05D007475 2.4e-59 233.4 299 47.8
BcaB01g01909 Brassica carinata HOM05D006030 ORTHO05D007475 9.1e-59 231.5 310 46.1
Aa31LG9G8890 Aethionema arabicum HOM05D006030 ORTHO05D007475 1.2e-58 231.1 312 44.9
A09p02880 Brassica napus HOM05D006030 ORTHO05D007475 1.6e-58 230.7 312 45.8
PGR031G1516 Punica granatum HOM05D006030 ORTHO05D007475 2.0e-58 230.3 255 55.7
BraA09t35933Z Brassica rapa HOM05D006030 ORTHO05D007475 2.7e-58 229.9 311 45.3
Sed0012497 Sechium edule HOM05D006030 ORTHO05D007475 2.7e-58 229.9 297 48.1
C09p02960 Brassica napus HOM05D006030 ORTHO05D007475 4.5e-58 229.2 311 45.3
Sed0007526 Sechium edule HOM05D006030 ORTHO05D007475 5.9e-58 228.8 300 46.7
arahy.Tifrunner.gnm1.ann1.IB7BS1 Arachis hypogaea HOM05D006030 ORTHO05D007475 1.0e-57 228.0 305 46.2
Nn4g26650 Nelumbo nucifera HOM05D006030 ORTHO05D007475 1.0e-57 228.0 291 46.7
AL6G49160 Arabidopsis lyrata HOM05D006030 ORTHO05D007475 1.3e-57 227.6 315 44.4
arahy.Tifrunner.gnm1.ann1.Z0KP5S Arachis hypogaea HOM05D006030 ORTHO05D007475 1.3e-57 227.6 305 46.2
AT4G03620 Arabidopsis thaliana HOM05D006030 ORTHO05D007475 2.9e-57 226.5 317 43.8
PSO675G1541 Papaver somniferum HOM05D006030 ORTHO05D007475 2.9e-57 226.5 299 48.5
Carub.0006s3344 Capsella rubella HOM05D006030 ORTHO05D007475 5.0e-57 225.7 315 43.5
BcaC04g23958 Brassica carinata HOM05D006030 ORTHO05D007475 1.1e-56 224.6 300 46.3
BolC9t53223H Brassica oleracea HOM05D006030 ORTHO05D007475 1.1e-56 224.6 300 46.3
AUR62030127 Chenopodium quinoa HOM05D006030 ORTHO05D007475 7.2e-56 221.9 309 43.7
EL10Ac8g19610 Beta vulgaris HOM05D006030 ORTHO05D007475 1.4e-54 217.6 301 44.5
Hund21555 Selenicereus undatus HOM05D006030 ORTHO05D007475 3.0e-54 216.5 308 45.1
AUR62002659 Chenopodium quinoa HOM05D006030 ORTHO05D007475 1.5e-53 214.2 303 43.6
PSO541G2932 Papaver somniferum HOM05D006030 ORTHO05D007475 1.5e-53 214.2 307 46.3
MBI02_g11375_MAGBIO Magnolia biondii HOM05D006030 ORTHO05D007475 2.6e-53 213.4 283 43.8
THA.LOC104806979 Tarenaya hassleriana HOM05D006030 ORTHO05D007475 8.3e-52 208.4 313 41.5
Nn3g20281 Nelumbo nucifera HOM05D006030 ORTHO05D007475 1.1e-51 208.0 267 46.1
PSO675G3639 Papaver somniferum HOM05D006030 ORTHO05D007475 7.8e-50 201.8 307 44.3
Ah.09g232450 Amaranthus hybridus HOM05D006030 ORTHO05D007475 5.7e-45 185.7 273 42.5
arahy.Tifrunner.gnm1.ann1.TN2AI9 Arachis hypogaea HOM05D006030 ORTHO05D007475 7.5e-45 185.3 281 42.0
arahy.Tifrunner.gnm1.ann1.DKT922 Arachis hypogaea HOM05D006030 ORTHO05D007475 1.3e-44 184.5 281 41.6
GSVIVG01021577001 Vitis vinifera HOM05D006030 ORTHO05D007475 2.9e-44 183.3 209 53.1
Peaxi162Scf00333g00214 Petunia axillaris HOM05D006030 ORTHO05D007475 1.7e-36 157.5 118 70.3
Migut.M01870 Erythranthe guttata HOM05D006030 ORTHO05D007475 2.4e-35 153.7 128 66.4
Cpa.g.sc17.66 Carica papaya HOM05D006030 ORTHO05D007475 3.9e-33 146.4 164 51.8
HPP92_019506 Vanilla planifolia HOM05D006030 ORTHO05D007475 1.9e-27 127.5 305 36.1
ATR0626G038 Amborella trichopoda HOM05D006030 ORTHO05D007475 2.4e-27 127.1 222 37.8
unitig_37.g12083 Utricularia gibba HOM05D006030 ORTHO05D007475 4.1e-27 126.3 177 48.0
SEGI_26103 Sequoiadendron giganteum HOM05D006030 ORTHO05D007475 2.5e-16 90.5 177 38.4
Nn1g09396 Nelumbo nucifera HOM05D006030 ORTHO05D007475 3.4e-13 80.1 163 33.7
Duzib248G1648 Durio zibethinus HOM05D006030 ORTHO05D007475 7.1e-11 72.4 143 39.2
SGA_v2.0_scaffold106G30660 Striga asiatica HOM05D006030 ORTHO05D007475 8.7e-09 65.5 89 43.8
Actinidia26538 Actinidia chinensis HOM05D006030 ORTHO05D007475 7.3e-08 62.4 95 42.1


User provided reference genes

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