Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007891g0010 Nicotiana tabacum HOM05D007750 ORTHO05D009803 3.2e-44 183.7 86 100.0
Nitab4.5_0001714g0210 Nicotiana tabacum HOM05D007750 ORTHO05D009803 2.2e-37 161.0 85 89.4
PGSC0003DMG400022754 Solanum tuberosum HOM05D007750 ORTHO05D009803 6.7e-34 149.4 85 82.4
Sopen08g028580 Solanum pennellii HOM05D007750 ORTHO05D009803 1.9e-33 147.9 85 82.4
CAN.G981.43 Capsicum annuum HOM05D007750 ORTHO05D009803 1.2e-30 138.7 84 78.6
Rhsim13G0082600 Rhododendron simsii HOM05D007750 ORTHO05D009803 5.7e-25 119.8 85 61.2
CSS0037746 Camellia sinensis var. sinensis HOM05D007750 ORTHO05D009803 7.4e-25 119.4 85 61.2
CSS0028051 Camellia sinensis var. sinensis HOM05D007750 ORTHO05D009803 4.8e-24 116.7 84 60.7
Haze_24099 Corylus avellana HOM05D007750 ORTHO05D009803 4.1e-23 113.6 85 58.8
Cfa011507 Carpinus fangiana HOM05D007750 ORTHO05D009803 9.0e-23 112.5 85 58.8
Atru.chr3.3911 Acer truncatum HOM05D007750 ORTHO05D009803 1.0e-21 109.0 85 56.5
FAN25G2068 Fragaria x ananassa HOM05D007750 ORTHO05D009803 1.3e-21 108.6 86 51.2
RcHm_v2.0_Chr5g0064911 Rosa chinensis HOM05D007750 ORTHO05D009803 1.7e-21 108.2 86 53.5
FvH4_3g36170 Fragaria vesca HOM05D007750 ORTHO05D009803 2.2e-21 107.8 86 52.3
FAN11G0214 Fragaria x ananassa HOM05D007750 ORTHO05D009803 2.2e-21 107.8 86 52.3
FAN21G3841 Fragaria x ananassa HOM05D007750 ORTHO05D009803 2.2e-21 107.8 86 51.2
FAN16G0393 Fragaria x ananassa HOM05D007750 ORTHO05D009803 2.9e-21 107.5 86 51.2
QL01p031803 Quercus lobata HOM05D007750 ORTHO05D009803 3.8e-21 107.1 85 56.5
CiPaw.13G094000 Carya illinoinensis HOM05D007750 ORTHO05D009803 1.1e-20 105.5 85 56.5
MD03G1092900 Malus domestica HOM05D007750 ORTHO05D009803 1.4e-20 105.1 86 53.5
Lj1P153T20 Lonicera japonica HOM05D007750 ORTHO05D009803 2.5e-20 104.4 86 52.3
CANSAT54G1947 Cannabis sativa HOM05D007750 ORTHO05D009803 4.2e-20 103.6 85 51.8
Migut.N02392 Erythranthe guttata HOM05D007750 ORTHO05D009803 7.2e-20 102.8 85 47.1
Cpa.g.sc81.142 Carica papaya HOM05D007750 ORTHO05D009803 9.4e-20 102.4 84 52.4
Gohir.D03G125600 Gossypium hirsutum HOM05D007750 ORTHO05D009803 9.4e-20 102.4 84 57.1
Gorai.003G131800 Gossypium raimondii HOM05D007750 ORTHO05D009803 9.4e-20 102.4 84 57.1
Thecc.09G321000 Theobroma cacao HOM05D007750 ORTHO05D009803 1.6e-19 101.7 85 55.3
Gohir.A03G042099 Gossypium hirsutum HOM05D007750 ORTHO05D009803 2.1e-19 101.3 84 56.0
TAR623G1496 Trochodendron aralioides HOM05D007750 ORTHO05D009803 2.1e-19 101.3 86 53.5
Lalb_Chr12g0196171 Lupinus albus HOM05D007750 ORTHO05D009803 2.7e-19 100.9 85 56.5
GSVIVG01024955001 Vitis vinifera HOM05D007750 ORTHO05D009803 2.7e-19 100.9 84 54.8
Thhalv10028537m.g Eutrema salsugineum HOM05D007750 ORTHO05D009803 4.6e-19 100.1 85 51.8
Manes.02G132900 Manihot esculenta HOM05D007750 ORTHO05D009803 6.1e-19 99.8 81 56.8
RcHm_v2.0_Chr5g0064671 Rosa chinensis HOM05D007750 ORTHO05D009803 6.1e-19 99.8 86 52.3
Prupe.6G076800 Prunus persica HOM05D007750 ORTHO05D009803 1.4e-18 98.6 84 52.4
CARHR254670 Cardamine hirsuta HOM05D007750 ORTHO05D009803 1.8e-18 98.2 85 51.8
Lj2g0016115 Lotus japonicus HOM05D007750 ORTHO05D009803 2.3e-18 97.8 85 50.6
AL6G46300 Arabidopsis lyrata HOM05D007750 ORTHO05D009803 3.0e-18 97.4 85 50.6
AL6G46430 Arabidopsis lyrata HOM05D007750 ORTHO05D009803 3.0e-18 97.4 85 50.6
A09p27430 Brassica napus HOM05D007750 ORTHO05D009803 3.9e-18 97.1 86 51.2
Ca_04398_v3 Cicer arietinum L. HOM05D007750 ORTHO05D009803 3.9e-18 97.1 85 52.9
Duzib150G0757 Durio zibethinus HOM05D007750 ORTHO05D009803 5.1e-18 96.7 85 52.9
Psat1g083360 Pisum sativum HOM05D007750 ORTHO05D009803 6.7e-18 96.3 85 51.8
BraA09t38312Z Brassica rapa HOM05D007750 ORTHO05D009803 8.8e-18 95.9 86 50.0
Sabra17G0109600 Salix brachista HOM05D007750 ORTHO05D009803 8.8e-18 95.9 85 49.4
SalBow3G4043 Salvia bowleyana HOM05D007750 ORTHO05D009803 8.8e-18 95.9 84 48.8
THA.LOC104801704 Tarenaya hassleriana HOM05D007750 ORTHO05D009803 1.1e-17 95.5 85 51.8
C09p34750 Brassica napus HOM05D007750 ORTHO05D009803 1.5e-17 95.1 86 50.0
BolC9t56321H Brassica oleracea HOM05D007750 ORTHO05D009803 1.5e-17 95.1 86 50.0
Carub.0006s3078 Capsella rubella HOM05D007750 ORTHO05D009803 2.0e-17 94.7 85 49.4
Cc01_g12900 Coffea canephora HOM05D007750 ORTHO05D009803 2.0e-17 94.7 85 50.6
COL.COLO4_18513 Corchorus olitorius HOM05D007750 ORTHO05D009803 2.0e-17 94.7 84 52.4
Medtr6g022260 Medicago truncatula HOM05D007750 ORTHO05D009803 2.5e-17 94.4 84 52.4
TPR.G7494 Trifolium pratense HOM05D007750 ORTHO05D009803 2.5e-17 94.4 85 50.6
Nn1g04208 Nelumbo nucifera HOM05D007750 ORTHO05D009803 7.4e-17 92.8 83 49.4
Phvul.003G092000 Phaseolus vulgaris HOM05D007750 ORTHO05D009803 7.4e-17 92.8 85 50.6
Aa31LG9G10670 Aethionema arabicum HOM05D007750 ORTHO05D009803 1.3e-16 92.0 84 48.8
Aqoxy7G03815 Aquilegia oxysepala HOM05D007750 ORTHO05D009803 1.3e-16 92.0 85 49.4
arahy.Tifrunner.gnm1.ann1.7C1NTJ Arachis hypogaea HOM05D007750 ORTHO05D009803 1.3e-16 92.0 77 54.5
VMungo1215G1573 Vigna mungo HOM05D007750 ORTHO05D009803 1.7e-16 91.7 84 50.0
Aqoxy496s001 Aquilegia oxysepala HOM05D007750 ORTHO05D009803 2.2e-16 91.3 85 49.4
Aqoxy4G02931 Aquilegia oxysepala HOM05D007750 ORTHO05D009803 2.2e-16 91.3 85 49.4
Glyma.07G217200 Glycine max HOM05D007750 ORTHO05D009803 2.2e-16 91.3 85 52.9
EL10Ac5g12003 Beta vulgaris HOM05D007750 ORTHO05D009803 2.8e-16 90.9 85 45.9
Phvul.003G091900 Phaseolus vulgaris HOM05D007750 ORTHO05D009803 2.8e-16 90.9 85 49.4
Glyma.06G033500 Glycine max HOM05D007750 ORTHO05D009803 3.7e-16 90.5 85 51.8
Sp6g05780 Schrenkiella parvula HOM05D007750 ORTHO05D009803 6.3e-16 89.7 82 50.0
AUR62018631 Chenopodium quinoa HOM05D007750 ORTHO05D009803 8.2e-16 89.4 85 50.6
Oeu012315.1 Olea europaea HOM05D007750 ORTHO05D009803 8.2e-16 89.4 86 44.2
SGA_v2.0_scaffold9G04983 Striga asiatica HOM05D007750 ORTHO05D009803 1.1e-15 89.0 84 46.4
arahy.Tifrunner.gnm1.ann1.T5BWJF Arachis hypogaea HOM05D007750 ORTHO05D009803 2.6e-14 84.3 81 49.4
Hma1.2p1_0418F.1_g149220 Hydrangea macrophylla HOM05D007750 ORTHO05D009803 4.5e-14 83.6 59 61.0
PGR083G0657 Punica granatum HOM05D007750 ORTHO05D009803 4.5e-14 83.6 86 47.7
Glyma.17G016400 Glycine max HOM05D007750 ORTHO05D009803 1.0e-13 82.4 85 48.2
ClCG09G016230 Citrullus lanatus HOM05D007750 ORTHO05D009803 1.7e-13 81.6 85 42.4
MBI14_g36920_MAGBIO Magnolia biondii HOM05D002509 ORTHO05D002758 2.2e-13 81.3 85 41.2
Eucgr.H02967 Eucalyptus grandis HOM05D007750 ORTHO05D009803 8.5e-13 79.3 86 40.7
Sc21g0005800 Simmondsia chinensis HOM05D007750 ORTHO05D009803 1.6e-11 75.1 84 42.9
CsaV3_7G007090 Cucumis sativus L. HOM05D007750 ORTHO05D009803 1.8e-10 71.6 81 40.7
Potri.017G131600 Populus trichocarpa HOM05D007750 ORTHO05D009803 2.0e-09 68.2 85 41.2
Glyma.07G257600 Glycine max HOM05D007750 ORTHO05D009803 1.7e-08 65.1 61 50.8
ATR0559G149 Amborella trichopoda HOM05D007750 ORTHO05D009803 2.2e-08 64.7 84 36.9
BcaB01g01674 Brassica carinata HOM05D007750 ORTHO05D009803 2.8e-08 64.3 67 43.3
AT4G11690 Arabidopsis thaliana HOM05D007750 ORTHO05D009803 3.7e-08 63.9 82 37.8


User provided reference genes

Program Settings