Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007717g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 1.5e-130 469.5 240 100.0
Nitab4.5_0001495g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 1.1e-122 443.4 240 94.2
Peaxi162Scf00171g00006 Petunia axillaris HOM05D004487 ORTHO05D005483 1.1e-104 383.6 243 81.1
Sopen03g029710 Solanum pennellii HOM05D004487 ORTHO05D005483 1.5e-101 373.2 231 83.1
PGSC0003DMG400015213 Solanum tuberosum HOM05D004487 ORTHO05D005483 9.5e-101 370.5 231 82.7
Solyc03g019910.3 Solanum lycopersicum HOM05D004487 ORTHO05D005483 5.2e-99 364.8 231 81.8
CAN.G861.28 Capsicum annuum HOM05D004487 ORTHO05D005483 6.3e-97 357.8 229 80.8
Nitab4.5_0000477g0120 Nicotiana tabacum HOM05D004487 ORTHO05D005483 1.2e-74 283.9 240 66.7
QL06p033465 Quercus lobata HOM05D004487 ORTHO05D005483 6.4e-73 278.1 233 63.9
GSVIVG01022203001 Vitis vinifera HOM05D004487 ORTHO05D005483 8.3e-73 277.7 241 63.1
Migut.H01422 Erythranthe guttata HOM05D004487 ORTHO05D005483 1.1e-72 277.3 235 62.1
Nn8g40276 Nelumbo nucifera HOM05D004487 ORTHO05D005483 6.0e-71 271.6 238 62.6
MSTRG.14740 Avicennia marina HOM05D004487 ORTHO05D005483 1.0e-70 270.8 237 61.6
Oeu040918.3 Olea europaea HOM05D004487 ORTHO05D005483 3.0e-70 269.2 287 54.4
Nn2g14563 Nelumbo nucifera HOM05D004487 ORTHO05D005483 1.9e-69 266.5 238 62.2
Haze_05964 Corylus avellana HOM05D004487 ORTHO05D005483 2.5e-69 266.2 266 57.5
TAR625G1215 Trochodendron aralioides HOM05D004487 ORTHO05D005483 5.6e-69 265.0 241 62.2
Ciclev10026392m.g Citrus clementina HOM05D004487 ORTHO05D005483 7.3e-69 264.6 235 59.6
vmacro18624 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 1.1e-67 260.8 235 60.0
Thecc.01G110300 Theobroma cacao HOM05D004487 ORTHO05D005483 3.1e-67 259.2 241 56.8
COL.COLO4_11036 Corchorus olitorius HOM05D004487 ORTHO05D005483 4.0e-67 258.8 236 58.1
vmacro21317 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 2.0e-66 256.5 225 61.3
CiPaw.04G093900 Carya illinoinensis HOM05D004487 ORTHO05D005483 2.6e-66 256.1 241 60.6
Atru.chr3.204 Acer truncatum HOM05D004487 ORTHO05D005483 3.4e-66 255.8 233 59.2
Cc02_g15410 Coffea canephora HOM05D004487 ORTHO05D005483 9.9e-66 254.2 238 59.2
Rhsim05G0180000 Rhododendron simsii HOM05D004487 ORTHO05D005483 1.7e-65 253.4 239 56.9
CSS0025780 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 8.4e-65 251.1 241 60.6
CANSAT01G2370 Cannabis sativa HOM05D004487 ORTHO05D005483 1.4e-64 250.4 241 60.2
Gorai.007G062000 Gossypium raimondii HOM05D004487 ORTHO05D005483 1.4e-64 250.4 241 56.0
Duzib147G1438 Durio zibethinus HOM05D004487 ORTHO05D005483 1.2e-63 247.3 235 56.2
MD01G1016500 Malus domestica HOM05D004487 ORTHO05D005483 1.2e-63 247.3 241 57.7
Gohir.A11G053300 Gossypium hirsutum HOM05D004487 ORTHO05D005483 3.5e-63 245.7 241 54.8
MELO3C007790.2 Cucumis melo HOM05D004487 ORTHO05D005483 1.3e-62 243.8 234 56.0
CsaV3_5G036000 Cucumis sativus L. HOM05D004487 ORTHO05D005483 1.3e-62 243.8 242 57.0
CsaV3_6G045820 Cucumis sativus L. HOM05D004487 ORTHO05D005483 1.7e-62 243.4 234 56.4
MD15G1334800 Malus domestica HOM05D004487 ORTHO05D005483 3.0e-62 242.7 241 55.2
ClCG01G019130 Citrullus lanatus HOM05D004487 ORTHO05D005483 3.9e-62 242.3 233 54.9
Gohir.D11G056800 Gossypium hirsutum HOM05D004487 ORTHO05D005483 1.1e-61 240.7 241 54.4
Prupe.8G078400 Prunus persica HOM05D004487 ORTHO05D005483 2.8e-60 236.1 215 59.1
ECA238G1615 Erigeron canadensis HOM05D004487 ORTHO05D005483 4.7e-60 235.3 233 55.4
PGR004G1100 Punica granatum HOM05D004487 ORTHO05D005483 4.7e-60 235.3 239 53.6
HanXRQChr14g0458831 Helianthus annuus HOM05D004487 ORTHO05D005483 1.1e-59 234.2 235 54.5
Manes.12G140400 Manihot esculenta HOM05D004487 ORTHO05D005483 1.8e-59 233.4 242 56.2
RcHm_v2.0_Chr2g0115971 Rosa chinensis HOM05D004487 ORTHO05D005483 1.8e-59 233.4 230 55.2
FvH4_1g25670 Fragaria vesca HOM05D004487 ORTHO05D005483 3.1e-59 232.6 226 56.2
Nitab4.5_0007222g0010 Nicotiana tabacum HOM05D004487 ORTHO05D005483 3.1e-59 232.6 240 59.2
FvH4_1g21950 Fragaria vesca HOM05D004487 ORTHO05D005483 5.2e-59 231.9 228 53.9
TWI74G0090 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 8.9e-59 231.1 242 53.7
Lalb_Chr11g0075201 Lupinus albus HOM05D004487 ORTHO05D005483 2.6e-58 229.6 237 53.6
SGA_v2.0_scaffold106G30591 Striga asiatica HOM05D004487 ORTHO05D005483 2.6e-58 229.6 231 57.1
Lj3g0008934 Lotus japonicus HOM05D004487 ORTHO05D005483 1.3e-57 227.3 238 54.2
FAN19G1427 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.2e-57 226.5 224 53.6
FAN23G0375 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.2e-57 226.5 224 53.6
DCAR_014253 Daucus carota HOM05D004487 ORTHO05D005483 3.8e-57 225.7 227 53.3
Lsat_1_v5_gn_2_120680 Lactuca sativa HOM05D004487 ORTHO05D005483 3.8e-57 225.7 258 50.4
AUR62005250 Chenopodium quinoa HOM05D004487 ORTHO05D005483 4.9e-57 225.3 201 54.7
FAN19G3081 Fragaria x ananassa HOM05D004487 ORTHO05D005483 6.4e-57 224.9 221 55.7
arahy.Tifrunner.gnm1.ann1.0Q3DRY Arachis hypogaea HOM05D004487 ORTHO05D005483 1.9e-56 223.4 202 56.4
FAN26G2580 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.4e-56 223.0 224 53.1
unitig_22.g6757 Utricularia gibba HOM05D004487 ORTHO05D005483 3.2e-56 222.6 220 55.5
Eucgr.I00528 Eucalyptus grandis HOM05D004487 ORTHO05D005483 5.4e-56 221.9 244 51.6
FAN28G1272 Fragaria x ananassa HOM05D004487 ORTHO05D005483 7.1e-56 221.5 221 53.8
FAN28G1914 Fragaria x ananassa HOM05D004487 ORTHO05D005483 7.1e-56 221.5 221 53.8
AUR62000713 Chenopodium quinoa HOM05D004487 ORTHO05D005483 2.1e-55 219.9 201 54.2
Gohir.1Z049552 Gossypium hirsutum HOM05D004487 ORTHO05D005483 4.6e-55 218.8 179 59.2
Hma1.2p1_0486F.1_g163280 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 4.6e-55 218.8 240 53.3
Phvul.009G211400 Phaseolus vulgaris HOM05D004487 ORTHO05D005483 6.0e-55 218.4 233 53.2
arahy.Tifrunner.gnm1.ann1.NRP8RH Arachis hypogaea HOM05D004487 ORTHO05D005483 7.8e-55 218.0 220 53.2
Prupe.6G176600 Prunus persica HOM05D004487 ORTHO05D005483 1.3e-54 217.2 241 54.4
Ca_23004_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 3.0e-54 216.1 240 52.1
arahy.Tifrunner.gnm1.ann1.10QJ8K Arachis hypogaea HOM05D004487 ORTHO05D005483 3.9e-54 215.7 219 53.0
Actinidia08329 Actinidia chinensis HOM05D004487 ORTHO05D005483 6.6e-54 214.9 228 54.4
arahy.Tifrunner.gnm1.ann1.Z7G166 Arachis hypogaea HOM05D004487 ORTHO05D005483 6.6e-54 214.9 225 52.0
Glyma.15G199500 Glycine max HOM05D004487 ORTHO05D005483 6.6e-54 214.9 235 53.6
MELO3C012399.2 Cucumis melo HOM05D004487 ORTHO05D005483 8.7e-54 214.5 257 49.0
Sc16g0008840 Simmondsia chinensis HOM05D004487 ORTHO05D005483 9.6e-53 211.1 238 50.4
Lj2A942G27 Lonicera japonica HOM05D004487 ORTHO05D005483 1.3e-52 210.7 203 62.1
Potri.007G085100 Populus trichocarpa HOM05D004487 ORTHO05D005483 1.3e-52 210.7 237 53.6
TPR.G33715 Trifolium pratense HOM05D004487 ORTHO05D005483 3.6e-52 209.1 237 51.5
Aqoxy2G03854 Aquilegia oxysepala HOM05D004487 ORTHO05D005483 8.1e-52 208.0 215 58.1
ClCG05G021300 Citrullus lanatus HOM05D004487 ORTHO05D005483 2.4e-51 206.5 237 51.5
Glyma.09G092600 Glycine max HOM05D004487 ORTHO05D005483 3.1e-51 206.1 236 52.5
EL10Ac4g09863 Beta vulgaris HOM05D004487 ORTHO05D005483 5.3e-51 205.3 231 48.5
Ca_25628_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 1.5e-50 203.8 235 49.8
Sabra07G0070400 Salix brachista HOM05D004487 ORTHO05D005483 2.0e-50 203.4 237 51.9
arahy.Tifrunner.gnm1.ann1.32WU9K Arachis hypogaea HOM05D004487 ORTHO05D005483 3.4e-50 202.6 203 52.7
arahy.Tifrunner.gnm1.ann1.7417N6 Arachis hypogaea HOM05D004487 ORTHO05D005483 3.4e-50 202.6 226 49.6
arahy.Tifrunner.gnm1.ann1.S1NDRU Arachis hypogaea HOM05D004487 ORTHO05D005483 3.4e-50 202.6 226 50.0
Aa31LG6G15640 Aethionema arabicum HOM05D004487 ORTHO05D005483 9.9e-50 201.1 237 51.1
MBI04_g31212_MAGBIO Magnolia biondii HOM05D004487 ORTHO05D005483 1.7e-49 200.3 226 51.8
TAR626G1474 Trochodendron aralioides HOM05D004487 ORTHO05D005483 2.3e-46 189.9 240 52.1
Carub.0007s0150 Capsella rubella HOM05D004487 ORTHO05D005483 1.5e-45 187.2 234 47.9
Thhalv10027902m.g Eutrema salsugineum HOM05D004487 ORTHO05D005483 3.3e-45 186.0 239 47.7
arahy.Tifrunner.gnm1.ann1.Y72RXW Arachis hypogaea HOM05D004487 ORTHO05D005483 1.6e-44 183.7 226 47.8
Psat2g176760 Pisum sativum HOM05D004487 ORTHO05D005483 1.6e-44 183.7 233 47.2
AL7G11780 Arabidopsis lyrata HOM05D004487 ORTHO05D005483 2.1e-44 183.3 232 47.0
VMungo1309G0247 Vigna mungo HOM05D004487 ORTHO05D005483 2.8e-44 183.0 234 46.2
Lj2A929T16 Lonicera japonica HOM05D004487 ORTHO05D005483 1.4e-43 180.6 244 50.4
Ah.04g161200 Amaranthus hybridus HOM05D004487 ORTHO05D005483 2.4e-43 179.9 235 45.1
Dinv13358 Davidia involucrata HOM05D004487 ORTHO05D005483 4.5e-42 175.6 174 55.7
Potri.005G082500 Populus trichocarpa HOM05D004487 ORTHO05D005483 2.9e-41 172.9 235 47.2
Sp7g04740 Schrenkiella parvula HOM05D004487 ORTHO05D005483 2.9e-41 172.9 234 45.3
HanXRQChr07g0202331 Helianthus annuus HOM05D004487 ORTHO05D005483 3.8e-41 172.6 168 50.6
arahy.Tifrunner.gnm1.ann1.9RVJ5A Arachis hypogaea HOM05D004487 ORTHO05D005483 2.4e-40 169.9 202 48.5
arahy.Tifrunner.gnm1.ann1.L7ETT7 Arachis hypogaea HOM05D004487 ORTHO05D005483 3.2e-40 169.5 173 50.9
Hma1.2p1_0375F.1_g138570 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 3.2e-40 169.5 121 67.8
Dinv05687 Davidia involucrata HOM05D004487 ORTHO05D005483 7.1e-40 168.3 172 55.2
Lj4A903G12 Lonicera japonica HOM05D004487 ORTHO05D005483 1.2e-39 167.5 188 54.8
C04p44290 Brassica napus HOM05D004487 ORTHO05D005483 2.1e-39 166.8 231 45.9
Actinidia33369 Actinidia chinensis HOM05D004487 ORTHO05D005483 1.0e-38 164.5 244 45.5
THA.LOC104807718 Tarenaya hassleriana HOM05D004487 ORTHO05D005483 3.0e-38 162.9 237 43.9
BcaC02g09572 Brassica carinata HOM05D004487 ORTHO05D005483 6.7e-38 161.8 233 45.1
arahy.Tifrunner.gnm1.ann1.I45DC0 Arachis hypogaea HOM05D004487 ORTHO05D005483 4.3e-37 159.1 191 46.6
BolC4t26003H Brassica oleracea HOM05D004487 ORTHO05D005483 7.4e-37 158.3 243 43.2
TPR.G36682 Trifolium pratense HOM05D005330 ORTHO05D006489 7.4e-37 158.3 231 44.6
AT4G39630 Arabidopsis thaliana HOM05D004487 ORTHO05D005483 2.1e-36 156.8 233 42.9
CARHR215520 Cardamine hirsuta HOM05D004487 ORTHO05D005483 2.8e-36 156.4 235 42.1
A04p10610 Brassica napus HOM05D004487 ORTHO05D005483 3.7e-36 156.0 230 44.8
Os08g0290400 Oryza sativa ssp. japonica HOM05D004487 ORTHO05D005483 6.2e-36 155.2 238 40.8
BcaB06g27071 Brassica carinata HOM05D004487 ORTHO05D005483 1.8e-35 153.7 234 43.6
BraA04t16724Z Brassica rapa HOM05D004487 ORTHO05D005483 1.8e-35 153.7 229 44.1
CDE04G3174 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 1.0e-33 147.9 217 41.9
Lj6g0018564 Lotus japonicus HOM05D004487 ORTHO05D005483 6.5e-33 145.2 106 64.2
HPP92_005242 Vanilla planifolia HOM05D004487 ORTHO05D005483 6.5e-33 145.2 203 43.8
Sabra05G0067500 Salix brachista HOM05D004487 ORTHO05D005483 1.2e-31 141.0 231 43.7
SHI54251 Sapria himalayana HOM05D004487 ORTHO05D005483 1.2e-31 141.0 243 42.4
CSS0002847 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 2.7e-31 139.8 100 75.0
ATR0210G008 Amborella trichopoda HOM05D004487 ORTHO05D005483 3.5e-31 139.4 244 40.2
Zm00001eb192330 Zea mays HOM05D004487 ORTHO05D005483 2.3e-30 136.7 196 41.8
CARHR247100 Cardamine hirsuta HOM05D004487 ORTHO05D005483 1.1e-29 134.4 236 41.5
Sed0026038 Sechium edule HOM05D004487 ORTHO05D005483 7.4e-29 131.7 168 47.6
arahy.Tifrunner.gnm1.ann1.ZIF87W Arachis hypogaea HOM05D004487 ORTHO05D005483 9.7e-29 131.3 179 43.0
arahy.Tifrunner.gnm1.ann1.4M30AQ Arachis hypogaea HOM05D004487 ORTHO05D005483 3.1e-27 126.3 173 44.5
Sp7g36260 Schrenkiella parvula HOM05D004487 ORTHO05D005483 3.4e-26 122.9 230 39.6
SEGI_02201 Sequoiadendron giganteum HOM05D004487 ORTHO05D005483 3.4e-26 122.9 204 37.3
CDE04G3300 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 6.5e-25 118.6 169 40.2
TWI53G0384 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 5.1e-22 109.0 240 35.0
FAN26G0673 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.8e-20 103.2 137 46.0
CDE06G2627 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 1.3e-17 94.4 173 34.1
arahy.Tifrunner.gnm1.ann1.02EUR6 Arachis hypogaea HOM05D004487 ORTHO05D005483 3.2e-16 89.7 120 38.3
arahy.Tifrunner.gnm1.ann1.PFH739 Arachis hypogaea HOM05D004487 ORTHO05D005483 6.1e-15 85.5 98 42.9
Psat4g139880 Pisum sativum HOM05D004487 ORTHO05D005483 1.4e-14 84.3 150 36.7
Psat4g139920 Pisum sativum HOM05D004487 ORTHO05D005483 2.3e-14 83.6 150 37.3
Oeu043116.1 Olea europaea HOM05D004487 ORTHO05D005483 5.1e-14 82.4 159 34.6
arahy.Tifrunner.gnm1.ann1.PL6VNF Arachis hypogaea HOM05D004487 ORTHO05D005483 8.8e-14 81.6 93 44.1
Lalb_Chr12g0203581 Lupinus albus HOM05D004487 ORTHO05D005483 1.1e-13 81.3 227 33.5
SGA_v2.0_scaffold83G26423 Striga asiatica HOM05D004487 ORTHO05D005483 3.3e-13 79.7 91 47.3
arahy.Tifrunner.gnm1.ann1.3C43J1 Arachis hypogaea HOM05D004487 ORTHO05D005483 2.4e-11 73.6 112 41.1
CSS0022213 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 3.1e-11 73.2 50 80.0
CSS0015836 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 5.3e-11 72.4 39 94.9
arahy.Tifrunner.gnm1.ann1.RJV3W7 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.5e-10 70.9 112 40.2
arahy.Tifrunner.gnm1.ann1.E9WDF1 Arachis hypogaea HOM05D004487 ORTHO05D005483 2.0e-10 70.5 98 43.9
ATR0730G218 Amborella trichopoda HOM05D004487 ORTHO05D005483 1.9e-08 63.9 149 34.9
BcaNung00884 Brassica carinata HOM05D004487 ORTHO05D032747 1.2e-07 61.2 75 46.7
arahy.Tifrunner.gnm1.ann1.94164M Arachis hypogaea HOM05D004487 ORTHO05D005483 6.1e-07 58.9 89 40.4
arahy.Tifrunner.gnm1.ann1.FJ4QJG Arachis hypogaea HOM05D004487 ORTHO05D005483 1.0e-06 58.2 89 40.4


User provided reference genes

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