Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007441g0020 Nicotiana tabacum HOM05D004871 ORTHO05D005755 2.1e-83 312.4 163 100.0
Nitab4.5_0002468g0010 Nicotiana tabacum HOM05D004871 ORTHO05D005755 4.0e-34 148.7 80 88.8
Nitab4.5_0003318g0120 Nicotiana tabacum HOM05D004871 ORTHO05D005755 1.7e-32 143.3 78 89.7
Peaxi162Scf00129g01652 Petunia axillaris HOM05D004871 ORTHO05D005755 4.7e-27 125.2 79 78.5
Peaxi162Scf00129g00168 Petunia axillaris HOM05D004871 ORTHO05D005755 6.1e-27 124.8 79 77.2
Peaxi162Scf00129g01633 Petunia axillaris HOM05D004871 ORTHO05D005755 8.0e-27 124.4 79 77.2
PGSC0003DMG400012633 Solanum tuberosum HOM05D004871 ORTHO05D005755 1.4e-26 123.6 78 78.2
Sopen02g031150 Solanum pennellii HOM05D004871 ORTHO05D005755 1.5e-25 120.2 78 75.6
CAN.G473.11 Capsicum annuum HOM05D004871 ORTHO05D005755 2.0e-25 119.8 78 75.6
Hma1.2p1_2120F.1_g314420 Hydrangea macrophylla HOM05D004871 ORTHO05D005755 1.3e-24 117.1 99 60.6
Gorai.001G265000 Gossypium raimondii HOM05D004871 ORTHO05D005755 2.8e-24 115.9 80 70.0
Gohir.A07G223200 Gossypium hirsutum HOM05D004871 ORTHO05D005755 8.3e-24 114.4 80 70.0
Gohir.D07G229900 Gossypium hirsutum HOM05D004871 ORTHO05D005755 8.3e-24 114.4 80 68.8
Lju41C42T3 Lonicera japonica HOM05D004871 ORTHO05D005755 3.2e-23 112.5 78 70.5
Prupe.3G291600 Prunus persica HOM05D004871 ORTHO05D005755 9.2e-23 110.9 80 67.5
QL02p074723 Quercus lobata HOM05D004871 ORTHO05D005755 9.2e-23 110.9 79 69.6
CiPaw.03G043700 Carya illinoinensis HOM05D004871 ORTHO05D005755 1.2e-22 110.5 79 68.4
Thecc.04G017200 Theobroma cacao HOM05D004871 ORTHO05D005755 1.2e-22 110.5 99 57.6
Lj1g0007322 Lotus japonicus HOM05D004871 ORTHO05D005755 1.6e-22 110.2 80 67.5
MD17G1027100 Malus domestica HOM05D004871 ORTHO05D005755 2.0e-22 109.8 80 65.0
Duzib147G1217 Durio zibethinus HOM05D004871 ORTHO05D005755 3.5e-22 109.0 79 67.1
GSVIVG01032408001 Vitis vinifera HOM05D004871 ORTHO05D005755 3.5e-22 109.0 79 68.4
COL.COLO4_29115 Corchorus olitorius HOM05D004871 ORTHO05D005755 4.5e-22 108.6 80 68.8
RcHm_v2.0_Chr2g0172801 Rosa chinensis HOM05D004871 ORTHO05D005755 5.9e-22 108.2 80 65.0
MSTRG.24039 Avicennia marina HOM05D004871 ORTHO05D005755 1.3e-21 107.1 77 67.5
FvH4_6g51200 Fragaria vesca HOM05D004871 ORTHO05D005755 1.7e-21 106.7 80 66.2
FAN14G1702 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.7e-21 106.7 80 66.2
Eucgr.J02242 Eucalyptus grandis HOM05D004871 ORTHO05D005755 2.3e-21 106.3 80 63.8
FAN05G1656 Fragaria x ananassa HOM05D004871 ORTHO05D005755 2.3e-21 106.3 80 65.0
FAN09G0732 Fragaria x ananassa HOM05D000795 ORTHO05D005755 2.3e-21 106.3 80 65.0
Oeu054623.1 Olea europaea HOM05D004871 ORTHO05D005755 2.3e-21 106.3 78 69.2
MD09G1027100 Malus domestica HOM05D004871 ORTHO05D005755 2.9e-21 105.9 80 61.2
FAN02G2556 Fragaria x ananassa HOM05D004871 ORTHO05D005755 3.9e-21 105.5 80 65.0
Eucgr.H01852 Eucalyptus grandis HOM05D004871 ORTHO05D005755 6.6e-21 104.8 80 62.5
Oeu018139.1 Olea europaea HOM05D004871 ORTHO05D005755 6.6e-21 104.8 77 67.5
Atru.chr6.2393 Acer truncatum HOM05D004871 ORTHO05D005755 8.6e-21 104.4 80 65.0
Nn3g16731 Nelumbo nucifera HOM05D004871 ORTHO05D005755 8.6e-21 104.4 79 64.6
Nn3g16736 Nelumbo nucifera HOM05D004871 ORTHO05D005755 8.6e-21 104.4 79 64.6
CsaV3_3G042800 Cucumis sativus L. HOM05D004871 ORTHO05D005755 1.1e-20 104.0 79 67.1
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 1.5e-20 103.6 79 65.8
ClCG10G013890 Citrullus lanatus HOM05D004871 ORTHO05D005755 1.9e-20 103.2 79 64.6
Haze_14739 Corylus avellana HOM05D004871 ORTHO05D005755 3.3e-20 102.4 79 65.8
MELO3C026581.2 Cucumis melo HOM05D004871 ORTHO05D005755 3.3e-20 102.4 79 64.6
DCAR_021722 Daucus carota HOM05D004871 ORTHO05D005755 3.3e-20 102.4 79 64.6
Gohir.D04G057500 Gossypium hirsutum HOM05D004871 ORTHO05D005755 3.3e-20 102.4 79 64.6
Gorai.012G064200 Gossypium raimondii HOM05D004871 ORTHO05D005755 3.3e-20 102.4 79 64.6
CSS0032397 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 4.3e-20 102.1 80 62.5
Sed0007166 Sechium edule HOM05D004871 ORTHO05D005755 4.3e-20 102.1 78 65.4
Ciclev10015079m.g Citrus clementina HOM05D004871 ORTHO05D005755 5.6e-20 101.7 86 62.8
Cfa007369 Carpinus fangiana HOM05D004871 ORTHO05D005755 7.3e-20 101.3 79 65.8
CiPaw.04G028400 Carya illinoinensis HOM05D004871 ORTHO05D005755 9.5e-20 100.9 79 64.6
Lalb_Chr24g0402861 Lupinus albus HOM05D004871 ORTHO05D005755 9.5e-20 100.9 80 63.8
Gohir.A05G355800 Gossypium hirsutum HOM05D004871 ORTHO05D005755 1.6e-19 100.1 79 63.3
THA.LOC104825322 Tarenaya hassleriana HOM05D004871 ORTHO05D005755 1.6e-19 100.1 78 61.5
Lj7C599T13 Lonicera japonica HOM05D004871 ORTHO05D005755 3.6e-19 99.0 98 52.0
SalBow1G4779 Salvia bowleyana HOM05D004871 ORTHO05D005755 4.7e-19 98.6 77 63.6
Lalb_Chr14g0362771 Lupinus albus HOM05D004871 ORTHO05D005755 8.0e-19 97.8 80 62.5
Potri.017G069800 Populus trichocarpa HOM05D004871 ORTHO05D005755 8.0e-19 97.8 79 60.8
Cc07_g01680 Coffea canephora HOM05D004871 ORTHO05D005755 2.3e-18 96.3 98 53.1
vmacro18283 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 3.1e-18 95.9 79 59.5
Glyma.19G068600 Glycine max HOM05D004871 ORTHO05D005755 4.0e-18 95.5 77 57.1
Nn1g05920 Nelumbo nucifera HOM05D004871 ORTHO05D005755 4.0e-18 95.5 79 60.8
Sabra17G0062100 Salix brachista HOM05D004871 ORTHO05D005755 4.0e-18 95.5 79 58.2
Cc00_g26710 Coffea canephora HOM05D004871 ORTHO05D005755 5.2e-18 95.1 79 62.0
Rhsim08G0049200 Rhododendron simsii HOM05D004871 ORTHO05D005755 5.2e-18 95.1 76 59.2
Rhsim08G0050100 Rhododendron simsii HOM05D004871 ORTHO05D005755 5.2e-18 95.1 79 57.0
TAR374G1232 Trochodendron aralioides HOM05D004871 ORTHO05D005755 6.8e-18 94.7 80 57.5
Lsat_1_v5_gn_0_47681 Lactuca sativa HOM05D004871 ORTHO05D005755 8.9e-18 94.4 71 67.6
vmacro23390 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 8.9e-18 94.4 79 58.2
BcaB06g27513 Brassica carinata HOM05D004871 ORTHO05D005755 1.2e-17 94.0 79 54.4
A04p13500 Brassica napus HOM05D004871 ORTHO05D005755 1.2e-17 94.0 79 53.2
Migut.H00077 Erythranthe guttata HOM05D004871 ORTHO05D005755 1.2e-17 94.0 73 60.3
Psat3g166880 Pisum sativum HOM05D004871 ORTHO05D005755 1.2e-17 94.0 87 54.0
BraA04t17009Z Brassica rapa HOM05D004871 ORTHO05D005755 1.5e-17 93.6 79 53.2
Medtr7g033720 Medicago truncatula HOM05D004871 ORTHO05D005755 1.5e-17 93.6 75 58.7
Thhalv10028043m.g Eutrema salsugineum HOM05D004871 ORTHO05D005755 2.6e-17 92.8 79 53.2
PGR083G0754 Punica granatum HOM05D004871 ORTHO05D005755 2.6e-17 92.8 78 59.0
C04p47280 Brassica napus HOM05D004871 ORTHO05D005755 3.4e-17 92.4 79 53.2
BolC4t26328H Brassica oleracea HOM05D004871 ORTHO05D005755 3.4e-17 92.4 79 53.2
CARHR261520 Cardamine hirsuta HOM05D004871 ORTHO05D005755 3.4e-17 92.4 79 51.9
Actinidia35771 Actinidia chinensis HOM05D004871 ORTHO05D005755 4.4e-17 92.0 68 66.2
Atru.chr6.2392 Acer truncatum HOM05D004871 ORTHO05D005755 5.8e-17 91.7 80 57.5
AT5G40470 Arabidopsis thaliana HOM05D004871 ORTHO05D005755 5.8e-17 91.7 78 53.8
TWI12G0316 Tripterygium wilfordii HOM05D004871 ORTHO05D005755 5.8e-17 91.7 79 62.0
TAR629G3424 Trochodendron aralioides HOM05D004871 ORTHO05D005755 9.8e-17 90.9 75 54.7
Sp7g01440 Schrenkiella parvula HOM05D004871 ORTHO05D005755 1.3e-16 90.5 79 51.9
Ca_23007_v3 Cicer arietinum L. HOM05D004871 ORTHO05D005755 1.7e-16 90.1 79 51.9
SalBow2G2412 Salvia bowleyana HOM05D004871 ORTHO05D005755 1.7e-16 90.1 77 61.0
Rhsim08G0049900 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.2e-16 89.7 81 56.8
unitig_899.g14805 Utricularia gibba HOM05D004871 ORTHO05D005755 2.9e-16 89.4 126 43.7
SGA_v2.0_scaffold18G08277 Striga asiatica HOM05D004871 ORTHO05D005755 3.7e-16 89.0 76 64.5
Sc16g0004350 Simmondsia chinensis HOM05D004871 ORTHO05D005755 4.9e-16 88.6 87 55.2
Eucgr.L00043 Eucalyptus grandis HOM05D004871 ORTHO05D005755 6.4e-16 88.2 80 55.0
HanXRQChr17g0548491 Helianthus annuus HOM05D004871 ORTHO05D005755 1.1e-15 87.4 72 63.9
Carub.0007s3511 Capsella rubella HOM05D004871 ORTHO05D005755 3.2e-15 85.9 80 48.8
CDE08G0710 Ceratophyllum demersum HOM05D004871 ORTHO05D005755 5.4e-15 85.1 79 55.7
Phvul.008G154600 Phaseolus vulgaris HOM05D004871 ORTHO05D005755 5.4e-15 85.1 77 53.2
Glyma.16G071200 Glycine max HOM05D004871 ORTHO05D005755 7.0e-15 84.7 71 57.7
VMungo1383G0924 Vigna mungo HOM05D004871 ORTHO05D005755 1.2e-14 84.0 77 51.9
Manes.15G150700 Manihot esculenta HOM05D004871 ORTHO05D005755 1.6e-14 83.6 65 63.1
Cpa.g.sc130.82 Carica papaya HOM05D004871 ORTHO05D005755 2.0e-14 83.2 83 53.0
Aa31LG9G1150 Aethionema arabicum HOM05D004871 ORTHO05D005755 3.5e-14 82.4 76 52.6
Rhsim08G0049300 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.3e-13 80.5 79 50.6
vmacro18284 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 1.3e-13 80.5 80 51.2
vmacro23391 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 1.3e-13 80.5 80 51.2
CANSAT64G1143 Cannabis sativa HOM05D004871 ORTHO05D005755 2.3e-13 79.7 79 54.4
Rhsim08G0050600 Rhododendron simsii HOM05D004871 ORTHO05D005755 3.0e-13 79.3 99 43.4
ATR0686G244 Amborella trichopoda HOM05D004871 ORTHO05D005755 5.0e-13 78.6 79 53.2
TAR371G0343 Trochodendron aralioides HOM05D004871 ORTHO05D005755 5.0e-13 78.6 78 52.6
TAR633G0371 Trochodendron aralioides HOM05D004871 ORTHO05D005755 6.6e-13 78.2 78 53.8
PSO063G1038 Papaver somniferum HOM05D004871 ORTHO05D005755 2.5e-12 76.3 70 51.4
HPP92_009906 Vanilla planifolia HOM05D004871 ORTHO05D005755 2.5e-12 76.3 80 53.8
TAR622G0125 Trochodendron aralioides HOM05D004871 ORTHO05D005755 3.3e-12 75.9 64 59.4
PSO832G2649 Papaver somniferum HOM05D004871 ORTHO05D005755 4.3e-12 75.5 70 50.0
Rhsim08G0048900 Rhododendron simsii HOM05D004871 ORTHO05D005755 4.3e-12 75.5 81 53.1
TAR371G0422 Trochodendron aralioides HOM05D004871 ORTHO05D005755 4.3e-12 75.5 78 52.6
Zm00001eb246170 Zea mays HOM05D004871 ORTHO05D005755 5.6e-12 75.1 72 54.2
AL7G49360 Arabidopsis lyrata HOM05D004871 ORTHO05D005755 7.3e-12 74.7 68 50.0
Rhsim08G0050200 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.6e-11 73.6 154 35.7
TAR371G0152 Trochodendron aralioides HOM05D004871 ORTHO05D005755 2.1e-11 73.2 78 51.3
ATR0589G064 Amborella trichopoda HOM05D004871 ORTHO05D005755 2.8e-11 72.8 79 53.2
Rhsim08G0049400 Rhododendron simsii HOM05D004871 ORTHO05D005755 4.7e-11 72.0 81 48.1
Aqoxy5G03783 Aquilegia oxysepala HOM05D004871 ORTHO05D005755 1.1e-10 70.9 98 41.8
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 6.8e-10 68.2 81 44.4
Rhsim08G0049600 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.5e-09 67.0 80 45.0
Rhsim08G0050300 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.6e-09 66.2 79 46.8
HanXRQChr15g0475301 Helianthus annuus HOM05D004871 ORTHO05D005755 4.4e-09 65.5 70 45.7
vmacro18285 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 7.5e-09 64.7 73 49.3
vmacro23392 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 7.5e-09 64.7 73 49.3
TAR371G1027 Trochodendron aralioides HOM05D004871 ORTHO05D005755 9.8e-09 64.3 81 45.7
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.2e-08 63.2 62 51.6
Dinv35106 Davidia involucrata HOM05D004871 ORTHO05D005755 3.7e-08 62.4 55 61.8


User provided reference genes

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