Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007400g0130 Nicotiana tabacum HOM05D001750 ORTHO05D001825 2.7e-42 174.9 86 100.0
EL10As15g24136 Beta vulgaris HOM05D001750 ORTHO05D001825 5.0e-28 127.5 77 83.1
BolC9t56810H Brassica oleracea HOM05D001750 ORTHO05D001825 1.9e-27 125.6 77 83.1
BolSC49t61137H Brassica oleracea HOM05D001750 ORTHO05D001825 1.9e-27 125.6 77 83.1
Solyc11g044645.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 5.5e-27 124.0 77 83.1
CAN.G134.7 Capsicum annuum HOM05D001750 ORTHO05D001825 7.2e-27 123.6 101 68.3
CAN.G1431.3 Capsicum annuum HOM05D001750 ORTHO05D001825 7.2e-27 123.6 101 68.3
CAN.G1526.5 Capsicum annuum HOM05D001750 ORTHO05D001825 7.2e-27 123.6 101 68.3
CAN.G413.7 Capsicum annuum HOM05D001750 ORTHO05D001825 7.2e-27 123.6 101 68.3
Solyc00g500195.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 7.2e-27 123.6 101 68.3
PGSC0003DMG400029008 Solanum tuberosum HOM05D001750 ORTHO05D001825 7.2e-27 123.6 101 68.3
HanXRQChr00c0289g0573101 Helianthus annuus HOM05D001750 ORTHO05D001825 1.6e-26 122.5 77 79.2
Lalb_Chr16g0388571 Lupinus albus HOM05D001750 ORTHO05D001825 2.1e-26 122.1 77 79.2
CAN.G1045.16 Capsicum annuum HOM05D001750 ORTHO05D001825 3.6e-26 121.3 101 67.3
Nn064s42216 Nelumbo nucifera HOM05D001750 ORTHO05D001825 1.2e-24 116.3 101 65.3
Nn212s45208 Nelumbo nucifera HOM05D001750 ORTHO05D001825 1.2e-24 116.3 101 65.3
Lj2P1238T72 Lonicera japonica HOM05D001750 ORTHO05D001825 1.5e-24 115.9 101 64.4
FvH4_c3g00021 Fragaria vesca HOM05D001750 ORTHO05D001825 2.0e-24 115.5 101 65.3
Solyc02g011710.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 2.6e-24 115.2 70 81.4
AL7G50360 Arabidopsis lyrata HOM05D001750 ORTHO05D001825 4.4e-24 114.4 101 64.4
EL10As28g24255 Beta vulgaris HOM05D001750 ORTHO05D001825 5.7e-24 114.0 101 63.4
Potri.001G342933 Populus trichocarpa HOM05D001750 ORTHO05D001825 5.7e-24 114.0 70 82.9
PGR111G0046 Punica granatum HOM05D001750 ORTHO05D001825 5.7e-24 114.0 101 63.4
ATCG01010 Arabidopsis thaliana HOM05D001750 ORTHO05D001825 1.7e-23 112.5 101 63.4
EL10Ac1g00371 Beta vulgaris HOM05D001750 ORTHO05D001825 1.7e-23 112.5 70 80.0
HanXRQChr02g0059681 Helianthus annuus HOM05D001750 ORTHO05D001825 1.7e-23 112.5 101 62.4
HanXRQChr05g0152401 Helianthus annuus HOM05D001750 ORTHO05D001825 1.7e-23 112.5 101 62.4
HanXRQCPg0580391 Helianthus annuus HOM05D001750 ORTHO05D001825 1.7e-23 112.5 101 62.4
BolSC37t60789H Brassica oleracea HOM05D001750 ORTHO05D001825 2.2e-23 112.1 101 63.4
BolSC44t60818H Brassica oleracea HOM05D001750 ORTHO05D001825 2.2e-23 112.1 101 63.4
BolSC45t60914H Brassica oleracea HOM05D001750 ORTHO05D001825 2.2e-23 112.1 101 63.4
BraSC103t45424Z Brassica rapa HOM05D001750 ORTHO05D001825 2.2e-23 112.1 101 63.4
BraSC143t45665Z Brassica rapa HOM05D001750 ORTHO05D001825 2.2e-23 112.1 101 63.4
BraSC25t45905Z Brassica rapa HOM05D001750 ORTHO05D001825 2.2e-23 112.1 101 63.4
BraSC59t46546Z Brassica rapa HOM05D001750 ORTHO05D001825 2.2e-23 112.1 101 63.4
DCAR_032533 Daucus carota HOM05D001750 ORTHO05D001825 2.8e-23 111.7 101 61.4
Ciclev10013979m.g Citrus clementina HOM05D001750 ORTHO05D001825 3.7e-23 111.3 101 62.4
Ciclev10013982m.g Citrus clementina HOM05D001750 ORTHO05D001825 3.7e-23 111.3 101 62.4
Ciclev10013988m.g Citrus clementina HOM05D001750 ORTHO05D001825 3.7e-23 111.3 101 62.4
Ciclev10013998m.g Citrus clementina HOM05D001750 ORTHO05D001825 3.7e-23 111.3 101 62.4
Ciclev10014001m.g Citrus clementina HOM05D001750 ORTHO05D001825 3.7e-23 111.3 101 62.4
Ciclev10018421m.g Citrus clementina HOM05D001750 ORTHO05D001825 3.7e-23 111.3 101 62.4
Ciclev10030453m.g Citrus clementina HOM05D001750 ORTHO05D001825 3.7e-23 111.3 101 62.4
Gohir.A04G039195 Gossypium hirsutum HOM05D001750 ORTHO05D001825 3.7e-23 111.3 101 61.4
Gohir.A12G229700 Gossypium hirsutum HOM05D001750 ORTHO05D001825 3.7e-23 111.3 101 61.4
LjContig00318g0010147 Lotus japonicus HOM05D001750 ORTHO05D001825 3.7e-23 111.3 101 62.4
LjContig00319g0009462 Lotus japonicus HOM05D001750 ORTHO05D001825 3.7e-23 111.3 101 62.4
Gohir.1Z049402 Gossypium hirsutum HOM05D001750 ORTHO05D001825 6.3e-23 110.5 101 60.4
Lalb_Chr03g0039401 Lupinus albus HOM05D001750 ORTHO05D001825 6.3e-23 110.5 101 61.4
SEGI_32159 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 6.3e-23 110.5 101 60.4
SEGI_35420 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 6.3e-23 110.5 101 60.4
unitig_736.g22737 Utricularia gibba HOM05D001750 ORTHO05D001825 6.3e-23 110.5 100 60.0
Medtr4g051300 Medicago truncatula HOM05D001750 ORTHO05D001825 1.1e-22 109.8 101 61.4
Medtr7g021740 Medicago truncatula HOM05D001750 ORTHO05D001825 1.1e-22 109.8 101 61.4
Gohir.A02G134105 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.4e-22 109.4 101 60.4
HanXRQChr06g0182971 Helianthus annuus HOM05D001750 ORTHO05D001825 1.4e-22 109.4 101 61.4
SEGI_32489 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 1.8e-22 109.0 100 60.0
arahy.Tifrunner.gnm1.ann1.5P7K6N Arachis hypogaea HOM05D001750 ORTHO05D001825 2.4e-22 108.6 101 61.4
arahy.Tifrunner.gnm1.ann1.B6WU7N Arachis hypogaea HOM05D001750 ORTHO05D001825 2.4e-22 108.6 101 61.4
HanXRQChr17g0557801 Helianthus annuus HOM05D001750 ORTHO05D001825 2.4e-22 108.6 101 60.4
Medtr0002s0200 Medicago truncatula HOM05D001750 ORTHO05D001825 2.4e-22 108.6 101 59.4
PSO548G0117 Papaver somniferum HOM05D001750 ORTHO05D001825 2.4e-22 108.6 101 59.4
Sed0000095 Sechium edule HOM05D001750 ORTHO05D001825 2.4e-22 108.6 101 61.4
Gohir.A07G167090 Gossypium hirsutum HOM05D001750 ORTHO05D001825 3.1e-22 108.2 101 60.4
HanXRQChr08g0212841 Helianthus annuus HOM05D001750 ORTHO05D001825 3.1e-22 108.2 101 60.4
Nn031s41610 Nelumbo nucifera HOM05D001750 ORTHO05D001825 3.1e-22 108.2 101 62.4
Psat0ss8367g0120 Pisum sativum HOM05D001750 ORTHO05D001825 3.1e-22 108.2 101 60.4
Gohir.1Z049581 Gossypium hirsutum HOM05D001750 ORTHO05D001825 9.1e-22 106.7 101 59.4
Gohir.D09G044501 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.6e-21 105.9 101 60.4
Gorai.010G151000 Gossypium raimondii HOM05D001750 ORTHO05D001825 2.2e-20 102.1 71 73.2
Gorai.006G066100 Gossypium raimondii HOM05D001750 ORTHO05D001825 8.5e-20 100.1 101 59.4
Psat5g142840 Pisum sativum HOM05D001750 ORTHO05D001825 1.9e-19 99.0 101 57.4
BolSC43t60806H Brassica oleracea HOM05D001750 ORTHO05D001825 3.2e-19 98.2 70 75.7
SabraPtG0005600 Salix brachista HOM05D000533 ORTHO05D006151 2.1e-18 95.5 60 83.3
Glyma.11G081100 Glycine max HOM05D001750 ORTHO05D001825 1.0e-17 93.2 100 55.0
Lsat_1_v5_gn_5_52761 Lactuca sativa HOM05D001750 ORTHO05D001825 2.6e-16 88.6 104 50.0
SEGI_16404 Sequoiadendron giganteum HOM05D001387 ORTHO05D001250 1.3e-15 86.3 89 56.2
HanXRQChr01g0020101 Helianthus annuus HOM05D001750 ORTHO05D001825 1.8e-14 82.4 101 51.5
HanXRQChr09g0258551 Helianthus annuus HOM05D001750 ORTHO05D001825 1.8e-14 82.4 101 51.5
PGSC0003DMG400010958 Solanum tuberosum HOM05D001750 ORTHO05D001825 4.1e-14 81.3 44 88.6
GSVIVG01004971001 Vitis vinifera HOM05D001750 ORTHO05D001825 9.1e-14 80.1 72 61.1
Oeu016296.1 Olea europaea HOM05D001750 ORTHO05D001825 1.6e-13 79.3 82 56.1
SMO086G0048 Selaginella moellendorffii HOM05D001750 ORTHO05D001825 2.7e-13 78.6 65 60.0
Solyc05g013100.2 Solanum lycopersicum HOM05D001750 ORTHO05D001825 7.7e-13 77.0 78 59.0
Mapoly0092s0002 Marchantia polymorpha HOM05D001750 ORTHO05D001825 2.9e-12 75.1 73 54.8
Manes.18G138200 Manihot esculenta HOM05D001750 ORTHO05D001825 6.6e-12 73.9 47 72.3
BolSC46t60963H Brassica oleracea HOM05D001750 ORTHO05D001825 3.3e-11 71.6 88 52.3
Oeu012766.1 Olea europaea HOM05D001750 ORTHO05D001825 3.3e-11 71.6 75 54.7
Nn1g09725 Nelumbo nucifera HOM05D001750 ORTHO05D001825 9.5e-11 70.1 72 58.3
Oeu058353.1 Olea europaea HOM05D001750 ORTHO05D001825 9.5e-11 70.1 73 52.1
Psat0s6638g0080 Pisum sativum HOM05D001750 ORTHO05D001825 1.2e-10 69.7 78 53.8
Psat0s8829g0080 Pisum sativum HOM05D001750 ORTHO05D001825 1.2e-10 69.7 78 53.8
Psat4g065280 Pisum sativum HOM05D001750 ORTHO05D001825 1.2e-10 69.7 78 53.8
SalBow1G5472 Salvia bowleyana HOM05D001750 ORTHO05D001825 1.6e-10 69.3 75 54.7
SEGI_05928 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 6.1e-10 67.4 71 54.9
EL10As4g23402 Beta vulgaris HOM05D001750 ORTHO05D001825 1.4e-09 66.2 39 87.2
Oeu058634.1 Olea europaea HOM05D001750 ORTHO05D001825 1.4e-09 66.2 76 52.6
Solyc01g017100.2 Solanum lycopersicum HOM05D001750 ORTHO05D001825 8.9e-09 63.5 70 54.3
Solyc11g021190.2 Solanum lycopersicum HOM05D001750 ORTHO05D001825 1.7e-07 59.3 33 87.9
Solyc12g033070.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 1.7e-07 59.3 39 74.4
Migut.D01382 Erythranthe guttata HOM05D001750 ORTHO05D001825 2.8e-07 58.5 80 47.5
Lalb_Chr15g0080751 Lupinus albus HOM05D001750 ORTHO05D001825 3.7e-07 58.2 54 59.3
TPR.G33669 Trifolium pratense HOM05D001750 ORTHO05D001825 3.7e-07 58.2 36 80.6
CARHR212490 Cardamine hirsuta HOM05D001750 ORTHO05D001825 4.9e-07 57.8 55 60.0
unitig_91.g26524 Utricularia gibba HOM05D001750 ORTHO05D001825 6.3e-07 57.4 63 52.4
BraSC138t45539Z Brassica rapa HOM05D001750 ORTHO05D001825 1.4e-06 56.2 66 54.5


User provided reference genes

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