Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007388g0100 Nicotiana tabacum HOM05D000101 ORTHO05D000089 9.1e-113 410.2 204 100.0
Nitab4.5_0000593g0270 Nicotiana tabacum HOM05D000101 ORTHO05D000089 1.1e-73 280.4 240 62.9
Nitab4.5_0014215g0030 Nicotiana tabacum HOM05D000101 ORTHO05D000089 6.4e-66 254.6 167 78.4
PGSC0003DMG400027325 Solanum tuberosum HOM05D000101 ORTHO05D000089 1.2e-64 250.4 242 55.8
Solyc11g007790.1 Solanum lycopersicum HOM05D000101 ORTHO05D000089 1.6e-64 250.0 242 54.5
Peaxi162Scf00321g00011 Petunia axillaris HOM05D000101 ORTHO05D000089 1.4e-60 236.9 243 53.1
Nitab4.5_0027955g0010 Nicotiana tabacum HOM05D000101 ORTHO05D000089 6.0e-56 221.5 227 55.1
Sopen11g003650 Solanum pennellii HOM05D000101 ORTHO05D000089 1.2e-51 207.2 142 70.4
Nitab4.5_0007388g0030 Nicotiana tabacum HOM05D000101 ORTHO05D000089 7.2e-33 144.8 118 67.8
Gohir.A08G233500 Gossypium hirsutum HOM05D000101 ORTHO05D000089 6.1e-16 88.6 229 30.1
Thecc.07G078500 Theobroma cacao HOM05D000101 ORTHO05D000089 1.2e-14 84.3 208 36.1
Gohir.D08G253700 Gossypium hirsutum HOM05D000101 ORTHO05D000089 3.3e-14 82.8 191 32.5
Cc01_g06910 Coffea canephora HOM05D000101 ORTHO05D000089 4.4e-14 82.4 275 26.9
Cc07_g20620 Coffea canephora HOM05D000101 ORTHO05D000089 5.7e-14 82.0 275 26.5
Gorai.004G270600 Gossypium raimondii HOM05D000101 ORTHO05D000089 9.7e-14 81.3 191 31.9
Oeu062624.1 Olea europaea HOM05D000101 ORTHO05D000089 1.7e-13 80.5 195 31.3
TWI39G0378 Tripterygium wilfordii HOM05D000101 ORTHO05D000089 1.7e-13 80.5 272 25.7
Oeu059288.1 Olea europaea HOM05D000101 ORTHO05D000089 6.3e-13 78.6 275 29.5
Oeu042916.1 Olea europaea HOM05D000101 ORTHO05D000089 2.4e-12 76.6 271 26.9
Cc01_g03020 Coffea canephora HOM05D000101 ORTHO05D000089 5.3e-12 75.5 209 31.1
QL09p032708 Quercus lobata HOM05D000101 ORTHO05D000089 7.0e-12 75.1 156 34.6
Actinidia05166 Actinidia chinensis HOM05D000101 ORTHO05D000089 9.1e-12 74.7 212 30.2
Gohir.A04G030608 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.2e-11 74.3 202 27.7
SalBow7G0315 Salvia bowleyana HOM05D000101 ORTHO05D000089 1.6e-11 73.9 149 33.6
Gohir.A11G285400 Gossypium hirsutum HOM05D000101 ORTHO05D000089 2.0e-11 73.6 204 31.4
Thecc.07G078900 Theobroma cacao HOM05D000101 ORTHO05D000089 4.5e-11 72.4 207 32.9
Duzib268G0201 Durio zibethinus HOM05D000101 ORTHO05D000089 5.9e-11 72.0 199 28.1
Gohir.A10G204000 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.9e-11 72.0 239 28.9
QL12p023623 Quercus lobata HOM05D000101 ORTHO05D000089 7.7e-11 71.6 230 30.4
Gohir.A04G033300 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.0e-10 71.2 178 32.0
Ciclev10024821m.g Citrus clementina HOM05D000101 ORTHO05D000089 1.3e-10 70.9 209 27.3
Gohir.D10G067820 Gossypium hirsutum HOM05D000101 ORTHO05D000089 2.2e-10 70.1 206 29.1
Gorai.011G237700 Gossypium raimondii HOM05D000101 ORTHO05D000089 2.2e-10 70.1 240 25.8
QL02p080444 Quercus lobata HOM05D000101 ORTHO05D000089 2.2e-10 70.1 251 27.1
Thecc.07G078100 Theobroma cacao HOM05D000101 ORTHO05D000089 2.2e-10 70.1 210 31.4
Dinv07273 Davidia involucrata HOM05D000101 ORTHO05D000089 2.9e-10 69.7 125 37.6
QL12p023642 Quercus lobata HOM05D000101 ORTHO05D000089 2.9e-10 69.7 236 28.4
COL.COLO4_17455 Corchorus olitorius HOM05D000101 ORTHO05D000089 3.8e-10 69.3 220 28.6
Ciclev10024814m.g Citrus clementina HOM05D000101 ORTHO05D000089 5.0e-10 68.9 217 26.7
Thecc.07G091000 Theobroma cacao HOM05D000101 ORTHO05D000089 5.0e-10 68.9 201 28.4
Ciclev10024817m.g Citrus clementina HOM05D000101 ORTHO05D000089 6.5e-10 68.6 219 28.3
Gohir.D10G211800 Gossypium hirsutum HOM05D000101 ORTHO05D000089 6.5e-10 68.6 204 31.4
Oeu042917.1 Olea europaea HOM05D000101 ORTHO05D000089 6.5e-10 68.6 178 32.6
QL12p023591 Quercus lobata HOM05D000101 ORTHO05D000089 6.5e-10 68.6 236 29.2
Dinv02505 Davidia involucrata HOM05D000101 ORTHO05D000089 8.5e-10 68.2 145 30.3
Dinv19550 Davidia involucrata HOM05D000101 ORTHO05D000089 8.5e-10 68.2 145 30.3
Dinv24581 Davidia involucrata HOM05D000101 ORTHO05D000089 1.1e-09 67.8 153 32.7
CAN.G1661.3 Capsicum annuum HOM05D000101 ORTHO05D000089 1.5e-09 67.4 152 31.6
Duzib268G0383 Durio zibethinus HOM05D000101 ORTHO05D000089 1.5e-09 67.4 94 38.3
Duzib268G1464 Durio zibethinus HOM05D000101 ORTHO05D000089 1.5e-09 67.4 200 27.0
QL12p023483 Quercus lobata HOM05D000101 ORTHO05D000089 1.5e-09 67.4 251 27.1
Dinv07876 Davidia involucrata HOM05D000101 ORTHO05D000089 1.9e-09 67.0 155 33.5
Dinv29323 Davidia involucrata HOM05D000101 ORTHO05D000089 1.9e-09 67.0 203 29.1
Gohir.D05G354200 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.9e-09 67.0 184 26.1
QL08p001456 Quercus lobata HOM05D000101 ORTHO05D000089 1.9e-09 67.0 237 28.7
Duzib268G0689 Durio zibethinus HOM05D000101 ORTHO05D000089 2.5e-09 66.6 199 27.6
QL08p018471 Quercus lobata HOM05D000101 ORTHO05D000089 2.5e-09 66.6 260 26.2
QL08p018201 Quercus lobata HOM05D000101 ORTHO05D000089 3.2e-09 66.2 198 31.8
Ciclev10027601m.g Citrus clementina HOM05D000101 ORTHO05D000089 4.2e-09 65.9 211 26.1
Cc07_g18670 Coffea canephora HOM05D000101 ORTHO05D000089 4.2e-09 65.9 202 28.2
Gohir.A04G036100 Gossypium hirsutum HOM05D000101 ORTHO05D000089 4.2e-09 65.9 151 30.5
CAN.G639.26 Capsicum annuum HOM05D000101 ORTHO05D000089 5.5e-09 65.5 158 29.1
Gohir.D05G349700 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.5e-09 65.5 235 27.7
Gorai.007G323300 Gossypium raimondii HOM05D000101 ORTHO05D000089 5.5e-09 65.5 225 26.7
Oeu052121.2 Olea europaea HOM05D000101 ORTHO05D000089 5.5e-09 65.5 190 31.1
Potri.019G014360 Populus trichocarpa HOM05D000101 ORTHO05D000089 5.5e-09 65.5 242 28.1
Gorai.009G379600 Gossypium raimondii HOM05D000101 ORTHO05D000089 7.2e-09 65.1 235 27.7
QL12p023527 Quercus lobata HOM05D000101 ORTHO05D000089 7.2e-09 65.1 196 28.6
Thecc.07G090800 Theobroma cacao HOM05D000101 ORTHO05D000089 7.2e-09 65.1 197 28.9
Duzib213G0124 Durio zibethinus HOM05D000101 ORTHO05D000089 9.4e-09 64.7 210 31.4
Gohir.D01G058200 Gossypium hirsutum HOM05D000101 ORTHO05D000089 9.4e-09 64.7 201 29.9
Thecc.07G078300 Theobroma cacao HOM05D000101 ORTHO05D000089 9.4e-09 64.7 191 29.3
CAN.G1661.6 Capsicum annuum HOM05D000101 ORTHO05D000089 1.2e-08 64.3 172 29.7
Ciclev10024820m.g Citrus clementina HOM05D000101 ORTHO05D000089 1.2e-08 64.3 188 25.5
Dinv01249 Davidia involucrata HOM05D000101 ORTHO05D000089 1.2e-08 64.3 135 34.1
Duzib187G0797 Durio zibethinus HOM05D000101 ORTHO05D000089 1.2e-08 64.3 202 27.2
Gohir.D05G347200 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.2e-08 64.3 151 30.5
Gohir.D05G354700 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.2e-08 64.3 147 33.3
Thecc.07G091100 Theobroma cacao HOM05D000101 ORTHO05D000089 1.2e-08 64.3 254 25.6
CAN.G1661.7 Capsicum annuum HOM05D000101 ORTHO05D000089 1.6e-08 63.9 257 26.1
Cc07_g18690 Coffea canephora HOM05D000101 ORTHO05D000089 1.6e-08 63.9 158 30.4
Gohir.D05G354400 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.6e-08 63.9 151 31.8
Gohir.D11G296616 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.6e-08 63.9 189 27.0
Gorai.007G319900 Gossypium raimondii HOM05D000101 ORTHO05D000089 1.6e-08 63.9 189 27.0
Thecc.07G137600 Theobroma cacao HOM05D000101 ORTHO05D000089 1.6e-08 63.9 235 25.5
Atru.chr2.2804 Acer truncatum HOM05D000101 ORTHO05D000089 2.1e-08 63.5 259 26.6
Dinv33560 Davidia involucrata HOM05D000101 ORTHO05D000089 2.1e-08 63.5 90 38.9
Actinidia19989 Actinidia chinensis HOM05D000101 ORTHO05D000089 2.7e-08 63.2 159 29.6
Duzib268G1835 Durio zibethinus HOM05D000101 ORTHO05D000089 2.7e-08 63.2 213 26.8
Gohir.D05G351100 Gossypium hirsutum HOM05D000101 ORTHO05D000089 2.7e-08 63.2 199 29.6
Gohir.D05G353400 Gossypium hirsutum HOM05D000101 ORTHO05D000089 2.7e-08 63.2 192 28.1
Gorai.009G381300 Gossypium raimondii HOM05D000101 ORTHO05D000089 2.7e-08 63.2 199 29.6
Gohir.A10G203800 Gossypium hirsutum HOM05D000101 ORTHO05D000089 3.6e-08 62.8 165 29.7
Potri.018G145566 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.6e-08 62.8 237 25.3
Duzib238G0002 Durio zibethinus HOM05D000101 ORTHO05D000089 4.7e-08 62.4 211 30.3
Duzib268G0704 Durio zibethinus HOM05D000101 ORTHO05D000089 4.7e-08 62.4 142 32.4
Gorai.009G385200 Gossypium raimondii HOM05D000101 ORTHO05D000089 4.7e-08 62.4 201 28.4
Oeu059283.1 Olea europaea HOM05D000101 ORTHO05D000089 4.7e-08 62.4 163 30.1
QL05p000767 Quercus lobata HOM05D000101 ORTHO05D000089 4.7e-08 62.4 230 26.5
Duzib213G0389 Durio zibethinus HOM05D000101 ORTHO05D000089 6.1e-08 62.0 260 24.2
Gorai.009G385600 Gossypium raimondii HOM05D000101 ORTHO05D000089 6.1e-08 62.0 144 29.9
Manes.10G029900 Manihot esculenta HOM05D000101 ORTHO05D000089 6.1e-08 62.0 242 26.9
QL05p077009 Quercus lobata HOM05D000101 ORTHO05D000089 6.1e-08 62.0 234 26.9
Thecc.07G090600 Theobroma cacao HOM05D000101 ORTHO05D000089 6.1e-08 62.0 200 26.5
CAN.G1661.5 Capsicum annuum HOM05D000101 ORTHO05D000089 8.0e-08 61.6 240 26.7
Dinv10264 Davidia involucrata HOM05D000101 ORTHO05D000089 8.0e-08 61.6 155 30.3
Potri.019G014364 Populus trichocarpa HOM05D000101 ORTHO05D000089 8.0e-08 61.6 224 28.6
Thecc.07G091200 Theobroma cacao HOM05D000101 ORTHO05D000089 8.0e-08 61.6 197 26.9
CAN.G135.41 Capsicum annuum HOM05D000101 ORTHO05D000089 1.4e-07 60.8 34 82.4
Gohir.D05G349900 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.4e-07 60.8 150 28.7
Potri.017G035300 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.4e-07 60.8 218 28.4
Potri.019G011826 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.4e-07 60.8 236 28.0
QL08p018214 Quercus lobata HOM05D000101 ORTHO05D000089 1.4e-07 60.8 121 31.4
Glyma.12G236500 Glycine max HOM05D000101 ORTHO05D000089 1.8e-07 60.5 219 26.9
Potri.019G013140 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.8e-07 60.5 233 25.3
Thecc.07G072400 Theobroma cacao HOM05D000101 ORTHO05D000089 1.8e-07 60.5 220 26.4
Cc00_g02120 Coffea canephora HOM05D000101 ORTHO05D000089 2.3e-07 60.1 246 24.4
Potri.018G136500 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.3e-07 60.1 246 25.6
Potri.019G014334 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.3e-07 60.1 231 25.1
COL.COLO4_32230 Corchorus olitorius HOM05D000101 ORTHO05D000089 3.0e-07 59.7 168 32.1
Duzib170G0171 Durio zibethinus HOM05D000101 ORTHO05D000089 3.0e-07 59.7 213 26.3
Gohir.D05G353200 Gossypium hirsutum HOM05D000101 ORTHO05D000089 3.0e-07 59.7 151 31.1
Gorai.009G379700 Gossypium raimondii HOM05D000101 ORTHO05D000089 3.0e-07 59.7 153 31.4
Thecc.07G072100 Theobroma cacao HOM05D000101 ORTHO05D000089 3.0e-07 59.7 261 25.7
Potri.019G020102 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.0e-07 59.3 235 26.8
Gohir.A04G033651 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.2e-07 58.9 90 41.1
Gohir.D05G349800 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.2e-07 58.9 153 31.4
Gohir.D05G352750 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.2e-07 58.9 154 32.5
Aqoxy4G00936 Aquilegia oxysepala HOM05D000101 ORTHO05D000089 6.8e-07 58.5 94 35.1
CAN.G1661.9 Capsicum annuum HOM05D000101 ORTHO05D000089 6.8e-07 58.5 154 29.2
Gorai.002G044900 Gossypium raimondii HOM05D000101 ORTHO05D000089 6.8e-07 58.5 225 27.1
Gorai.009G375100 Gossypium raimondii HOM05D000101 ORTHO05D000089 6.8e-07 58.5 151 29.1
Potri.019G020500 Populus trichocarpa HOM05D000101 ORTHO05D000089 6.8e-07 58.5 233 27.0
Gohir.D05G350300 Gossypium hirsutum HOM05D000101 ORTHO05D000089 8.8e-07 58.2 147 29.9
Potri.018G137900 Populus trichocarpa HOM05D000101 ORTHO05D000089 8.8e-07 58.2 237 26.2
Potri.019G011169 Populus trichocarpa HOM05D000101 ORTHO05D000089 8.8e-07 58.2 245 26.5
Actinidia18750 Actinidia chinensis HOM05D000101 ORTHO05D000089 1.2e-06 57.8 137 31.4
Gohir.D11G298400 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.2e-06 57.8 225 26.2
Potri.T045200 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.2e-06 57.8 252 25.4
Potri.T046001 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.2e-06 57.8 237 25.7
QL08p018687 Quercus lobata HOM05D000101 ORTHO05D000089 1.2e-06 57.8 152 29.6
Dinv00143 Davidia involucrata HOM05D000101 ORTHO05D000089 1.5e-06 57.4 148 30.4
Nitab4.5_0014215g0020 Nicotiana tabacum HOM05D000101 ORTHO05D000089 2.0e-06 57.0 25 100.0
Potri.018G145530 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.0e-06 57.0 215 26.5
Potri.T013300 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.0e-06 57.0 215 26.5
QL93p2023_0071 Quercus lobata HOM05D000101 ORTHO05D000089 2.0e-06 57.0 143 30.8
Rhsim04G0017900 Rhododendron simsii HOM05D000101 ORTHO05D000089 2.0e-06 57.0 127 30.7
Gorai.009G379900 Gossypium raimondii HOM05D000101 ORTHO05D000089 2.6e-06 56.6 90 37.8
Thecc.07G142200 Theobroma cacao HOM05D000101 ORTHO05D000089 2.6e-06 56.6 245 22.0
Aqoxy4G01257 Aquilegia oxysepala HOM05D000101 ORTHO05D000089 3.4e-06 56.2 94 34.0
Ciclev10007349m.g Citrus clementina HOM05D000101 ORTHO05D000089 3.4e-06 56.2 193 26.9
Migut.D01700 Erythranthe guttata HOM05D000101 ORTHO05D000089 3.4e-06 56.2 168 26.2
CAN.G1963.6 Capsicum annuum HOM05D000101 ORTHO05D000089 4.4e-06 55.8 182 26.9
Gohir.D05G355300 Gossypium hirsutum HOM05D000101 ORTHO05D000089 4.4e-06 55.8 90 37.8
Gorai.009G387600 Gossypium raimondii HOM05D000101 ORTHO05D000089 4.4e-06 55.8 90 37.8
Dinv19546 Davidia involucrata HOM05D000101 ORTHO05D000089 5.7e-06 55.5 146 28.8
Gohir.A04G033550 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.7e-06 55.5 106 34.9
Glyma.18G281700 Glycine max HOM05D001292 ORTHO05D001202 7.5e-06 55.1 207 28.0
Gorai.002G045000 Gossypium raimondii HOM05D000101 ORTHO05D000089 7.5e-06 55.1 109 33.9
Gorai.009G381800 Gossypium raimondii HOM05D000101 ORTHO05D000089 7.5e-06 55.1 153 32.7
Potri.T023966 Populus trichocarpa HOM05D000101 ORTHO05D000089 7.5e-06 55.1 252 25.4
Glyma.12G218500 Glycine max HOM05D000101 ORTHO05D000089 9.8e-06 54.7 214 27.6
Gohir.A01G046175 Gossypium hirsutum HOM05D000101 ORTHO05D000089 9.8e-06 54.7 87 39.1
Gohir.D05G350400 Gossypium hirsutum HOM05D000101 ORTHO05D000089 9.8e-06 54.7 263 24.3
Potri.019G014322 Populus trichocarpa HOM05D000101 ORTHO05D000089 9.8e-06 54.7 184 31.5


User provided reference genes

Program Settings