Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007260g0050 Nicotiana tabacum HOM05D002549 ORTHO05D002755 7.3e-35 150.2 87 100.0
Nitab4.5_0004056g0010 Nicotiana tabacum HOM05D002549 ORTHO05D002755 4.7e-26 120.9 84 83.3
Peaxi162Scf00984g00014 Petunia axillaris HOM05D002549 ORTHO05D002755 2.3e-20 102.1 84 64.3
Sopen12g002570 Solanum pennellii HOM05D002549 ORTHO05D002755 1.8e-17 92.4 78 65.4
PGSC0003DMG400020666 Solanum tuberosum HOM05D002549 ORTHO05D002755 3.1e-17 91.7 79 65.8
CAN.G377.7 Capsicum annuum HOM05D002549 ORTHO05D002755 2.6e-16 88.6 79 62.0
Peaxi162Scf00641g00003 Petunia axillaris HOM05D002549 ORTHO05D002755 6.4e-15 84.0 76 59.2
Cc06_g08750 Coffea canephora HOM05D002549 ORTHO05D002755 2.1e-10 68.9 76 50.0
Oeu015240.1 Olea europaea HOM05D002549 ORTHO05D002755 6.2e-10 67.4 79 48.1
Oeu033467.1 Olea europaea HOM05D002549 ORTHO05D002755 1.4e-09 66.2 79 44.3
arahy.Tifrunner.gnm1.ann1.62RLPM Arachis hypogaea HOM05D002549 ORTHO05D002755 1.8e-09 65.9 76 46.1
Glyma.08G210800 Glycine max HOM05D002549 ORTHO05D002755 3.1e-09 65.1 82 43.9
Lj3g0000921 Lotus japonicus HOM05D002549 ORTHO05D002755 3.1e-09 65.1 77 46.8
Atru.chr7.1209 Acer truncatum HOM05D002549 ORTHO05D002755 4.0e-09 64.7 89 46.1
arahy.Tifrunner.gnm1.ann1.CZ6M1X Arachis hypogaea HOM05D002549 ORTHO05D002755 4.0e-09 64.7 80 46.2
TPR.G38685 Trifolium pratense HOM05D002549 ORTHO05D002755 4.0e-09 64.7 77 45.5
Medtr4g011060 Medicago truncatula HOM05D002549 ORTHO05D002755 6.9e-09 63.9 78 42.3
Dinv41529 Davidia involucrata HOM05D002549 ORTHO05D002755 9.0e-09 63.5 76 47.4
Glyma.07G031900 Glycine max HOM05D002549 ORTHO05D002755 9.0e-09 63.5 80 47.5
MSTRG.11120 Avicennia marina HOM05D002549 ORTHO05D002755 1.2e-08 63.2 89 41.6
Eucgr.J03053 Eucalyptus grandis HOM05D002549 ORTHO05D002755 1.2e-08 63.2 98 44.9
Sed0026525 Sechium edule HOM05D002549 ORTHO05D002755 1.2e-08 63.2 83 45.8
Hma1.2p1_0665F.1_g199110 Hydrangea macrophylla HOM05D002549 ORTHO05D002755 1.5e-08 62.8 80 46.2
Actinidia26401 Actinidia chinensis HOM05D002549 ORTHO05D002755 3.4e-08 61.6 76 44.7
Manes.11G053601 Manihot esculenta HOM05D002549 ORTHO05D002755 3.4e-08 61.6 93 39.8
Actinidia07432 Actinidia chinensis HOM05D002549 ORTHO05D002755 4.4e-08 61.2 76 44.7
COL.COLO4_05774 Corchorus olitorius HOM05D002549 ORTHO05D002755 4.4e-08 61.2 76 47.4
Migut.I00796 Erythranthe guttata HOM05D002549 ORTHO05D002755 4.4e-08 61.2 81 43.2
Psat7g255840 Pisum sativum HOM05D002549 ORTHO05D002755 4.4e-08 61.2 93 40.9
QL05p027977 Quercus lobata HOM05D002549 ORTHO05D002755 4.4e-08 61.2 92 38.0
DCAR_017826 Daucus carota HOM05D002549 ORTHO05D002755 5.8e-08 60.8 78 42.3
Duzib187G0701 Durio zibethinus HOM05D002549 ORTHO05D002755 5.8e-08 60.8 76 40.8
Nn8g39394 Nelumbo nucifera HOM05D002549 ORTHO05D002755 5.8e-08 60.8 84 39.3
EL10Ac8g18620 Beta vulgaris HOM05D002549 ORTHO05D002755 7.6e-08 60.5 79 46.8
Gohir.D07G038900 Gossypium hirsutum HOM05D002549 ORTHO05D002755 7.6e-08 60.5 76 44.7
Gorai.001G041000 Gossypium raimondii HOM05D002549 ORTHO05D002755 7.6e-08 60.5 76 44.7
Psat7g255880 Pisum sativum HOM05D002549 ORTHO05D002755 7.6e-08 60.5 86 39.5
Potri.001G172100 Populus trichocarpa HOM05D002549 ORTHO05D002755 7.6e-08 60.5 95 38.9
PGR031G0796 Punica granatum HOM05D002549 ORTHO05D002755 7.6e-08 60.5 40 65.0
CSS0001526 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 1.3e-07 59.7 78 44.9
CSS0031007 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 1.3e-07 59.7 78 44.9
DCAR_009199 Daucus carota HOM05D002549 ORTHO05D002755 1.3e-07 59.7 77 46.8
Potri.003G062200 Populus trichocarpa HOM05D002549 ORTHO05D002755 1.3e-07 59.7 39 66.7
SGA_v2.0_scaffold37G14785 Striga asiatica HOM05D002549 ORTHO05D002755 1.7e-07 59.3 76 39.5
CSS0006659 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 2.2e-07 58.9 76 42.1
Lalb_Chr25g0279471 Lupinus albus HOM05D002549 ORTHO05D002755 2.2e-07 58.9 84 40.5
Gohir.A07G034900 Gossypium hirsutum HOM05D002549 ORTHO05D002755 2.9e-07 58.5 75 44.0
Manes.04G115900 Manihot esculenta HOM05D002549 ORTHO05D002755 2.9e-07 58.5 92 37.0
VMungo0331G1840 Vigna mungo HOM05D002549 ORTHO05D002755 2.9e-07 58.5 82 51.2
ClCG07G012770 Citrullus lanatus HOM05D002549 ORTHO05D002755 3.8e-07 58.2 86 40.7
Lsat_1_v5_gn_5_97080 Lactuca sativa HOM05D002549 ORTHO05D002755 4.9e-07 57.8 76 42.1
MSTRG.22728 Avicennia marina HOM05D002549 ORTHO05D002755 6.4e-07 57.4 40 65.0
Hma1.2p1_0515F.1_g170200 Hydrangea macrophylla HOM05D002549 ORTHO05D002755 6.4e-07 57.4 92 39.1
TPR.G8449 Trifolium pratense HOM05D002549 ORTHO05D002755 6.4e-07 57.4 92 38.0
Gorai.009G018700 Gossypium raimondii HOM05D002549 ORTHO05D002755 8.4e-07 57.0 80 41.2
Sabra01G0139600 Salix brachista HOM05D002549 ORTHO05D002755 8.4e-07 57.0 90 40.0
CSS0021729 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 1.1e-06 56.6 95 47.4
CSS0043623 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 1.1e-06 56.6 95 47.4
Gohir.D05G018300 Gossypium hirsutum HOM05D002549 ORTHO05D002755 1.1e-06 56.6 81 42.0
Hma1.2p1_0018F.1_g012630 Hydrangea macrophylla HOM05D002549 ORTHO05D002755 1.1e-06 56.6 76 38.2
Psat5g301360 Pisum sativum HOM05D002549 ORTHO05D002755 1.1e-06 56.6 95 38.9
Sed0016403 Sechium edule HOM05D002549 ORTHO05D002755 1.1e-06 56.6 85 41.2
Ah.14g080260 Amaranthus hybridus HOM05D002549 ORTHO05D002755 1.4e-06 56.2 78 44.9
Gohir.A05G017400 Gossypium hirsutum HOM05D002549 ORTHO05D002755 1.4e-06 56.2 80 41.2
CSS0010325 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 1.9e-06 55.8 90 36.7
CSS0036416 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 1.9e-06 55.8 90 36.7
CARHR192730 Cardamine hirsuta HOM05D002549 ORTHO05D002755 1.9e-06 55.8 82 37.8
MBI01_g37816_MAGBIO Magnolia biondii HOM05D002549 ORTHO05D002755 1.9e-06 55.8 84 38.1
unitig_899.g14782 Utricularia gibba HOM05D002549 ORTHO05D002755 2.4e-06 55.5 95 41.1
Duzib150G0928 Durio zibethinus HOM05D002549 ORTHO05D002755 3.2e-06 55.1 76 55.3
Duzib168G1278 Durio zibethinus HOM05D002549 ORTHO05D002755 3.2e-06 55.1 76 38.2
ATR1156G028 Amborella trichopoda HOM05D002549 ORTHO05D002755 4.2e-06 54.7 81 44.4
Cpa.g.sc10.229 Carica papaya HOM05D002549 ORTHO05D002755 4.2e-06 54.7 33 66.7
Dinv30577 Davidia involucrata HOM05D002549 ORTHO05D002755 4.2e-06 54.7 84 39.3
Phvul.005G175700 Phaseolus vulgaris HOM05D002549 ORTHO05D002755 4.2e-06 54.7 82 39.0
Sp6g24310 Schrenkiella parvula HOM05D002549 ORTHO05D002755 4.2e-06 54.7 80 38.8
VMungo1080G1223 Vigna mungo HOM05D002549 ORTHO05D002755 4.2e-06 54.7 84 36.9
Haze_25611 Corylus avellana HOM05D002549 ORTHO05D002755 5.4e-06 54.3 87 37.9
Gohir.A06G057200 Gossypium hirsutum HOM05D002549 ORTHO05D002755 5.4e-06 54.3 77 44.2
Nn2g11971 Nelumbo nucifera HOM05D002549 ORTHO05D002755 5.4e-06 54.3 84 39.3
MD02G1035000 Malus domestica HOM05D002549 ORTHO05D002755 7.1e-06 53.9 82 40.2
RcHm_v2.0_Chr2g0136461 Rosa chinensis HOM05D002549 ORTHO05D002755 7.1e-06 53.9 90 38.9
SalBow2G0396 Salvia bowleyana HOM05D002549 ORTHO05D002755 7.1e-06 53.9 35 65.7
Thecc.06G070600 Theobroma cacao HOM05D002549 ORTHO05D002755 7.1e-06 53.9 38 60.5
TAR383G0202 Trochodendron aralioides HOM05D002549 ORTHO05D002755 7.1e-06 53.9 84 34.5
Actinidia08809 Actinidia chinensis HOM05D002549 ORTHO05D002755 9.3e-06 53.5 79 40.5
Aa31sc453G10 Aethionema arabicum HOM05D002549 ORTHO05D002755 9.3e-06 53.5 79 39.2
Cc04_g04130 Coffea canephora HOM05D002549 ORTHO05D002755 9.3e-06 53.5 57 50.9
Thhalv10015056m.g Eutrema salsugineum HOM05D002549 ORTHO05D002755 9.3e-06 53.5 83 38.6
Glyma.13G364000 Glycine max HOM05D002549 ORTHO05D002755 9.3e-06 53.5 83 36.1
TPR.G10706 Trifolium pratense HOM05D002549 ORTHO05D002755 9.3e-06 53.5 76 43.4


User provided reference genes

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