Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007008g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 8.7e-81 303.5 147 100.0
Nitab4.5_0000623g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 6.9e-78 293.9 145 97.2
Peaxi162Scf00330g01216 Petunia axillaris HOM05D007311 ORTHO05D009011 5.3e-70 267.7 146 86.3
CAN.G22.34 Capsicum annuum HOM05D007311 ORTHO05D009011 7.6e-69 263.8 145 88.3
Solyc08g075070.3 Solanum lycopersicum HOM05D007311 ORTHO05D009011 1.1e-67 260.0 145 86.2
PGSC0003DMG400020814 Solanum tuberosum HOM05D007311 ORTHO05D009011 4.1e-62 241.5 173 72.3
Cc01_g03300 Coffea canephora HOM05D007311 ORTHO05D009011 6.5e-60 234.2 145 77.2
CiPaw.11G077300 Carya illinoinensis HOM05D007311 ORTHO05D009011 5.5e-59 231.1 146 73.3
Migut.E01383 Erythranthe guttata HOM05D007311 ORTHO05D009011 2.7e-58 228.8 146 75.3
QL12p002522 Quercus lobata HOM05D007311 ORTHO05D009011 6.1e-58 227.6 147 70.1
Prupe.5G015700 Prunus persica HOM05D007311 ORTHO05D009011 1.4e-57 226.5 145 69.0
Ciclev10002031m.g Citrus clementina HOM05D007311 ORTHO05D009011 5.1e-57 224.6 146 71.9
GSVIVG01036913001 Vitis vinifera HOM05D007311 ORTHO05D009011 5.1e-57 224.6 146 70.5
Oeu031947.3 Olea europaea HOM05D007311 ORTHO05D009011 1.9e-56 222.6 166 64.5
TWI32G0505 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 3.3e-56 221.9 146 71.2
TAR629G0827 Trochodendron aralioides HOM05D007311 ORTHO05D009011 3.3e-56 221.9 146 69.2
Nn3g18546 Nelumbo nucifera HOM05D007311 ORTHO05D009011 7.4e-56 220.7 145 69.0
Duzib205G2009 Durio zibethinus HOM05D007311 ORTHO05D009011 9.7e-56 220.3 146 69.2
MSTRG.1753 Avicennia marina HOM05D007311 ORTHO05D009011 2.2e-55 219.2 146 70.5
Potri.003G106700 Populus trichocarpa HOM05D007311 ORTHO05D009011 2.2e-55 219.2 147 71.4
Manes.15G187600 Manihot esculenta HOM05D007311 ORTHO05D009011 2.8e-55 218.8 146 68.5
Sabra03G0073500 Salix brachista HOM05D007311 ORTHO05D009011 3.7e-55 218.4 147 70.1
Glyma.19G247100 Glycine max HOM05D007311 ORTHO05D009011 6.3e-55 217.6 146 67.1
SalBow3G0367 Salvia bowleyana HOM05D007311 ORTHO05D009011 8.2e-55 217.2 146 70.5
Glyma.03G249600 Glycine max HOM05D007311 ORTHO05D009011 1.1e-54 216.9 146 65.8
Lalb_Chr15g0076111 Lupinus albus HOM05D007311 ORTHO05D009011 1.4e-54 216.5 146 67.8
RcHm_v2.0_Chr7g0214961 Rosa chinensis HOM05D007311 ORTHO05D009011 1.4e-54 216.5 146 67.8
PGR031G0344 Punica granatum HOM05D007311 ORTHO05D009011 4.1e-54 214.9 146 65.8
Hma1.2p1_0294F.1_g116450 Hydrangea macrophylla HOM05D007311 ORTHO05D009011 5.3e-54 214.5 147 69.4
Aqoxy102s011 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 6.9e-54 214.2 146 66.4
Aqoxy2G03516 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 6.9e-54 214.2 146 66.4
arahy.Tifrunner.gnm1.ann1.C28JQA Arachis hypogaea HOM05D007311 ORTHO05D009011 6.9e-54 214.2 146 65.8
arahy.Tifrunner.gnm1.ann1.M0M2WX Arachis hypogaea HOM05D007311 ORTHO05D009011 6.9e-54 214.2 146 65.8
Lj1g0003439 Lotus japonicus HOM05D007311 ORTHO05D009011 6.9e-54 214.2 146 65.8
Gohir.D08G169100 Gossypium hirsutum HOM05D007311 ORTHO05D009011 9.1e-54 213.8 146 67.8
AUR62039076 Chenopodium quinoa HOM05D007311 ORTHO05D009011 1.2e-53 213.4 145 65.5
Phvul.006G104200 Phaseolus vulgaris HOM05D007311 ORTHO05D009011 1.2e-53 213.4 146 66.4
VMungo0540G0453 Vigna mungo HOM05D007311 ORTHO05D009011 1.2e-53 213.4 146 67.1
COL.COLO4_16729 Corchorus olitorius HOM05D007311 ORTHO05D009011 2.0e-53 212.6 146 67.1
MD16G1286900 Malus domestica HOM05D007311 ORTHO05D009011 2.6e-53 212.2 146 67.1
THA.LOC104811225 Tarenaya hassleriana HOM05D007311 ORTHO05D009011 3.4e-53 211.8 146 63.7
HanXRQChr07g0198461 Helianthus annuus HOM05D007311 ORTHO05D009011 5.9e-53 211.1 147 66.7
TPR.G7011 Trifolium pratense HOM05D007311 ORTHO05D009011 1.3e-52 209.9 145 64.8
Ca_09529_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 1.7e-52 209.5 145 64.8
FAN08G0573 Fragaria x ananassa HOM05D007311 ORTHO05D009011 2.2e-52 209.1 144 65.3
FvH4_5g24490 Fragaria vesca HOM05D007311 ORTHO05D009011 5.0e-52 208.0 170 57.6
Gohir.A08G147900 Gossypium hirsutum HOM05D007311 ORTHO05D009011 8.5e-52 207.2 146 67.1
Psat0s3161g0160 Pisum sativum HOM05D007311 ORTHO05D009011 8.5e-52 207.2 145 65.5
FAN18G0784 Fragaria x ananassa HOM05D007311 ORTHO05D009011 1.4e-51 206.5 170 57.1
Cfa012633 Carpinus fangiana HOM05D007311 ORTHO05D009011 2.5e-51 205.7 136 70.6
Thecc.03G322100 Theobroma cacao HOM05D007311 ORTHO05D009011 3.2e-51 205.3 152 66.4
vmacro22112 Vaccinium macrocarpon HOM05D007311 ORTHO05D009011 3.2e-51 205.3 169 62.1
DCAR_030948 Daucus carota HOM05D007311 ORTHO05D009011 4.2e-51 204.9 146 65.8
PSO210G1792 Papaver somniferum HOM05D007311 ORTHO05D009011 4.2e-51 204.9 146 64.4
Eucgr.E01832 Eucalyptus grandis HOM05D007311 ORTHO05D009011 7.2e-51 204.1 147 67.3
Lsat_1_v5_gn_9_12020 Lactuca sativa HOM05D007311 ORTHO05D009011 7.2e-51 204.1 146 65.1
ECA233G4235 Erigeron canadensis HOM05D007311 ORTHO05D009011 9.4e-51 203.8 149 64.4
EL10Ac9g22274 Beta vulgaris HOM05D007311 ORTHO05D009011 1.2e-50 203.4 145 62.8
Medtr7g115450 Medicago truncatula HOM05D007311 ORTHO05D009011 2.7e-50 202.2 145 63.4
Medtr7g115470 Medicago truncatula HOM05D007311 ORTHO05D009011 2.7e-50 202.2 145 63.4
PSO238G0022 Papaver somniferum HOM05D007311 ORTHO05D009011 2.7e-50 202.2 146 63.7
Haze_08033 Corylus avellana HOM05D007311 ORTHO05D009011 7.9e-50 200.7 212 50.0
CANSAT35G1819 Cannabis sativa HOM05D000351 ORTHO05D000250 1.4e-49 199.9 151 62.3
ClCG07G011190 Citrullus lanatus HOM05D000351 ORTHO05D000250 1.4e-49 199.9 146 60.3
MELO3C016211.2 Cucumis melo HOM05D007311 ORTHO05D009011 3.9e-49 198.4 146 61.6
CsaV3_4G007060 Cucumis sativus L. HOM05D007311 ORTHO05D009011 3.9e-49 198.4 146 61.6
SGA_v2.0_scaffold144G35891 Striga asiatica HOM05D007311 ORTHO05D009011 3.9e-49 198.4 163 60.7
Aa31LG6G2000 Aethionema arabicum HOM05D007311 ORTHO05D009011 6.7e-49 197.6 146 63.0
Hund06317 Selenicereus undatus HOM05D007311 ORTHO05D009011 6.7e-49 197.6 146 62.3
Sed0011898 Sechium edule HOM05D000351 ORTHO05D000250 1.1e-48 196.8 145 60.7
unitig_899.g14733 Utricularia gibba HOM05D007311 ORTHO05D009011 1.1e-48 196.8 147 65.3
Gorai.004G176300 Gossypium raimondii HOM05D007311 ORTHO05D009011 2.6e-48 195.7 184 53.8
CDE11G0786 Ceratophyllum demersum HOM05D007311 ORTHO05D009011 7.4e-48 194.1 146 63.0
HPP92_005283 Vanilla planifolia HOM05D007311 ORTHO05D009011 7.4e-48 194.1 144 60.4
BcaC09g51414 Brassica carinata HOM05D007311 ORTHO05D009011 2.8e-47 192.2 146 58.9
Sp7g18020 Schrenkiella parvula HOM05D007311 ORTHO05D009011 2.8e-47 192.2 146 59.6
BraA01t01079Z Brassica rapa HOM05D007311 ORTHO05D009011 1.1e-46 190.3 146 57.5
C01p13360 Brassica napus HOM05D007311 ORTHO05D009011 1.4e-46 189.9 146 58.2
Thhalv10024796m.g Eutrema salsugineum HOM05D000351 ORTHO05D009011 1.4e-46 189.9 146 59.6
A01p11360 Brassica napus HOM05D000351 ORTHO05D009011 2.4e-46 189.1 146 56.8
CARHR226190 Cardamine hirsuta HOM05D007311 ORTHO05D009011 2.4e-46 189.1 146 59.6
ATR0796G066 Amborella trichopoda HOM05D007311 ORTHO05D009011 5.3e-46 188.0 146 61.0
Carub.0007s2183 Capsella rubella HOM05D007311 ORTHO05D009011 5.3e-46 188.0 147 58.5
MBI03_g29283_MAGBIO Magnolia biondii HOM05D006174 ORTHO05D007987 1.2e-45 186.8 125 68.0
AT4G19400 Arabidopsis thaliana HOM05D007311 ORTHO05D009011 3.4e-45 185.3 147 57.8
AT4G19410 Arabidopsis thaliana HOM05D000351 ORTHO05D009011 3.4e-45 185.3 147 57.8
BcaNung01781 Brassica carinata HOM05D007311 ORTHO05D009011 7.7e-45 184.1 146 56.2
QL12p002612 Quercus lobata HOM05D007311 ORTHO05D009011 7.7e-45 184.1 145 59.3
AL7G34740 Arabidopsis lyrata HOM05D007311 ORTHO05D009011 1.3e-44 183.3 147 57.1
Sc18g0005580 Simmondsia chinensis HOM05D007311 ORTHO05D009011 6.5e-44 181.0 134 61.9
AUR62010310 Chenopodium quinoa HOM05D007311 ORTHO05D009011 1.9e-43 179.5 119 65.5
Cpa.g.sc542.2 Carica papaya HOM05D007311 ORTHO05D009011 2.1e-42 176.0 124 67.7
CSS0046759 Camellia sinensis var. sinensis HOM05D007311 ORTHO05D009011 4.7e-42 174.9 109 75.2
Zm00001eb284430 Zea mays HOM05D007311 ORTHO05D009011 1.1e-40 170.2 145 53.1
Sopen08g023700 Solanum pennellii HOM05D007311 ORTHO05D009011 5.7e-40 167.9 94 85.1
Dinv37446 Davidia involucrata HOM05D007311 ORTHO05D009011 2.9e-36 155.6 102 67.6
Os05g0241400 Oryza sativa ssp. japonica HOM05D007311 ORTHO05D009011 8.2e-31 137.5 117 53.0
TWI60G1527 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 1.4e-30 136.7 146 51.4
Ah.01g011070 Amaranthus hybridus HOM05D007311 ORTHO05D009011 8.0e-26 120.9 102 54.9
SEGI_31752 Sequoiadendron giganteum HOM05D007311 ORTHO05D009011 2.8e-23 112.5 99 49.5
Eucgr.E01790 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.1e-22 110.5 82 67.1
AagrBONN_evm.TU.Sc2ySwM_228.4293 Anthoceros agrestis HOM05D007311 ORTHO05D009011 2.3e-20 102.8 147 32.7
Eucgr.E01869 Eucalyptus grandis HOM05D007311 ORTHO05D009011 2.1e-18 96.3 64 67.2
SalBow1G6002 Salvia bowleyana HOM05D007311 ORTHO05D009011 1.8e-17 93.2 64 68.8
SalBow8G5581 Salvia bowleyana HOM05D007311 ORTHO05D009011 3.0e-17 92.4 65 66.2
SMO139G0010 Selaginella moellendorffii HOM05D007311 ORTHO05D009011 1.2e-16 90.5 151 32.5
Rhsim07G0141400 Rhododendron simsii HOM05D000351 ORTHO05D000250 4.4e-16 88.6 126 42.1
Ciclev10003443m.g Citrus clementina HOM05D007311 ORTHO05D009011 1.3e-15 87.0 78 56.4
BcaC02g07636 Brassica carinata HOM05D007311 ORTHO05D009011 3.7e-15 85.5 101 44.6
Mapoly0040s0015 Marchantia polymorpha HOM05D007311 ORTHO05D009011 7.8e-13 77.8 146 28.8
Medtr5g045430 Medicago truncatula HOM05D007311 ORTHO05D009011 1.9e-11 73.2 64 56.2
FAN13G1634 Fragaria x ananassa HOM05D007311 ORTHO05D009011 2.5e-11 72.8 45 68.9
Zm00001eb347540 Zea mays HOM05D007311 ORTHO05D009011 1.3e-07 60.5 66 47.0
Ca_12103_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 2.9e-07 59.3 38 63.2


User provided reference genes

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