Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006892g0010 Nicotiana tabacum HOM05D003374 ORTHO05D009470 1.9e-113 412.5 213 100.0
Nitab4.5_0002105g0080 Nicotiana tabacum HOM05D003374 ORTHO05D009470 5.5e-84 314.7 173 93.1
Sopen02g028160 Solanum pennellii HOM05D003374 ORTHO05D009470 4.3e-65 251.9 173 75.1
PGSC0003DMG400003663 Solanum tuberosum HOM05D003374 ORTHO05D009470 1.7e-64 250.0 173 76.9
Peaxi162Scf00328g00118 Petunia axillaris HOM05D003374 ORTHO05D009470 3.4e-62 242.3 175 77.7
CAN.G890.28 Capsicum annuum HOM05D003374 ORTHO05D009470 3.9e-58 228.8 173 72.8
Cc07_g11310 Coffea canephora HOM05D003374 ORTHO05D009470 1.5e-41 173.7 181 53.6
Cc08_g04880 Coffea canephora HOM05D003374 ORTHO05D009470 1.5e-41 173.7 181 53.6
Dinv08548 Davidia involucrata HOM05D003374 ORTHO05D009470 4.7e-35 152.1 131 65.6
Hma1.2p1_0315F.1_g122600 Hydrangea macrophylla HOM05D003374 ORTHO05D009470 1.0e-34 151.0 133 61.7
Cfa007029 Carpinus fangiana HOM05D003374 ORTHO05D009470 1.8e-34 150.2 179 54.7
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 4.0e-34 149.1 183 52.5
vmacro20496 Vaccinium macrocarpon HOM05D003374 ORTHO05D009470 1.5e-33 147.1 139 59.0
Potri.005G107800 Populus trichocarpa HOM05D003374 ORTHO05D009470 4.4e-33 145.6 131 60.3
QL06p052079 Quercus lobata HOM05D003374 ORTHO05D009470 1.7e-32 143.7 176 54.0
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 2.2e-32 143.3 181 51.9
Rhsim10G0205800 Rhododendron simsii HOM05D003374 ORTHO05D009470 2.8e-32 142.9 170 54.7
Thecc.01G011500 Theobroma cacao HOM05D003374 ORTHO05D009470 1.4e-31 140.6 134 59.0
TAR625G1139 Trochodendron aralioides HOM05D003374 ORTHO05D009470 1.4e-31 140.6 129 58.1
Sabra05G0088300 Salix brachista HOM05D003374 ORTHO05D009470 1.8e-31 140.2 140 55.7
Manes.02G110400 Manihot esculenta HOM05D003374 ORTHO05D009470 4.1e-31 139.0 134 56.0
Ciclev10026638m.g Citrus clementina HOM05D003374 ORTHO05D009470 1.6e-30 137.1 177 50.3
Solyc02g083380.3 Solanum lycopersicum HOM05D003374 ORTHO05D009470 1.6e-30 137.1 72 87.5
CiPaw.08G125800 Carya illinoinensis HOM05D003374 ORTHO05D009470 2.7e-30 136.3 180 50.6
PSO675G4674 Papaver somniferum HOM05D003374 ORTHO05D009470 2.7e-30 136.3 178 48.3
Medtr5g022970 Medicago truncatula HOM05D003374 ORTHO05D009470 3.5e-30 136.0 183 50.3
Duzib145G0002 Durio zibethinus HOM05D003374 ORTHO05D009470 5.9e-30 135.2 134 59.0
PSO541G4788 Papaver somniferum HOM05D003374 ORTHO05D009470 1.7e-29 133.7 133 54.1
Prupe.7G175000 Prunus persica HOM05D003374 ORTHO05D009470 1.7e-29 133.7 140 54.3
RcHm_v2.0_Chr2g0098351 Rosa chinensis HOM05D003374 ORTHO05D009470 2.3e-29 133.3 177 46.3
Atru.chr3.907 Acer truncatum HOM05D003374 ORTHO05D009470 2.9e-29 132.9 137 55.5
Gohir.D03G005500 Gossypium hirsutum HOM05D003374 ORTHO05D009470 2.9e-29 132.9 135 56.3
Gorai.003G005900 Gossypium raimondii HOM05D003374 ORTHO05D009470 2.9e-29 132.9 135 56.3
Ca_24942_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009470 3.8e-29 132.5 187 48.7
MBI09_g46000_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009470 8.6e-29 131.3 120 60.0
Eucgr.I02305 Eucalyptus grandis HOM05D003374 ORTHO05D009470 1.5e-28 130.6 138 54.3
Gohir.A02G174300 Gossypium hirsutum HOM05D003374 ORTHO05D009470 3.3e-28 129.4 135 57.0
CANSAT01G1253 Cannabis sativa HOM05D003374 ORTHO05D009470 7.3e-28 128.3 133 51.1
MSTRG.22233 Avicennia marina HOM05D003374 ORTHO05D009470 1.2e-27 127.5 132 53.8
FAN28G2426 Fragaria x ananassa HOM05D003374 ORTHO05D009470 1.2e-27 127.5 141 50.4
MD15G1237400 Malus domestica HOM05D003374 ORTHO05D009470 1.2e-27 127.5 132 53.0
FAN26G1101 Fragaria x ananassa HOM05D003374 ORTHO05D009470 1.6e-27 127.1 141 50.4
Phvul.002G104800 Phaseolus vulgaris HOM05D003374 ORTHO05D009470 1.6e-27 127.1 139 51.1
FAN23G1041 Fragaria x ananassa HOM05D003374 ORTHO05D009470 2.8e-27 126.3 141 49.6
FvH4_1g11080 Fragaria vesca HOM05D003374 ORTHO05D009470 1.4e-26 124.0 141 50.4
Cpa.g.sc6.313 Carica papaya HOM05D003374 ORTHO05D009470 1.8e-26 123.6 138 51.4
Lj2g0014457 Lotus japonicus HOM05D003374 ORTHO05D009470 1.8e-26 123.6 135 52.6
TWI73G0454 Tripterygium wilfordii HOM05D003374 ORTHO05D009470 1.8e-26 123.6 178 44.4
CDE05G2149 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 4.0e-26 122.5 130 49.2
PGR102G2171 Punica granatum HOM05D003374 ORTHO05D009470 5.2e-26 122.1 159 45.9
Glyma.11G080800 Glycine max HOM05D003374 ORTHO05D009470 1.2e-25 120.9 149 45.6
VMungo1215G1047 Vigna mungo HOM05D003374 ORTHO05D009470 1.5e-25 120.6 127 53.5
MSTRG.24362 Avicennia marina HOM05D003374 ORTHO05D009470 2.6e-25 119.8 131 51.9
Lalb_Chr05g0212181 Lupinus albus HOM05D003374 ORTHO05D009470 3.4e-25 119.4 148 50.0
Oeu022073.1 Olea europaea HOM05D003374 ORTHO05D009470 4.4e-25 119.0 144 50.7
Lalb_Chr09g0321441 Lupinus albus HOM05D003374 ORTHO05D009470 1.3e-24 117.5 123 54.5
Aqoxy6G01986 Aquilegia oxysepala HOM05D003374 ORTHO05D009470 4.9e-24 115.5 137 45.3
Potri.005G107900 Populus trichocarpa HOM05D003374 ORTHO05D009470 1.1e-23 114.4 106 56.6
CDE05G3297 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 1.8e-23 113.6 130 46.2
EL10Ac9g21336 Beta vulgaris HOM05D003374 ORTHO05D009470 3.2e-23 112.8 120 53.3
Glyma.01G162500 Glycine max HOM05D003374 ORTHO05D009470 3.2e-23 112.8 143 45.5
SalBow6G5967 Salvia bowleyana HOM05D003374 ORTHO05D009470 3.2e-23 112.8 130 50.8
C07p05580 Brassica napus HOM05D003374 ORTHO05D009470 1.2e-22 110.9 175 42.9
FAN19G0939 Fragaria x ananassa HOM05D003374 ORTHO05D009470 1.2e-22 110.9 154 45.5
Migut.N02761 Erythranthe guttata HOM05D003374 ORTHO05D009470 2.7e-22 109.8 120 49.2
Aa31LG8G14990 Aethionema arabicum HOM05D003374 ORTHO05D009470 5.9e-22 108.6 157 43.3
AT2G17710 Arabidopsis thaliana HOM05D003374 ORTHO05D009470 5.9e-22 108.6 171 40.9
SalBow8G5385 Salvia bowleyana HOM05D003374 ORTHO05D009470 5.9e-22 108.6 128 47.7
Duzib147G0965 Durio zibethinus HOM05D003374 ORTHO05D009470 1.7e-21 107.1 102 61.8
Sp3g31120 Schrenkiella parvula HOM05D003374 ORTHO05D009470 1.7e-21 107.1 138 44.2
AL3G50710 Arabidopsis lyrata HOM05D003374 ORTHO05D009470 2.3e-21 106.7 139 43.2
THA.LOC104819731 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 3.0e-21 106.3 140 40.7
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 3.9e-21 105.9 177 42.4
Carub.0003s3182 Capsella rubella HOM05D003374 ORTHO05D009470 3.9e-21 105.9 132 47.7
BcaB03g16544 Brassica carinata HOM05D003374 ORTHO05D009470 6.6e-21 105.1 162 43.2
Actinidia22937 Actinidia chinensis HOM05D003374 ORTHO05D009470 1.1e-20 104.4 109 55.0
Thhalv10022897m.g Eutrema salsugineum HOM05D003374 ORTHO05D009470 1.1e-20 104.4 132 43.9
BraA07t28128Z Brassica rapa HOM05D003374 ORTHO05D009470 1.5e-20 104.0 132 44.7
GSVIVG01005193001 Vitis vinifera HOM05D003374 ORTHO05D009470 1.5e-20 104.0 114 54.4
CARHR108000 Cardamine hirsuta HOM05D003374 ORTHO05D009470 2.5e-20 103.2 132 43.2
AUR62012999 Chenopodium quinoa HOM05D003374 ORTHO05D009470 3.3e-20 102.8 131 45.8
BcaC06g36303 Brassica carinata HOM05D003374 ORTHO05D009470 7.3e-20 101.7 228 36.0
BcaB08g34755 Brassica carinata HOM05D003374 ORTHO05D009470 9.5e-20 101.3 132 44.7
BcaC01g02894 Brassica carinata HOM05D003374 ORTHO05D009470 9.5e-20 101.3 159 41.5
C03p58640 Brassica napus HOM05D003374 ORTHO05D009470 9.5e-20 101.3 159 41.5
BolC3t18125H Brassica oleracea HOM05D003374 ORTHO05D009470 9.5e-20 101.3 159 41.5
A06p33690 Brassica napus HOM05D003374 ORTHO05D009470 8.0e-19 98.2 160 42.5
BraA06t26303Z Brassica rapa HOM05D003374 ORTHO05D009470 8.0e-19 98.2 160 42.5
COL.COLO4_22495 Corchorus olitorius HOM05D003374 ORTHO05D009470 4.4e-17 92.4 87 58.6
THA.LOC104804280 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 6.4e-16 88.6 144 39.6
Sc18g0006270 Simmondsia chinensis HOM05D003374 ORTHO05D009470 1.4e-15 87.4 91 57.1
Hund00012 Selenicereus undatus HOM05D003374 ORTHO05D009470 1.7e-13 80.5 110 48.2
unitig_578.g16135 Utricularia gibba HOM05D003374 ORTHO05D009470 1.7e-13 80.5 101 39.6
TPR.G25136 Trifolium pratense HOM05D000373 ORTHO05D001763 1.6e-11 73.9 112 41.1
Ah.01g008140 Amaranthus hybridus HOM05D003374 ORTHO05D009470 1.8e-10 70.5 89 49.4
TPR.G20269 Trifolium pratense HOM05D003374 ORTHO05D009470 6.8e-10 68.6 83 49.4
Actinidia17405 Actinidia chinensis HOM05D000373 ORTHO05D001763 8.9e-10 68.2 58 58.6
arahy.Tifrunner.gnm1.ann1.HG61QK Arachis hypogaea HOM05D003374 ORTHO05D009470 4.4e-09 65.9 100 44.0
arahy.Tifrunner.gnm1.ann1.YP763J Arachis hypogaea HOM05D003374 ORTHO05D009470 4.4e-09 65.9 100 44.0
Duzib145G0007 Durio zibethinus HOM05D003374 ORTHO05D009470 1.9e-07 60.5 58 60.3
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 4.1e-07 59.3 94 39.4
ATR0346G001 Amborella trichopoda HOM05D003374 ORTHO05D009470 9.2e-07 58.2 87 41.4
AUR62010008 Chenopodium quinoa HOM05D003374 ORTHO05D010386 1.6e-06 57.4 63 50.8
CANSAT25G0460 Cannabis sativa HOM05D004108 ORTHO05D004849 4.6e-06 55.8 119 28.6


User provided reference genes

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