Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006661g0030 Nicotiana tabacum HOM05D002758 ORTHO05D002885 2.1e-46 188.7 99 100.0
Nitab4.5_0000028g0360 Nicotiana tabacum HOM05D002758 ORTHO05D002885 3.6e-38 161.4 94 93.6
CAN.G403.8 Capsicum annuum HOM05D002758 ORTHO05D002885 3.3e-31 138.3 96 81.2
Sopen07g004170 Solanum pennellii HOM05D002758 ORTHO05D002885 6.8e-29 130.6 95 78.9
Solyc07g008280.4 Solanum lycopersicum HOM05D002758 ORTHO05D002885 1.3e-27 126.3 95 77.9
PGSC0003DMG400019894 Solanum tuberosum HOM05D002758 ORTHO05D002885 1.1e-26 123.2 100 73.0
Peaxi162Scf00046g00524 Petunia axillaris HOM05D002758 ORTHO05D002885 3.6e-22 108.2 95 69.5
Cc06_g08410 Coffea canephora HOM05D002758 ORTHO05D002885 3.5e-17 91.7 99 58.6
Hma1.2p1_0018F.1_g012340 Hydrangea macrophylla HOM05D002758 ORTHO05D002885 1.5e-15 86.3 87 57.5
Actinidia40476 Actinidia chinensis HOM05D002758 ORTHO05D002885 1.9e-15 85.9 96 54.2
Oeu034104.1 Olea europaea HOM05D002758 ORTHO05D002885 9.5e-15 83.6 95 53.7
vmacro20564 Vaccinium macrocarpon HOM05D002758 ORTHO05D002885 1.2e-14 83.2 88 54.5
Dinv36518 Davidia involucrata HOM05D002758 ORTHO05D002885 1.6e-14 82.8 97 50.5
Oeu058050.1 Olea europaea HOM05D002758 ORTHO05D002885 3.1e-13 78.6 81 56.8
SalBow1G1971 Salvia bowleyana HOM05D002758 ORTHO05D002885 8.9e-13 77.0 96 50.0
Ciclev10009903m.g Citrus clementina HOM05D002758 ORTHO05D002885 1.5e-12 76.3 95 48.4
EL10Ac8g18667 Beta vulgaris HOM05D002758 ORTHO05D002885 3.4e-12 75.1 101 46.5
Potri.018G131100 Populus trichocarpa HOM05D002758 ORTHO05D002885 4.4e-12 74.7 91 50.5
DCAR_017810 Daucus carota HOM05D002758 ORTHO05D002885 3.7e-11 71.6 96 45.8
Rhsim01G0069000 Rhododendron simsii HOM05D002758 ORTHO05D002885 3.7e-11 71.6 94 48.9
DCAR_014886 Daucus carota HOM05D002758 ORTHO05D002885 6.4e-11 70.9 94 45.7
Actinidia21981 Actinidia chinensis HOM05D002758 ORTHO05D002885 1.1e-10 70.1 94 46.8
MSTRG.10674 Avicennia marina HOM05D002758 ORTHO05D002885 1.9e-10 69.3 79 48.1
Potri.006G069100 Populus trichocarpa HOM05D002758 ORTHO05D002885 4.1e-10 68.2 90 48.9
Hund09249 Selenicereus undatus HOM05D002758 ORTHO05D002885 4.1e-10 68.2 99 44.4
Lsat_1_v5_gn_5_95300 Lactuca sativa HOM05D002758 ORTHO05D002885 5.4e-10 67.8 90 47.8
Hund26508 Selenicereus undatus HOM05D002758 ORTHO05D002885 5.4e-10 67.8 99 47.5
Actinidia01753 Actinidia chinensis HOM05D002758 ORTHO05D002885 1.2e-09 66.6 93 44.1
Duzib150G0461 Durio zibethinus HOM05D002758 ORTHO05D002885 2.1e-09 65.9 92 45.7
Migut.K00449 Erythranthe guttata HOM05D002758 ORTHO05D002885 2.1e-09 65.9 80 50.0
Manes.06G058000 Manihot esculenta HOM05D002758 ORTHO05D002885 2.7e-09 65.5 101 46.5
GSVIVG01015544001 Vitis vinifera HOM05D002758 ORTHO05D002885 2.7e-09 65.5 104 44.2
HanXRQChr10g0315561 Helianthus annuus HOM05D002758 ORTHO05D002885 3.5e-09 65.1 90 44.4
Nn2g12045 Nelumbo nucifera HOM05D002758 ORTHO05D002885 4.6e-09 64.7 93 49.5
CiPaw.04G171600 Carya illinoinensis HOM05D002758 ORTHO05D002885 6.0e-09 64.3 100 45.0
MD15G1172200 Malus domestica HOM05D002758 ORTHO05D002885 6.0e-09 64.3 94 44.7
AUR62011138 Chenopodium quinoa HOM05D002758 ORTHO05D002885 7.8e-09 63.9 95 47.4
Prupe.7G243900 Prunus persica HOM05D002758 ORTHO05D002885 7.8e-09 63.9 98 43.9
HanXRQChr12g0356261 Helianthus annuus HOM05D002758 ORTHO05D002885 1.3e-08 63.2 91 46.2
Nn8g39466 Nelumbo nucifera HOM05D002758 ORTHO05D002885 1.3e-08 63.2 93 44.1
Sed0027515 Sechium edule HOM05D002758 ORTHO05D002885 1.3e-08 63.2 93 41.9
TAR383G0328 Trochodendron aralioides HOM05D002758 ORTHO05D002885 1.3e-08 63.2 93 44.1
ClCG06G011200 Citrullus lanatus HOM05D002758 ORTHO05D002885 2.3e-08 62.4 90 43.3
Duzib187G0530 Durio zibethinus HOM05D002758 ORTHO05D002885 3.0e-08 62.0 95 44.2
Thecc.09G127400 Theobroma cacao HOM05D002758 ORTHO05D002885 3.0e-08 62.0 94 42.6
ECA240G3055 Erigeron canadensis HOM05D002758 ORTHO05D002885 3.9e-08 61.6 93 45.2
Eucgr.C01181 Eucalyptus grandis HOM05D002758 ORTHO05D002885 3.9e-08 61.6 92 46.7
MD02G1030600 Malus domestica HOM05D002758 ORTHO05D002885 3.9e-08 61.6 94 45.7
Lsat_1_v5_gn_7_45161 Lactuca sativa HOM05D002758 ORTHO05D002885 5.1e-08 61.2 97 43.3
MELO3C010338.2 Cucumis melo HOM05D002758 ORTHO05D002885 1.9e-07 59.3 81 42.0
CiPaw.03G244800 Carya illinoinensis HOM05D002758 ORTHO05D002885 2.5e-07 58.9 101 43.6
Sabra06G0051500 Salix brachista HOM05D002758 ORTHO05D002885 5.6e-07 57.8 86 43.0
Glyma.04G147200 Glycine max HOM05D002758 ORTHO05D002885 7.3e-07 57.4 100 44.0
Medtr4g114600 Medicago truncatula HOM05D002758 ORTHO05D002885 9.5e-07 57.0 108 40.7
QL02p088621 Quercus lobata HOM05D002758 ORTHO05D002885 9.5e-07 57.0 82 43.9
TAR626G0616 Trochodendron aralioides HOM05D002758 ORTHO05D002885 9.5e-07 57.0 84 46.4
Actinidia15774 Actinidia chinensis HOM05D002758 ORTHO05D002885 1.2e-06 56.6 85 43.5
BcaC08g43429 Brassica carinata HOM05D002758 ORTHO05D002885 1.2e-06 56.6 103 42.7
CANSAT11G2365 Cannabis sativa HOM05D002758 ORTHO05D002885 1.2e-06 56.6 102 41.2
CsaV3_1G030210 Cucumis sativus L. HOM05D002758 ORTHO05D002885 1.2e-06 56.6 81 40.7
Duzib235G1225 Durio zibethinus HOM05D002758 ORTHO05D002885 1.2e-06 56.6 93 45.2
HanXRQChr09g0241961 Helianthus annuus HOM05D002758 ORTHO05D002885 1.2e-06 56.6 87 44.8
PSO210G4958 Papaver somniferum HOM05D002758 ORTHO05D002885 1.2e-06 56.6 95 38.9
BolC6t35882H Brassica oleracea HOM05D002758 ORTHO05D002885 2.1e-06 55.8 103 42.7
Glyma.17G114300 Glycine max HOM05D002758 ORTHO05D002885 2.1e-06 55.8 98 42.9
Sed0025517 Sechium edule HOM05D002758 ORTHO05D002885 2.8e-06 55.5 94 41.5
FAN23G2585 Fragaria x ananassa HOM05D002758 ORTHO05D002885 3.6e-06 55.1 90 44.4
HanXRQChr04g0096561 Helianthus annuus HOM05D002758 ORTHO05D002885 3.6e-06 55.1 95 41.1
PSO210G1692 Papaver somniferum HOM05D002758 ORTHO05D002885 3.6e-06 55.1 95 38.9
Sc18g0000570 Simmondsia chinensis HOM05D002758 ORTHO05D002885 3.6e-06 55.1 102 39.2
Ca_21675_v3 Cicer arietinum L. HOM05D002758 ORTHO05D002885 4.7e-06 54.7 107 43.0
Duzib168G0478 Durio zibethinus HOM05D002758 ORTHO05D002885 4.7e-06 54.7 83 44.6
ECA234G1831 Erigeron canadensis HOM05D002758 ORTHO05D002885 4.7e-06 54.7 89 40.4
Lalb_Chr13g0301821 Lupinus albus HOM05D002758 ORTHO05D002885 8.1e-06 53.9 104 40.4
vmacro18989 Vaccinium macrocarpon HOM05D002758 ORTHO05D002885 8.1e-06 53.9 103 40.8
GSVIVG01017318001 Vitis vinifera HOM05D002758 ORTHO05D002885 8.1e-06 53.9 93 39.8


User provided reference genes

Program Settings