Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 2.0e-214 748.8 369 100.0
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 1.0e-207 726.5 369 96.5
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 6.2e-184 647.5 374 88.0
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 3.1e-183 645.2 374 87.2
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 3.5e-179 631.7 373 85.3
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 1.9e-161 572.8 383 77.3
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 6.6e-154 547.7 380 72.1
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 5.6e-153 544.7 377 73.5
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 3.6e-152 542.0 383 70.8
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 8.1e-152 540.8 380 73.4
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 1.1e-151 540.4 371 74.4
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 1.1e-151 540.4 377 71.9
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 3.1e-151 538.9 377 71.9
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 2.6e-150 535.8 374 73.8
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 1.6e-147 526.6 381 71.7
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 3.5e-147 525.4 362 73.8
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 4.6e-147 525.0 371 72.0
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 6.0e-147 524.6 374 71.4
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 1.0e-146 523.9 374 71.1
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 1.8e-146 523.1 297 84.2
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 6.7e-146 521.2 305 82.3
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 1.9e-145 519.6 304 79.9
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.3e-145 518.8 296 83.4
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.3e-145 518.8 296 83.4
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 5.6e-145 518.1 312 79.8
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 5.6e-145 518.1 305 81.6
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 5.6e-145 518.1 296 83.4
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 7.4e-145 517.7 296 83.1
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 9.6e-145 517.3 380 68.9
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 9.6e-145 517.3 296 83.1
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 9.6e-145 517.3 343 72.9
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 9.6e-145 517.3 374 71.1
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 1.3e-144 516.9 305 81.0
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 1.3e-144 516.9 371 69.0
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 1.6e-144 516.5 369 70.2
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 1.6e-144 516.5 313 76.7
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 2.1e-144 516.2 368 70.9
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 2.1e-144 516.2 371 69.8
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 2.8e-144 515.8 376 69.4
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 3.7e-144 515.4 383 68.1
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 1.4e-143 513.5 388 68.3
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 1.8e-143 513.1 317 79.2
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 1.8e-143 513.1 380 68.4
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 2.4e-143 512.7 304 78.6
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 2.4e-143 512.7 366 70.5
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 2.4e-143 512.7 373 67.8
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 3.1e-143 512.3 377 69.0
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 4.0e-143 511.9 378 68.8
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 6.9e-143 511.1 317 78.2
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 9.0e-143 510.8 383 68.4
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 9.0e-143 510.8 318 77.4
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 9.0e-143 510.8 373 69.4
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 2.0e-142 509.6 372 68.0
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 2.6e-142 509.2 305 80.3
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 4.5e-142 508.4 357 69.7
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 5.8e-142 508.1 373 70.5
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 7.6e-142 507.7 376 68.1
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 7.6e-142 507.7 386 66.3
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 3.8e-141 505.4 359 70.5
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 4.9e-141 505.0 305 79.3
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 6.4e-141 504.6 372 69.6
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 6.4e-141 504.6 315 78.4
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 1.1e-140 503.8 368 70.1
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 1.9e-140 503.1 296 80.1
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 1.9e-140 503.1 296 80.1
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 2.5e-140 502.7 381 68.5
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 4.2e-140 501.9 292 80.5
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 5.5e-140 501.5 303 76.6
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 5.5e-140 501.5 370 70.5
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 9.3e-140 500.7 292 80.5
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 9.3e-140 500.7 292 80.5
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 1.2e-139 500.4 292 80.5
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 1.6e-139 500.0 292 80.5
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 1.6e-139 500.0 368 68.8
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 1.6e-139 500.0 297 78.8
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 2.1e-139 499.6 292 80.5
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 3.5e-139 498.8 310 76.5
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 1.0e-138 497.3 294 81.6
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 1.3e-138 496.9 292 80.1
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 2.3e-138 496.1 292 79.1
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 3.0e-138 495.7 427 61.4
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 3.0e-138 495.7 292 79.1
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 1.9e-137 493.0 384 66.7
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 2.5e-137 492.7 291 79.7
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 7.4e-137 491.1 319 73.7
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 1.3e-136 490.3 305 76.4
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 1.6e-136 490.0 373 64.9
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 2.1e-136 489.6 300 77.7
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 6.2e-136 488.0 362 66.6
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 6.9e-135 484.6 344 71.2
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 1.2e-134 483.8 384 63.3
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 1.7e-133 479.9 298 76.5
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 5.1e-130 468.4 286 77.6
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 4.3e-129 465.3 369 64.0
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 2.8e-128 462.6 343 67.6
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 2.0e-126 456.4 296 74.0
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 4.6e-123 445.3 297 69.4
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 8.8e-122 441.0 338 65.7
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 8.2e-120 434.5 306 66.7
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 1.8e-119 433.3 293 67.9
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 2.0e-118 429.9 353 59.8
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 2.6e-118 429.5 293 68.6
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 4.5e-118 428.7 291 66.7
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.3e-117 427.2 332 60.8
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 3.2e-116 422.5 229 88.2
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 5.5e-116 421.8 267 82.4
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 1.7e-109 400.2 427 54.1
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 1.2e-94 350.9 292 59.9
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 3.8e-93 345.9 182 87.9
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 3.2e-92 342.8 313 59.7
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 4.7e-83 312.4 215 67.9
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 8.0e-83 311.6 275 62.5
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 1.8e-82 310.5 263 63.5
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 4.0e-82 309.3 213 72.3
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 9.5e-76 288.1 270 57.8
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 1.3e-72 277.7 294 52.7
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 1.1e-47 194.9 242 50.0
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 2.5e-23 114.0 149 50.3
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 3.2e-23 113.6 157 49.0
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 1.0e-21 108.6 94 58.5
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 2.9e-16 90.5 63 68.3
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 3.4e-09 67.0 36 75.0
Oeu018839.1 Olea europaea HOM05D006606 ORTHO05D289568 1.6e-06 58.2 72 45.8


User provided reference genes

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