Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006304g0010 Nicotiana tabacum HOM05D000594 ORTHO05D003009 6.4e-58 227.3 119 100.0
Nitab4.5_0000552g0030 Nicotiana tabacum HOM05D000594 ORTHO05D003009 4.5e-27 124.8 193 44.0
Peaxi162Scf01086g00028 Petunia axillaris HOM05D000594 ORTHO05D003009 2.2e-21 105.9 202 39.1
CAN.G162.141 Capsicum annuum HOM05D000594 ORTHO05D003009 2.8e-21 105.5 195 37.9
PGSC0003DMG400019231 Solanum tuberosum HOM05D000594 ORTHO05D003009 2.6e-19 99.0 204 37.3
Sopen07g032110 Solanum pennellii HOM05D000594 ORTHO05D003009 7.7e-19 97.4 201 36.8
Solyc07g063970.3 Solanum lycopersicum HOM05D000594 ORTHO05D003009 3.8e-18 95.1 201 36.3
Medtr4g081420 Medicago truncatula HOM05D000594 ORTHO05D003009 1.3e-13 80.1 52 71.2
Glyma.12G215700 Glycine max HOM05D000594 ORTHO05D003009 3.7e-13 78.6 48 75.0
CiPaw.12G125500 Carya illinoinensis HOM05D000594 ORTHO05D003009 6.3e-13 77.8 37 94.6
COL.COLO4_09551 Corchorus olitorius HOM05D000594 ORTHO05D003009 6.3e-13 77.8 37 94.6
Duzib213G0363 Durio zibethinus HOM05D000594 ORTHO05D003009 6.3e-13 77.8 37 94.6
Glyma.06G265800 Glycine max HOM05D000594 ORTHO05D003009 6.3e-13 77.8 40 85.0
Glyma.12G136900 Glycine max HOM05D000594 ORTHO05D003009 6.3e-13 77.8 40 85.0
Gohir.D01G060000 Gossypium hirsutum HOM05D000594 ORTHO05D003009 6.3e-13 77.8 37 94.6
Gorai.002G081400 Gossypium raimondii HOM05D000594 ORTHO05D003009 6.3e-13 77.8 37 94.6
Thecc.07G055900 Theobroma cacao HOM05D000594 ORTHO05D003009 6.3e-13 77.8 37 94.6
CSS0045235 Camellia sinensis var. sinensis HOM05D000594 ORTHO05D003009 1.4e-12 76.6 42 78.6
Glyma.13G285800 Glycine max HOM05D000594 ORTHO05D003009 1.4e-12 76.6 51 68.6
Oeu007647.1 Olea europaea HOM05D000594 ORTHO05D003009 1.4e-12 76.6 44 81.8
MSTRG.15172 Avicennia marina HOM05D000594 ORTHO05D003009 1.8e-12 76.3 44 81.8
Ciclev10008310m.g Citrus clementina HOM05D000594 ORTHO05D003009 1.8e-12 76.3 37 91.9
Gohir.A01G073400 Gossypium hirsutum HOM05D000594 ORTHO05D003009 1.8e-12 76.3 37 91.9
Phvul.011G142000 Phaseolus vulgaris HOM05D000594 ORTHO05D003009 2.4e-12 75.9 40 82.5
Psat7g161080 Pisum sativum HOM05D000594 ORTHO05D003009 2.4e-12 75.9 38 86.8
VMungo1127G1280 Vigna mungo HOM05D000594 ORTHO05D003009 2.4e-12 75.9 40 82.5
CiPaw.11G182400 Carya illinoinensis HOM05D000594 ORTHO05D003009 4.1e-12 75.1 37 89.2
Duzib170G0990 Durio zibethinus HOM05D000594 ORTHO05D003009 4.1e-12 75.1 37 91.9
FvH4_3g21630 Fragaria vesca HOM05D000594 ORTHO05D003009 4.1e-12 75.1 48 72.9
FAN11G3372 Fragaria x ananassa HOM05D000594 ORTHO05D003009 4.1e-12 75.1 48 72.9
FAN16G2939 Fragaria x ananassa HOM05D000594 ORTHO05D003009 4.1e-12 75.1 48 72.9
FAN21G2737 Fragaria x ananassa HOM05D000594 ORTHO05D003009 4.1e-12 75.1 48 72.9
FAN25G1561 Fragaria x ananassa HOM05D000594 ORTHO05D003009 4.1e-12 75.1 48 72.9
QL08p014022 Quercus lobata HOM05D000594 ORTHO05D003009 4.1e-12 75.1 37 89.2
Ca_18840_v3 Cicer arietinum L. HOM05D000594 ORTHO05D003009 5.3e-12 74.7 38 84.2
Cc05_g13120 Coffea canephora HOM05D000594 ORTHO05D003009 6.9e-12 74.3 43 76.7
Cpa.g.sc97.89 Carica papaya HOM05D000594 ORTHO05D003009 9.1e-12 73.9 37 89.2
RcHm_v2.0_Chr5g0037081 Rosa chinensis HOM05D000594 ORTHO05D003009 9.1e-12 73.9 48 70.8
SGA_v2.0_scaffold70G23538 Striga asiatica HOM05D000594 ORTHO05D003009 9.1e-12 73.9 45 77.8
Lsat_1_v5_gn_9_95041 Lactuca sativa HOM05D000594 ORTHO05D003009 1.2e-11 73.6 37 86.5
Cfa020457 Carpinus fangiana HOM05D000594 ORTHO05D003009 1.5e-11 73.2 37 86.5
Haze_09587 Corylus avellana HOM05D000594 ORTHO05D003009 1.5e-11 73.2 37 86.5
Eucgr.F03418 Eucalyptus grandis HOM05D000594 ORTHO05D003009 1.5e-11 73.2 37 83.8
SalBow8G5076 Salvia bowleyana HOM05D000594 ORTHO05D003009 1.5e-11 73.2 47 80.9
TPR.G34065 Trifolium pratense HOM05D000594 ORTHO05D003009 1.5e-11 73.2 38 81.6
TWI39G0205 Tripterygium wilfordii HOM05D000594 ORTHO05D003009 1.5e-11 73.2 37 86.5
Actinidia12875 Actinidia chinensis HOM05D000594 ORTHO05D003009 2.0e-11 72.8 37 86.5
MSTRG.14407 Avicennia marina HOM05D000594 ORTHO05D003009 2.0e-11 72.8 46 80.4
Dinv03949 Davidia involucrata HOM05D000594 ORTHO05D003009 2.0e-11 72.8 37 86.5
TWI38G0631 Tripterygium wilfordii HOM05D000594 ORTHO05D003009 2.0e-11 72.8 37 89.2
Hma1.2p1_1054F.1_g252510 Hydrangea macrophylla HOM05D000594 ORTHO05D003009 2.6e-11 72.4 39 82.1
Hma1.2p1_3035F.1_g331933 Hydrangea macrophylla HOM05D000594 ORTHO05D003009 2.6e-11 72.4 39 82.1
Lj3g0006158 Lotus japonicus HOM05D000594 ORTHO05D003009 2.6e-11 72.4 37 83.8
Sp6g16590 Schrenkiella parvula HOM05D000594 ORTHO05D003009 2.6e-11 72.4 40 77.5
Lj8C165T6 Lonicera japonica HOM05D000594 ORTHO05D003009 3.4e-11 72.0 38 81.6
Manes.15G077900 Manihot esculenta HOM05D000594 ORTHO05D003009 3.4e-11 72.0 37 83.8
Migut.M01820 Erythranthe guttata HOM05D000594 ORTHO05D003009 4.5e-11 71.6 45 80.0
HanXRQChr03g0076251 Helianthus annuus HOM05D000594 ORTHO05D003009 4.5e-11 71.6 37 83.8
Hma1.2p1_1054F.1_g252520 Hydrangea macrophylla HOM05D000594 ORTHO05D003009 4.5e-11 71.6 37 83.8
Hma1.2p1_3035F.1_g331936 Hydrangea macrophylla HOM05D000594 ORTHO05D003009 4.5e-11 71.6 37 83.8
Sabra11G0118400 Salix brachista HOM05D000594 ORTHO05D003009 4.5e-11 71.6 37 86.5
Sabra16G0282200 Salix brachista HOM05D000594 ORTHO05D003009 4.5e-11 71.6 37 86.5
THA.LOC104799891 Tarenaya hassleriana HOM05D000594 ORTHO05D003009 4.5e-11 71.6 41 73.2
THA.LOC104799892 Tarenaya hassleriana HOM05D000594 ORTHO05D003009 4.5e-11 71.6 41 73.2
DCAR_010012 Daucus carota HOM05D000594 ORTHO05D003009 5.9e-11 71.2 37 86.5
MD03G1214000 Malus domestica HOM05D000594 ORTHO05D003009 5.9e-11 71.2 48 68.8
Prupe.4G200600 Prunus persica HOM05D000594 ORTHO05D003009 5.9e-11 71.2 38 81.6
CSS0040105 Camellia sinensis var. sinensis HOM05D000594 ORTHO05D003009 7.7e-11 70.9 37 81.1
MD11G1229000 Malus domestica HOM05D000594 ORTHO05D003009 7.7e-11 70.9 48 68.8
Potri.001G415600 Populus trichocarpa HOM05D000594 ORTHO05D003009 7.7e-11 70.9 37 83.8
ATR0109G015 Amborella trichopoda HOM05D000594 ORTHO05D003009 1.0e-10 70.5 37 81.1
Lj1A862T74 Lonicera japonica HOM05D000594 ORTHO05D003009 1.0e-10 70.5 37 83.8
Potri.011G131300 Populus trichocarpa HOM05D000594 ORTHO05D003009 1.0e-10 70.5 37 83.8
Rhsim06G0187900 Rhododendron simsii HOM05D000594 ORTHO05D003009 1.0e-10 70.5 37 83.8
vmacro11777 Vaccinium macrocarpon HOM05D000594 ORTHO05D003009 1.0e-10 70.5 37 83.8
Thhalv10013387m.g Eutrema salsugineum HOM05D000594 ORTHO05D003009 1.3e-10 70.1 40 75.0
Manes.03G121500 Manihot esculenta HOM05D000594 ORTHO05D003009 1.3e-10 70.1 37 81.1
GSVIVG01014576001 Vitis vinifera HOM05D000594 ORTHO05D003009 1.3e-10 70.1 37 81.1
Nn1g00040 Nelumbo nucifera HOM05D000594 ORTHO05D003009 1.7e-10 69.7 37 83.8
Nn1g06937 Nelumbo nucifera HOM05D000594 ORTHO05D003009 1.7e-10 69.7 37 83.8
DCAR_008681 Daucus carota HOM05D000594 ORTHO05D003009 2.9e-10 68.9 37 81.1
Lalb_Chr19g0134681 Lupinus albus HOM05D000594 ORTHO05D003009 2.9e-10 68.9 37 81.1
CsaV3_3G005810 Cucumis sativus L. HOM05D000594 ORTHO05D003009 3.8e-10 68.6 37 81.1
Dinv22318 Davidia involucrata HOM05D000594 ORTHO05D003009 3.8e-10 68.6 37 83.8
Nn1g03734 Nelumbo nucifera HOM05D000594 ORTHO05D003009 5.0e-10 68.2 37 81.1
Actinidia28658 Actinidia chinensis HOM05D000594 ORTHO05D003009 6.5e-10 67.8 37 81.1
TAR629G0326 Trochodendron aralioides HOM05D000594 ORTHO05D003009 6.5e-10 67.8 37 81.1
BcaC03g14299 Brassica carinata HOM05D000594 ORTHO05D003009 8.5e-10 67.4 41 70.7
C02p16830 Brassica napus HOM05D000594 ORTHO05D003009 8.5e-10 67.4 41 70.7
BolC2t07785H Brassica oleracea HOM05D000594 ORTHO05D003009 8.5e-10 67.4 41 70.7
ECA240G0222 Erigeron canadensis HOM05D000594 ORTHO05D003009 8.5e-10 67.4 36 77.8
MELO3C016581.2 Cucumis melo HOM05D000594 ORTHO05D003009 1.1e-09 67.0 37 78.4
Lj3g0021031 Lotus japonicus HOM05D000594 ORTHO05D003009 1.1e-09 67.0 48 62.5
ClCG10G006310 Citrullus lanatus HOM05D000594 ORTHO05D003009 2.5e-09 65.9 37 75.7
HanXRQChr05g0159281 Helianthus annuus HOM05D000594 ORTHO05D003009 2.5e-09 65.9 41 70.7
BcaB05g22151 Brassica carinata HOM05D000594 ORTHO05D003009 3.2e-09 65.5 41 68.3
A02p10130 Brassica napus HOM05D000594 ORTHO05D003009 3.2e-09 65.5 41 68.3
BraA02t06084Z Brassica rapa HOM05D000594 ORTHO05D003009 3.2e-09 65.5 41 68.3
GSVIVG01004470001 Vitis vinifera HOM05D000594 ORTHO05D003009 3.2e-09 65.5 37 78.4
PSO541G5378 Papaver somniferum HOM05D000594 ORTHO05D003009 4.2e-09 65.1 37 75.7
Thhalv10025260m.g Eutrema salsugineum HOM05D000594 ORTHO05D003009 7.2e-09 64.3 40 62.5
PGR031G2281 Punica granatum HOM05D000594 ORTHO05D003009 7.2e-09 64.3 48 60.4
Sed0017155 Sechium edule HOM05D000594 ORTHO05D003009 7.2e-09 64.3 37 70.3
Aqoxy1G03826 Aquilegia oxysepala HOM05D000594 ORTHO05D003009 9.4e-09 63.9 37 73.0
AL8G30080 Arabidopsis lyrata HOM05D000594 ORTHO05D003009 9.4e-09 63.9 41 78.0
vmacro03738 Vaccinium macrocarpon HOM05D000594 ORTHO05D003009 9.4e-09 63.9 49 65.3
AT5G54630 Arabidopsis thaliana HOM05D000594 ORTHO05D003009 1.2e-08 63.5 44 68.2
arahy.Tifrunner.gnm1.ann1.5FCQ1J Arachis hypogaea HOM05D000594 ORTHO05D003009 1.2e-08 63.5 49 65.3
arahy.Tifrunner.gnm1.ann1.B4LZ3P Arachis hypogaea HOM05D000594 ORTHO05D003009 1.2e-08 63.5 49 65.3
CARHR267940 Cardamine hirsuta HOM05D000594 ORTHO05D003009 1.2e-08 63.5 40 72.5
Rhsim13G0162500 Rhododendron simsii HOM05D000594 ORTHO05D003009 1.2e-08 63.5 40 70.0
C09p44980 Brassica napus HOM05D000594 ORTHO05D003009 2.1e-08 62.8 41 68.3
PSO675G8123 Papaver somniferum HOM05D000594 ORTHO05D003009 2.1e-08 62.8 37 73.0
HanXRQChr13g0407591 Helianthus annuus HOM05D000594 ORTHO05D003009 2.7e-08 62.4 38 73.7
SalBow7G0916 Salvia bowleyana HOM05D000594 ORTHO05D003009 3.6e-08 62.0 44 63.6
CARHR234880 Cardamine hirsuta HOM05D000594 ORTHO05D003009 4.7e-08 61.6 43 60.5
Aa31LG5G10220 Aethionema arabicum HOM05D000594 ORTHO05D003009 6.1e-08 61.2 41 65.9
CSS0010564 Camellia sinensis var. sinensis HOM05D000594 ORTHO05D003009 6.1e-08 61.2 37 70.3
Manes.16G016500 Manihot esculenta HOM05D000594 ORTHO05D003009 6.1e-08 61.2 37 70.3
Oeu050807.1 Olea europaea HOM05D000594 ORTHO05D003009 6.1e-08 61.2 48 62.5
Oeu050808.1 Olea europaea HOM05D000594 ORTHO05D003009 6.1e-08 61.2 48 62.5
Ah.06g183140 Amaranthus hybridus HOM05D000594 ORTHO05D003009 1.0e-07 60.5 52 53.8
BcaC04g20320 Brassica carinata HOM05D000594 ORTHO05D003009 1.0e-07 60.5 41 65.9
BolC9t57375H Brassica oleracea HOM05D000594 ORTHO05D003009 1.0e-07 60.5 41 65.9
CDE12G0254 Ceratophyllum demersum HOM05D000594 ORTHO05D003009 1.4e-07 60.1 44 63.6
Dinv17852 Davidia involucrata HOM05D000594 ORTHO05D003009 1.4e-07 60.1 37 73.0
Lalb_Chr22g0357151 Lupinus albus HOM05D000594 ORTHO05D003009 1.4e-07 60.1 38 68.4
Sp7g25160 Schrenkiella parvula HOM05D000594 ORTHO05D003009 1.4e-07 60.1 42 61.9
SGA_v2.0_scaffold9G05016 Striga asiatica HOM05D000594 ORTHO05D003009 1.4e-07 60.1 40 67.5
Carub.0008s1489 Capsella rubella HOM05D000594 ORTHO05D003009 1.8e-07 59.7 30 80.0
ECA246G2346 Erigeron canadensis HOM05D000594 ORTHO05D003009 1.8e-07 59.7 73 47.9
MELO3C018138.2 Cucumis melo HOM05D000594 ORTHO05D003009 2.3e-07 59.3 37 67.6
CsaV3_3G022770 Cucumis sativus L. HOM05D000594 ORTHO05D003009 2.3e-07 59.3 37 67.6
CDE01G0393 Ceratophyllum demersum HOM05D000594 ORTHO05D003009 3.0e-07 58.9 40 62.5
ClCG05G014890 Citrullus lanatus HOM05D000594 ORTHO05D003009 3.0e-07 58.9 37 67.6
Lsat_1_v5_gn_5_4521 Lactuca sativa HOM05D000594 ORTHO05D003009 3.0e-07 58.9 37 70.3
Sed0001219 Sechium edule HOM05D000594 ORTHO05D003009 3.0e-07 58.9 37 67.6
Aqoxy4G01921 Aquilegia oxysepala HOM05D000594 ORTHO05D003009 3.9e-07 58.5 41 65.9
MSTRG.12949 Avicennia marina HOM05D000594 ORTHO05D003009 3.9e-07 58.5 47 63.8
Cc00_g13620 Coffea canephora HOM05D000594 ORTHO05D003009 3.9e-07 58.5 42 66.7
SEGI_41402 Sequoiadendron giganteum HOM05D000594 ORTHO05D003009 3.9e-07 58.5 42 61.9
AUR62034222 Chenopodium quinoa HOM05D000594 ORTHO05D003009 5.1e-07 58.2 48 56.2
BcaC09g50595 Brassica carinata HOM05D000594 ORTHO05D003009 6.7e-07 57.8 36 61.1
C01p23380 Brassica napus HOM05D000594 ORTHO05D003009 6.7e-07 57.8 36 61.1
BolC1t02279H Brassica oleracea HOM05D000594 ORTHO05D003009 6.7e-07 57.8 36 61.1
Hund23323 Selenicereus undatus HOM05D000594 ORTHO05D003009 6.7e-07 57.8 46 58.7
CDE05G3458 Ceratophyllum demersum HOM05D000594 ORTHO05D003009 8.8e-07 57.4 37 64.9
AT4G27240 Arabidopsis thaliana HOM05D000594 ORTHO05D003009 1.1e-06 57.0 41 58.5
Lj1A1221T59 Lonicera japonica HOM05D000594 ORTHO05D003009 1.1e-06 57.0 38 73.7
CDE11G0516 Ceratophyllum demersum HOM05D000594 ORTHO05D003009 1.5e-06 56.6 37 64.9
Aa31LG3G10560 Aethionema arabicum HOM05D000594 ORTHO05D003009 2.0e-06 56.2 58 48.3
EL10Ac4g07993 Beta vulgaris HOM05D000594 ORTHO05D003009 2.0e-06 56.2 32 71.9
BcaNung03051 Brassica carinata HOM05D000594 ORTHO05D003009 2.0e-06 56.2 42 57.1
CSS0046197 Camellia sinensis var. sinensis HOM05D000594 ORTHO05D003009 2.0e-06 56.2 39 66.7
CSS0048644 Camellia sinensis var. sinensis HOM05D000594 ORTHO05D003009 2.0e-06 56.2 39 66.7
HPP92_012334 Vanilla planifolia HOM05D000594 ORTHO05D003009 2.0e-06 56.2 41 56.1
Actinidia05543 Actinidia chinensis HOM05D000594 ORTHO05D003009 2.6e-06 55.8 38 68.4
A01p18440 Brassica napus HOM05D000594 ORTHO05D003009 2.6e-06 55.8 36 58.3
BraA01t01792Z Brassica rapa HOM05D000594 ORTHO05D003009 2.6e-06 55.8 36 58.3
HPP92_012378 Vanilla planifolia HOM05D000594 ORTHO05D003009 2.6e-06 55.8 41 56.1
Carub.0007s1363 Capsella rubella HOM05D000594 ORTHO05D003009 3.3e-06 55.5 41 53.7
Nitab4.5_0002345g0110 Nicotiana tabacum HOM05D000594 ORTHO05D003009 7.4e-06 54.3 38 71.1
Oeu016147.1 Olea europaea HOM05D000594 ORTHO05D003009 7.4e-06 54.3 48 56.2
Migut.M01260 Erythranthe guttata HOM05D000594 ORTHO05D003009 9.7e-06 53.9 53 50.9


User provided reference genes

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