Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006159g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.2e-183 646.4 318 100.0
Peaxi162Scf00016g00054 Petunia axillaris HOM05D009034 ORTHO05D009362 9.4e-48 194.9 291 44.3
Nitab4.5_0009524g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.7e-44 184.1 280 43.2
Sopen01g052330 Solanum pennellii HOM05D009034 ORTHO05D009362 2.2e-44 183.7 305 39.3
Nitab4.5_0011228g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 8.3e-44 181.8 285 46.3
Nitab4.5_0009524g0020 Nicotiana tabacum HOM05D009034 ORTHO05D009362 3.1e-43 179.9 273 42.5
PGSC0003DMG400036424 Solanum tuberosum HOM05D009034 ORTHO05D009362 4.1e-43 179.5 302 38.4
Sopen01g051920 Solanum pennellii HOM05D009034 ORTHO05D009362 2.5e-40 170.2 305 38.0
CAN.G696.2 Capsicum annuum HOM05D009034 ORTHO05D009362 2.7e-39 166.8 291 41.6
CAN.G958.3 Capsicum annuum HOM05D009034 ORTHO05D009362 4.7e-39 166.0 290 41.7
PGSC0003DMG400044125 Solanum tuberosum HOM05D009034 ORTHO05D009362 8.8e-38 161.8 279 39.1
Peaxi162Scf00263g00093 Petunia axillaris HOM05D009034 ORTHO05D009362 1.5e-37 161.0 216 46.8
Peaxi162Scf00016g00626 Petunia axillaris HOM05D009034 ORTHO05D009362 1.7e-36 157.5 334 35.6
Nitab4.5_0003526g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.4e-35 154.5 288 39.2
Nitab4.5_0009799g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 3.1e-35 153.3 251 42.2
Peaxi162Scf01164g00412 Petunia axillaris HOM05D009034 ORTHO05D009362 9.1e-35 151.8 319 37.9
PGSC0003DMG400044507 Solanum tuberosum HOM05D009034 ORTHO05D009362 4.2e-32 142.9 294 35.0
Nitab4.5_0010389g0020 Nicotiana tabacum HOM05D009034 ORTHO05D009362 7.2e-32 142.1 193 44.6
CAN.G1058.2 Capsicum annuum HOM05D009034 ORTHO05D009362 4.0e-30 136.3 277 33.9
Solyc01g109730.1 Solanum lycopersicum HOM05D009034 ORTHO05D009362 2.4e-27 127.1 205 40.0
Nitab4.5_0003603g0160 Nicotiana tabacum HOM05D009034 ORTHO05D009362 3.3e-24 116.7 189 40.2
PGSC0003DMG400036040 Solanum tuberosum HOM05D009034 ORTHO05D009362 6.1e-23 112.5 197 40.6
Nitab4.5_0000783g0030 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.4e-22 111.3 164 42.7
Nitab4.5_0000308g0340 Nicotiana tabacum HOM05D009034 ORTHO05D009362 3.4e-21 106.7 149 44.3
Sopen03g020740 Solanum pennellii HOM05D000004 ORTHO05D009362 4.1e-19 99.8 166 36.1
PGSC0003DMG400024922 Solanum tuberosum HOM05D000257 ORTHO05D004041 1.2e-18 98.2 161 37.3
Nitab4.5_0004390g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.1e-15 87.4 164 38.4
Dinv18943 Davidia involucrata HOM05D008179 ORTHO05D009362 5.2e-14 82.8 281 27.4
Nitab4.5_0009972g0050 Nicotiana tabacum HOM05D009034 ORTHO05D009362 5.8e-13 79.3 72 56.9
Prupe.4G130300 Prunus persica HOM05D008179 ORTHO05D009362 2.9e-12 77.0 281 27.4
Lj1C1222G5 Lonicera japonica HOM05D008179 ORTHO05D009362 4.9e-12 76.3 282 26.6
RcHm_v2.0_Chr5g0021181 Rosa chinensis HOM05D008179 ORTHO05D009362 6.4e-12 75.9 317 26.8
MD10G1212400 Malus domestica HOM05D008179 ORTHO05D009362 8.3e-12 75.5 278 24.8
QL93p0073_1249 Quercus lobata HOM05D008179 ORTHO05D009362 1.4e-11 74.7 292 24.0
Manes.04G017200 Manihot esculenta HOM05D008179 ORTHO05D009362 1.2e-10 71.6 288 25.0
Dinv18942 Davidia involucrata HOM05D008179 ORTHO05D009362 2.1e-10 70.9 181 29.8
Hma1.2p1_1682F.1_g297310 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 2.7e-10 70.5 289 28.0
Prupe.4G220100 Prunus persica HOM05D008179 ORTHO05D009362 4.6e-10 69.7 281 26.7
Manes.04G017300 Manihot esculenta HOM05D008179 ORTHO05D009362 6.0e-10 69.3 288 24.3
Prupe.4G130000 Prunus persica HOM05D008179 ORTHO05D009362 6.0e-10 69.3 281 27.8
Prupe.4G219900 Prunus persica HOM05D008179 ORTHO05D009362 1.0e-09 68.6 279 25.8
FAN14G5443 Fragaria x ananassa HOM05D008179 ORTHO05D009362 5.1e-09 66.2 288 25.0
FAN15G0940 Fragaria x ananassa HOM05D008179 ORTHO05D009362 1.5e-08 64.7 282 25.2
Prupe.4G112200 Prunus persica HOM05D008179 ORTHO05D009362 1.9e-08 64.3 278 24.5
Lj1C1222T5 Lonicera japonica HOM05D008179 ORTHO05D009362 2.5e-08 63.9 282 26.6
PGSC0003DMG402024921 Solanum tuberosum HOM05D009034 ORTHO05D009362 7.3e-08 62.4 74 40.5
Nitab4.5_0002662g0080 Nicotiana tabacum HOM05D009034 ORTHO05D009362 9.5e-08 62.0 108 40.7
Nitab4.5_0003526g0040 Nicotiana tabacum HOM05D009034 ORTHO05D009362 9.5e-08 62.0 75 49.3
Peaxi162Scf00016g00068 Petunia axillaris HOM05D009034 ORTHO05D009362 9.5e-08 62.0 52 59.6
Nitab4.5_0000283g0270 Nicotiana tabacum HOM05D009034 ORTHO05D009362 6.2e-07 59.3 61 47.5
Nitab4.5_0000283g0190 Nicotiana tabacum HOM05D009034 ORTHO05D009362 3.1e-06 57.0 49 55.1
Potri.017G058000 Populus trichocarpa HOM05D000007 ORTHO05D000017 8.9e-06 55.5 185 31.4


User provided reference genes

Program Settings