Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005154g0110 Nicotiana tabacum HOM05D009591 ORTHO05D000101 8.3e-105 383.6 185 100.0
Nitab4.5_0001041g0030 Nicotiana tabacum HOM05D009591 ORTHO05D000101 2.9e-33 146.0 121 65.3
PGSC0003DMG400041967 Solanum tuberosum HOM05D009591 ORTHO05D000101 8.5e-33 144.4 181 49.7
PGSC0003DMG400046934 Solanum tuberosum HOM05D009591 ORTHO05D000101 8.5e-33 144.4 155 53.5
PGSC0003DMG400025675 Solanum tuberosum HOM05D000171 ORTHO05D000101 1.8e-30 136.7 181 48.1
PGSC0003DMG400026777 Solanum tuberosum HOM05D009591 ORTHO05D000101 2.3e-30 136.3 171 49.7
CAN.G158.32 Capsicum annuum HOM05D000171 ORTHO05D000101 3.9e-30 135.6 147 55.1
PGSC0003DMG400047266 Solanum tuberosum HOM05D009591 ORTHO05D000101 2.8e-28 129.4 168 47.6
CAN.G158.31 Capsicum annuum HOM05D009591 ORTHO05D000101 5.5e-24 115.2 113 54.0
PGSC0003DMG400045426 Solanum tuberosum HOM05D000171 ORTHO05D000101 3.0e-22 109.4 184 41.8
Nitab4.5_0005154g0100 Nicotiana tabacum HOM05D009591 ORTHO05D000101 8.2e-20 101.3 178 41.6
CAN.G371.108 Capsicum annuum HOM05D009591 ORTHO05D000101 2.7e-18 96.3 158 41.1
PGSC0003DMG400036653 Solanum tuberosum HOM05D000171 ORTHO05D000101 3.5e-18 95.9 105 51.4
Peaxi162Scf01567g00009 Petunia axillaris HOM05D009591 ORTHO05D000101 1.7e-17 93.6 141 39.0
CAN.G1333.14 Capsicum annuum HOM05D022910 ORTHO05D010076 5.0e-17 92.0 178 39.3
PGSC0003DMG400038445 Solanum tuberosum HOM05D000171 ORTHO05D000101 3.2e-16 89.4 178 37.6
PGSC0003DMG400017452 Solanum tuberosum HOM05D000312 ORTHO05D000221 7.2e-16 88.2 145 44.1
PGSC0003DMG400001445 Solanum tuberosum HOM05D000171 ORTHO05D000101 9.4e-16 87.8 174 38.5
CAN.G184.55 Capsicum annuum HOM05D009591 ORTHO05D000101 2.1e-15 86.7 180 37.8
PGSC0003DMG400047325 Solanum tuberosum HOM05D000171 ORTHO05D000101 4.7e-15 85.5 175 36.6
Sp1g34250 Schrenkiella parvula HOM05D000171 ORTHO05D000101 2.0e-13 80.1 173 33.5
PGSC0003DMG400043442 Solanum tuberosum HOM05D000171 ORTHO05D000101 2.0e-13 80.1 148 40.5
CARHR147780 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.7e-13 78.6 177 36.7
THA.LOC104799108 Tarenaya hassleriana HOM05D000171 ORTHO05D000101 7.5e-13 78.2 149 32.9
Peaxi162Scf00180g00130 Petunia axillaris HOM05D009591 ORTHO05D000101 2.8e-12 76.3 95 48.4
AT4G38870 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.7e-12 75.9 151 37.1
CARHR049440 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.7e-12 75.9 130 38.5
CARHR148260 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.3e-12 75.1 133 37.6
AL1G45480 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.1e-11 74.3 178 34.8
Nitab4.5_0000471g0110 Nicotiana tabacum HOM05D009591 ORTHO05D000101 1.4e-11 73.9 114 45.6
PGSC0003DMG400023178 Solanum tuberosum HOM05D009591 ORTHO05D000101 5.4e-11 72.0 92 53.3
THA.LOC104801504 Tarenaya hassleriana HOM05D000171 ORTHO05D000101 5.4e-11 72.0 151 34.4
Carub.0002s0113 Capsella rubella HOM05D000171 ORTHO05D000101 7.0e-11 71.6 171 32.7
CAN.G855.62 Capsicum annuum HOM05D009591 ORTHO05D000101 9.1e-11 71.2 118 39.0
AT2G13630 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.0e-10 70.1 146 32.9
A04p16950 Brassica napus HOM05D000171 ORTHO05D000101 2.0e-10 70.1 172 31.4
CAN.G206.206 Capsicum annuum HOM05D009591 ORTHO05D000101 2.0e-10 70.1 97 43.3
Thhalv10000202m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.7e-10 69.7 164 31.7
BraA04t17325Z Brassica rapa HOM05D000171 ORTHO05D000101 3.5e-10 69.3 175 31.4
AL1G53520 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.5e-10 68.9 146 37.0
BcaB01g04692 Brassica carinata HOM05D000171 ORTHO05D000101 7.7e-10 68.2 173 28.3
Carub.0001s2863 Capsella rubella HOM05D000171 ORTHO05D000101 1.0e-09 67.8 135 37.0
BcaC05g26731 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-09 67.4 140 31.4
CARHR201470 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.3e-09 67.4 178 29.8
Manes.11G003000 Manihot esculenta HOM05D000171 ORTHO05D000101 1.3e-09 67.4 167 29.3
Aa31LG11G10090 Aethionema arabicum HOM05D000171 ORTHO05D000101 1.7e-09 67.0 169 29.6
CARHR149520 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.7e-09 67.0 140 35.7
AT5G65850 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.3e-09 66.6 138 34.1
AT3G04660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.9e-09 66.2 142 31.7
AL1G62140 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.8e-09 65.9 197 31.0
BcaC03g14813 Brassica carinata HOM05D000171 ORTHO05D000101 3.8e-09 65.9 177 29.4
BolC2t08418H Brassica oleracea HOM05D000171 ORTHO05D000101 3.8e-09 65.9 177 29.4
Carub.0008s2334 Capsella rubella HOM05D000171 ORTHO05D000101 3.8e-09 65.9 164 30.5
BcaB02g08397 Brassica carinata HOM05D000171 ORTHO05D000101 5.0e-09 65.5 143 32.2
BcaC05g27918 Brassica carinata HOM05D000171 ORTHO05D000101 5.0e-09 65.5 167 32.3
C05p39240 Brassica napus HOM05D000171 ORTHO05D000101 5.0e-09 65.5 167 32.3
BolC5t32658H Brassica oleracea HOM05D000171 ORTHO05D000101 5.0e-09 65.5 167 32.3
THA.LOC104800494 Tarenaya hassleriana HOM05D000171 ORTHO05D000101 5.0e-09 65.5 173 32.4
BcaC02g08657 Brassica carinata HOM05D000171 ORTHO05D000101 6.5e-09 65.1 172 30.2
BcaC02g08658 Brassica carinata HOM05D000171 ORTHO05D000101 6.5e-09 65.1 172 30.2
A01p12880 Brassica napus HOM05D000171 ORTHO05D000101 6.5e-09 65.1 184 31.5
C02p22650 Brassica napus HOM05D000171 ORTHO05D000101 6.5e-09 65.1 177 29.4
BolC4t26742H Brassica oleracea HOM05D000171 ORTHO05D000101 6.5e-09 65.1 175 30.3
BraA01t01232Z Brassica rapa HOM05D000171 ORTHO05D000101 6.5e-09 65.1 184 31.5
C01p15520 Brassica napus HOM05D000171 ORTHO05D000101 8.6e-09 64.7 184 31.0
C05p02780 Brassica napus HOM05D000171 ORTHO05D000101 8.6e-09 64.7 154 32.5
BolC1t01504H Brassica oleracea HOM05D000171 ORTHO05D000101 8.6e-09 64.7 184 31.0
BolC5t29060H Brassica oleracea HOM05D000171 ORTHO05D000101 8.6e-09 64.7 154 32.5
Carub.0008s2318 Capsella rubella HOM05D000171 ORTHO05D000101 8.6e-09 64.7 100 33.0
CARHR041530 Cardamine hirsuta HOM05D000171 ORTHO05D000101 8.6e-09 64.7 170 31.8
Thhalv10009644m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.1e-08 64.3 164 31.1
AT1G47730 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.5e-08 63.9 151 29.1
PGSC0003DMG400035500 Solanum tuberosum HOM05D005465 ORTHO05D006612 1.5e-08 63.9 108 41.7
AT1G32420 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.9e-08 63.5 127 33.1
BraA05t20343Z Brassica rapa HOM05D000171 ORTHO05D000101 1.9e-08 63.5 152 30.3
Thhalv10009646m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.9e-08 63.5 168 32.7
AL1G45340 Arabidopsis lyrata HOM05D004820 ORTHO05D005946 2.5e-08 63.2 141 34.0
AL3G17170 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.5e-08 63.2 119 36.1
AL8G39540 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.5e-08 63.2 100 33.0
AL8G39590 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.5e-08 63.2 100 33.0
AT5G62510 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.2e-08 62.8 142 31.0
BcaC01g05368 Brassica carinata HOM05D000171 ORTHO05D000101 4.2e-08 62.4 183 29.5
BcaC02g08701 Brassica carinata HOM05D000171 ORTHO05D000101 4.2e-08 62.4 175 29.7
A03p10910 Brassica napus HOM05D000171 ORTHO05D000101 4.2e-08 62.4 173 26.6
BraA03t10401Z Brassica rapa HOM05D000171 ORTHO05D000101 4.2e-08 62.4 173 26.6
CARHR113190 Cardamine hirsuta HOM05D000171 ORTHO05D000101 4.2e-08 62.4 139 36.7
Thhalv10004411m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.2e-08 62.4 99 33.3
Aa31LG4G9200 Aethionema arabicum HOM05D000171 ORTHO05D000101 5.5e-08 62.0 157 32.5
CAN.G1800.2 Capsicum annuum HOM05D009591 ORTHO05D000101 5.5e-08 62.0 114 41.2
AL3G14700 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.5e-08 61.2 175 28.6
AL6G22600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.5e-08 61.2 179 27.4
A09p35110 Brassica napus HOM05D000171 ORTHO05D000101 9.5e-08 61.2 176 29.5
Carub.0001s2013 Capsella rubella HOM05D000171 ORTHO05D000101 9.5e-08 61.2 189 30.2
C03p27380 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-07 60.8 151 31.1
BolC3t15119H Brassica oleracea HOM05D000171 ORTHO05D000101 1.2e-07 60.8 151 31.1
Sp3g03500 Schrenkiella parvula HOM05D000171 ORTHO05D000101 1.2e-07 60.8 146 30.1
Sp5g04240 Schrenkiella parvula HOM05D000171 ORTHO05D000101 1.2e-07 60.8 133 34.6
AL4G11240 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.6e-07 60.5 168 31.0
Aa31LG6G10630 Aethionema arabicum HOM05D000171 ORTHO05D000101 2.8e-07 59.7 180 30.6
BcaB05g24243 Brassica carinata HOM05D000171 ORTHO05D000101 2.8e-07 59.7 176 28.4
CARHR030470 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.8e-07 59.7 132 34.1
Thhalv10015726m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.8e-07 59.7 181 26.0
CARHR144020 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.6e-07 59.3 147 32.7
CARHR276420 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.6e-07 59.3 164 26.8
PGSC0003DMG400041815 Solanum tuberosum HOM05D000171 ORTHO05D000101 3.6e-07 59.3 78 44.9
BolC4t26697H Brassica oleracea HOM05D000171 ORTHO05D000101 4.7e-07 58.9 143 31.5
CAN.G128.136 Capsicum annuum HOM05D000171 ORTHO05D000101 4.7e-07 58.9 88 38.6
Nitab4.5_0004010g0110 Nicotiana tabacum HOM05D009591 ORTHO05D000101 4.7e-07 58.9 72 48.6
AT5G62660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 6.1e-07 58.5 116 29.3
CARHR276410 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.1e-07 58.5 140 32.1
Thhalv10009543m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.1e-07 58.5 141 34.0
QL03p068470 Quercus lobata HOM05D009398 ORTHO05D011511 6.1e-07 58.5 126 35.7
Aa31LG1G6300 Aethionema arabicum HOM05D000171 ORTHO05D000101 8.0e-07 58.2 123 30.9
AL4G11220 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.0e-07 58.2 132 36.4
BolC1t05729H Brassica oleracea HOM05D000171 ORTHO05D000101 8.0e-07 58.2 169 29.0
Thhalv10019719m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.0e-07 58.2 134 33.6
BolC3t14489H Brassica oleracea HOM05D000171 ORTHO05D000101 1.0e-06 57.8 176 25.6
BcaB01g03501 Brassica carinata HOM05D000171 ORTHO05D000101 1.4e-06 57.4 149 30.2
BraA05t20785Z Brassica rapa HOM05D000171 ORTHO05D000101 1.4e-06 57.4 120 31.7
Carub.0001s3590 Capsella rubella HOM05D000171 ORTHO05D000101 1.4e-06 57.4 167 29.9
Dinv27418 Davidia involucrata HOM05D000171 ORTHO05D000101 1.4e-06 57.4 96 36.5
C06p06060 Brassica napus HOM05D000171 ORTHO05D000101 1.8e-06 57.0 170 30.6
C06p14150 Brassica napus HOM05D000171 ORTHO05D000101 1.8e-06 57.0 120 31.7
BolC2t07192H Brassica oleracea HOM05D000171 ORTHO05D000101 1.8e-06 57.0 191 27.7
BolC6t36593H Brassica oleracea HOM05D000171 ORTHO05D000101 1.8e-06 57.0 120 31.7
Carub.0001s2069 Capsella rubella HOM05D000171 ORTHO05D000101 1.8e-06 57.0 134 34.3
Duzib205G1409 Durio zibethinus HOM05D000171 ORTHO05D000101 1.8e-06 57.0 119 29.4
BNapus_Darmor_BZH_scaffold_38p00410 Brassica napus HOM05D000171 ORTHO05D000101 2.3e-06 56.6 180 28.3
A10p18200 Brassica napus HOM05D000171 ORTHO05D000101 3.0e-06 56.2 179 27.9
Carub.0008s2338 Capsella rubella HOM05D000171 ORTHO05D000101 3.0e-06 56.2 132 31.8
PGSC0003DMG400025676 Solanum tuberosum HOM05D000171 ORTHO05D000101 3.0e-06 56.2 64 51.6
BolC6t35719H Brassica oleracea HOM05D000171 ORTHO05D000101 4.0e-06 55.8 170 30.0
Thhalv10012258m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.0e-06 55.8 178 28.1
BcaC02g07930 Brassica carinata HOM05D000171 ORTHO05D000101 5.2e-06 55.5 157 28.0
BcaC02g07948 Brassica carinata HOM05D000171 ORTHO05D000101 5.2e-06 55.5 160 31.2
BolC4t27640H Brassica oleracea HOM05D000171 ORTHO05D000101 5.2e-06 55.5 160 31.2
BraA10t43895Z Brassica rapa HOM05D000171 ORTHO05D000101 5.2e-06 55.5 179 27.9
AL5G29232 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.8e-06 55.1 173 27.7
C04p61870 Brassica napus HOM05D000171 ORTHO05D000101 6.8e-06 55.1 157 26.1
C09p53810 Brassica napus HOM05D000171 ORTHO05D000101 6.8e-06 55.1 177 29.4
BraA02t05686Z Brassica rapa HOM05D000171 ORTHO05D000101 6.8e-06 55.1 180 28.3
BraA04t18004Z Brassica rapa HOM05D000171 ORTHO05D000101 8.8e-06 54.7 157 26.1
Nitab4.5_0000471g0070 Nicotiana tabacum HOM05D009591 ORTHO05D000101 8.8e-06 54.7 102 38.2


User provided reference genes

Program Settings