Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005125g0010 Nicotiana tabacum HOM05D003201 ORTHO05D008805 4.0e-96 354.8 177 100.0
Nitab4.5_0000075g0050 Nicotiana tabacum HOM05D003201 ORTHO05D008805 2.1e-60 236.1 155 80.0
Peaxi162Scf01181g00210 Petunia axillaris HOM05D003201 ORTHO05D008805 4.4e-55 218.4 136 80.1
Solyc01g057570.3 Solanum lycopersicum HOM05D003201 ORTHO05D008805 2.8e-49 199.1 154 68.8
Sopen01g022430 Solanum pennellii HOM05D003201 ORTHO05D008805 2.8e-49 199.1 154 68.8
CAN.G431.2 Capsicum annuum HOM05D003201 ORTHO05D008805 2.4e-48 196.1 136 75.0
Gorai.006G132500 Gossypium raimondii HOM05D003201 ORTHO05D008805 1.6e-41 173.3 139 66.2
Atru.chr2.209 Acer truncatum HOM05D003201 ORTHO05D008805 1.4e-40 170.2 142 62.7
Sopen01g019970 Solanum pennellii HOM05D003201 ORTHO05D008805 2.4e-40 169.5 154 62.3
Gohir.D09G114700 Gossypium hirsutum HOM05D003201 ORTHO05D008805 1.3e-38 163.7 136 65.4
Dinv15525 Davidia involucrata HOM05D003201 ORTHO05D008805 2.2e-38 162.9 136 63.2
Gohir.A09G117900 Gossypium hirsutum HOM05D003201 ORTHO05D008805 3.8e-38 162.2 136 64.7
Lalb_Chr01g0008671 Lupinus albus HOM05D003201 ORTHO05D008805 4.9e-38 161.8 134 62.7
GSVIVG01034815001 Vitis vinifera HOM05D003201 ORTHO05D008805 8.4e-38 161.0 131 65.6
Haze_24508 Corylus avellana HOM05D003201 ORTHO05D008805 1.1e-37 160.6 134 64.2
Ciclev10029320m.g Citrus clementina HOM05D003201 ORTHO05D008805 1.9e-37 159.8 133 63.9
CiPaw.03G255400 Carya illinoinensis HOM05D003201 ORTHO05D008805 2.4e-37 159.5 134 63.4
Cfa002302 Carpinus fangiana HOM05D003201 ORTHO05D008805 4.2e-37 158.7 134 63.4
SGA_v2.0_scaffold6G03334 Striga asiatica HOM05D003201 ORTHO05D008805 5.4e-37 158.3 150 57.3
Cc01_g05060 Coffea canephora HOM05D003201 ORTHO05D008805 7.1e-37 157.9 137 61.3
Glyma.16G207100 Glycine max HOM05D003201 ORTHO05D008805 3.5e-36 155.6 134 60.4
CSS0031904 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008805 6.0e-36 154.8 153 58.8
Thecc.05G124600 Theobroma cacao HOM05D003201 ORTHO05D008805 6.0e-36 154.8 136 61.8
MD11G1000200 Malus domestica HOM05D003201 ORTHO05D008805 7.9e-36 154.5 136 60.3
Lj2g0011105 Lotus japonicus HOM05D003201 ORTHO05D008805 1.0e-35 154.1 134 59.7
MSTRG.12815 Avicennia marina HOM05D003201 ORTHO05D008805 1.3e-35 153.7 137 58.4
Eucgr.J01718 Eucalyptus grandis HOM05D003201 ORTHO05D008805 1.3e-35 153.7 140 59.3
TAR623G0449 Trochodendron aralioides HOM05D003201 ORTHO05D008805 1.3e-35 153.7 136 61.0
Migut.N00525 Erythranthe guttata HOM05D003201 ORTHO05D008805 1.7e-35 153.3 136 59.6
Hma1.2p1_1133F.1_g260360 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 2.3e-35 152.9 133 60.9
Hma1.2p1_1133F.1_g260370 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 2.3e-35 152.9 133 60.9
vmacro04280 Vaccinium macrocarpon HOM05D003201 ORTHO05D008805 2.3e-35 152.9 136 59.6
Actinidia16221 Actinidia chinensis HOM05D003201 ORTHO05D008805 3.9e-35 152.1 134 60.4
Psat1g112800 Pisum sativum HOM05D003201 ORTHO05D008805 8.7e-35 151.0 135 60.7
SalBow3G4219 Salvia bowleyana HOM05D003201 ORTHO05D008805 8.7e-35 151.0 137 61.3
TPR.G5800 Trifolium pratense HOM05D003201 ORTHO05D008805 1.5e-34 150.2 135 60.7
ECA248G3933 Erigeron canadensis HOM05D003201 ORTHO05D008805 2.5e-34 149.4 140 57.9
PGR119G1272 Punica granatum HOM05D003201 ORTHO05D008805 3.3e-34 149.1 149 55.0
QL04p043008 Quercus lobata HOM05D003201 ORTHO05D008805 4.3e-34 148.7 134 61.9
DCAR_028397 Daucus carota HOM05D003201 ORTHO05D008805 7.3e-34 147.9 133 58.6
Medtr6g059320 Medicago truncatula HOM05D003201 ORTHO05D008805 7.3e-34 147.9 134 59.0
Prupe.6G000300 Prunus persica HOM05D003201 ORTHO05D008805 1.3e-33 147.1 136 58.1
Thhalv10026088m.g Eutrema salsugineum HOM05D003201 ORTHO05D008805 1.6e-33 146.7 131 59.5
TWI34G1882 Tripterygium wilfordii HOM05D003201 ORTHO05D008805 1.6e-33 146.7 136 58.1
HanXRQChr17g0555621 Helianthus annuus HOM05D003201 ORTHO05D008805 2.1e-33 146.4 134 60.4
Glyma.09G156400 Glycine max HOM05D003201 ORTHO05D008805 2.8e-33 146.0 134 57.5
Sabra13G0129200 Salix brachista HOM05D003201 ORTHO05D008805 4.8e-33 145.2 136 59.6
MBI13_g39202_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 8.1e-33 144.4 142 57.0
VMungo0464G1483 Vigna mungo HOM05D003201 ORTHO05D008805 8.1e-33 144.4 134 56.0
arahy.Tifrunner.gnm1.ann1.F1EX5J Arachis hypogaea HOM05D003201 ORTHO05D008805 1.1e-32 144.1 135 59.3
Phvul.004G131600 Phaseolus vulgaris HOM05D003201 ORTHO05D008805 1.1e-32 144.1 134 55.2
Manes.18G121700 Manihot esculenta HOM05D003201 ORTHO05D008805 1.4e-32 143.7 130 59.2
RcHm_v2.0_Chr5g0084171 Rosa chinensis HOM05D003201 ORTHO05D008805 1.4e-32 143.7 149 56.4
Sp7g18690 Schrenkiella parvula HOM05D003201 ORTHO05D008805 1.4e-32 143.7 131 58.0
FAN11G2508 Fragaria x ananassa HOM05D003201 ORTHO05D008805 2.4e-32 142.9 139 58.3
THA.LOC104806236 Tarenaya hassleriana HOM05D003201 ORTHO05D008805 3.1e-32 142.5 135 57.8
arahy.Tifrunner.gnm1.ann1.75P5EB Arachis hypogaea HOM05D003201 ORTHO05D008805 4.0e-32 142.1 139 57.6
BcaC09g51346 Brassica carinata HOM05D003201 ORTHO05D008805 5.3e-32 141.7 134 59.0
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 5.3e-32 141.7 134 59.0
Potri.013G161600 Populus trichocarpa HOM05D003201 ORTHO05D008805 5.3e-32 141.7 136 59.6
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 6.9e-32 141.4 134 58.2
Lsat_1_v5_gn_1_71340 Lactuca sativa HOM05D003201 ORTHO05D008805 6.9e-32 141.4 141 56.0
Cpa.g.sc30.50 Carica papaya HOM05D003201 ORTHO05D008805 9.0e-32 141.0 126 58.7
Sc18g0002730 Simmondsia chinensis HOM05D003201 ORTHO05D008805 9.0e-32 141.0 134 57.5
AT4G20350 Arabidopsis thaliana HOM05D003201 ORTHO05D008805 1.2e-31 140.6 131 60.3
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 1.2e-31 140.6 134 58.2
EL10Ac4g09260 Beta vulgaris HOM05D003201 ORTHO05D008805 1.5e-31 140.2 147 52.4
Aqoxy5G03624 Aquilegia oxysepala HOM05D003201 ORTHO05D008805 2.0e-31 139.8 137 54.7
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 2.6e-31 139.4 134 58.2
CANSAT35G1729 Cannabis sativa HOM05D003201 ORTHO05D008805 2.6e-31 139.4 134 56.7
MELO3C024592.2 Cucumis melo HOM05D003201 ORTHO05D008805 2.6e-31 139.4 136 56.6
FAN25G0659 Fragaria x ananassa HOM05D003201 ORTHO05D008805 5.8e-31 138.3 143 55.2
FvH4_3g46100 Fragaria vesca HOM05D003201 ORTHO05D008805 1.3e-30 137.1 136 56.6
CsaV3_6G041170 Cucumis sativus L. HOM05D003201 ORTHO05D008805 1.7e-30 136.7 134 56.0
MBI13_g36948_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 2.2e-30 136.3 136 57.4
PSO339G6265 Papaver somniferum HOM05D003201 ORTHO05D008805 2.2e-30 136.3 139 56.8
PSO384G0221 Papaver somniferum HOM05D003201 ORTHO05D008805 2.2e-30 136.3 139 56.8
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 8.4e-30 134.4 131 55.0
AL7G33540 Arabidopsis lyrata HOM05D003201 ORTHO05D008805 1.1e-29 134.0 131 58.8
PGSC0003DMG400026601 Solanum tuberosum HOM05D003201 ORTHO05D008805 1.9e-29 133.3 87 77.0
AUR62000916 Chenopodium quinoa HOM05D003201 ORTHO05D008805 1.2e-28 130.6 138 52.9
ClCG01G015060 Citrullus lanatus HOM05D003201 ORTHO05D008805 1.2e-28 130.6 137 55.5
Carub.0007s2082 Capsella rubella HOM05D003201 ORTHO05D008805 2.7e-28 129.4 132 56.8
CARHR227170 Cardamine hirsuta HOM05D003201 ORTHO05D008805 3.5e-28 129.0 135 55.6
AUR62005054 Chenopodium quinoa HOM05D003201 ORTHO05D008805 6.0e-28 128.3 134 53.7
Sed0008662 Sechium edule HOM05D003201 ORTHO05D008805 7.9e-28 127.9 152 48.7
CDE02G2127 Ceratophyllum demersum HOM05D003201 ORTHO05D008805 5.1e-27 125.2 141 48.9
Os10g0420000 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008805 5.1e-27 125.2 140 50.7
Zm00001eb047810 Zea mays HOM05D003201 ORTHO05D008805 8.7e-27 124.4 145 53.1
ATR0068G091 Amborella trichopoda HOM05D003201 ORTHO05D008805 3.3e-26 122.5 131 51.9
HPP92_021155 Vanilla planifolia HOM05D003201 ORTHO05D008805 7.4e-26 121.3 139 50.4
unitig_0.g1143 Utricularia gibba HOM05D003201 ORTHO05D008805 9.6e-26 120.9 131 52.7
Pp3c2_18510 Physcomitrium patens HOM05D003201 ORTHO05D008805 1.8e-24 116.7 135 47.4
SEGI_31075 Sequoiadendron giganteum HOM05D003201 ORTHO05D008805 1.8e-24 116.7 161 46.0
SMO132G0004 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 9.0e-24 114.4 148 45.3
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 3.4e-23 112.5 81 71.6
SMO147G0005 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 6.5e-22 108.2 146 43.2
Mapoly0007s0017 Marchantia polymorpha HOM05D003201 ORTHO05D008805 2.5e-21 106.3 142 40.8
AUR62004843 Chenopodium quinoa HOM05D003201 ORTHO05D008805 1.3e-19 100.5 77 61.0
Rhsim13G0235500 Rhododendron simsii HOM05D003201 ORTHO05D008805 9.6e-18 94.4 83 59.0
Ca_25246_v3 Cicer arietinum L. HOM05D003201 ORTHO05D008805 1.6e-17 93.6 93 57.0
Lj1A555G38 Lonicera japonica HOM05D003201 ORTHO05D008805 1.2e-15 87.4 91 56.0
COL.COLO4_24749 Corchorus olitorius HOM05D003201 ORTHO05D008805 2.0e-15 86.7 76 59.2
Hund07019 Selenicereus undatus HOM05D003201 ORTHO05D008805 2.6e-15 86.3 121 47.9
FAN21G2623 Fragaria x ananassa HOM05D003201 ORTHO05D008805 2.5e-13 79.7 86 52.3
MCO03G055 Micromonas commoda HOM05D003201 ORTHO05D008805 1.6e-12 77.0 135 36.3
Duzib093G2193 Durio zibethinus HOM05D003201 ORTHO05D008805 1.8e-11 73.6 75 56.0
Cre14.g632791 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008805 1.2e-07 60.8 51 54.9
CBR_g45550 Chara braunii HOM05D000019 ORTHO05D000353 3.8e-06 55.8 43 58.1


User provided reference genes

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