Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004940g0060 Nicotiana tabacum HOM05D006416 ORTHO05D008054 1.2e-161 573.2 298 100.0
Nitab4.5_0007238g0010 Nicotiana tabacum HOM05D006416 ORTHO05D008054 6.3e-155 550.8 298 96.3
Sopen01g042190 Solanum pennellii HOM05D006416 ORTHO05D008054 4.9e-139 498.0 298 89.9
CAN.G1134.18 Capsicum annuum HOM05D006416 ORTHO05D008054 1.1e-138 496.9 298 88.6
Solyc01g098640.3 Solanum lycopersicum HOM05D006416 ORTHO05D008054 1.2e-137 493.4 298 89.3
PGSC0003DMG402028574 Solanum tuberosum HOM05D006416 ORTHO05D008054 1.6e-137 493.0 298 89.3
Peaxi162Scf00434g00329 Petunia axillaris HOM05D006416 ORTHO05D008054 3.9e-136 488.4 299 85.6
Prupe.6G330400 Prunus persica HOM05D006416 ORTHO05D008054 5.1e-120 434.9 298 77.2
Actinidia23608 Actinidia chinensis HOM05D006416 ORTHO05D008054 8.6e-120 434.1 298 75.8
EL10Ac4g09303 Beta vulgaris HOM05D006416 ORTHO05D008054 1.5e-119 433.3 298 75.8
Rhsim07G0179600 Rhododendron simsii HOM05D006416 ORTHO05D008054 1.5e-119 433.3 298 76.8
Ah.06g190130 Amaranthus hybridus HOM05D006416 ORTHO05D008054 2.8e-118 429.1 298 74.8
Oeu032896.2 Olea europaea HOM05D006416 ORTHO05D008054 1.4e-117 426.8 298 75.8
QL03p004338 Quercus lobata HOM05D006416 ORTHO05D008054 1.4e-117 426.8 297 76.4
Oeu043843.1 Olea europaea HOM05D006416 ORTHO05D008054 3.1e-117 425.6 298 75.5
Gohir.A11G262900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 4.0e-117 425.2 298 75.2
CANSAT54G1414 Cannabis sativa HOM05D006416 ORTHO05D008054 6.8e-117 424.5 299 75.3
Nn1g02093 Nelumbo nucifera HOM05D006416 ORTHO05D008054 6.8e-117 424.5 304 75.0
Gohir.D11G272900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 2.6e-116 422.5 298 74.8
Lj9A681T37 Lonicera japonica HOM05D006416 ORTHO05D008054 2.6e-116 422.5 299 75.6
RcHm_v2.0_Chr3g0454061 Rosa chinensis HOM05D006416 ORTHO05D008054 2.6e-116 422.5 299 75.9
Gorai.007G294200 Gossypium raimondii HOM05D006416 ORTHO05D008054 3.4e-116 422.2 298 74.5
ClCG02G016070 Citrullus lanatus HOM05D006416 ORTHO05D008054 5.8e-116 421.4 298 73.2
Manes.09G163500 Manihot esculenta HOM05D006416 ORTHO05D008054 5.8e-116 421.4 298 75.5
Nn4g26146 Nelumbo nucifera HOM05D006416 ORTHO05D008054 5.8e-116 421.4 298 75.5
Cc02_g32670 Coffea canephora HOM05D006416 ORTHO05D008054 1.3e-115 420.2 301 75.7
Phvul.007G182400 Phaseolus vulgaris HOM05D006416 ORTHO05D008054 1.3e-115 420.2 298 75.5
Eucgr.H04456 Eucalyptus grandis HOM05D006416 ORTHO05D008054 2.2e-115 419.5 298 74.8
FAN02G3793 Fragaria x ananassa HOM05D006416 ORTHO05D008054 3.8e-115 418.7 299 73.9
CiPaw.08G166800 Carya illinoinensis HOM05D006416 ORTHO05D008054 6.4e-115 417.9 298 74.2
Thecc.05G308500 Theobroma cacao HOM05D006416 ORTHO05D008054 1.1e-114 417.2 298 73.5
COL.COLO4_13518 Corchorus olitorius HOM05D006416 ORTHO05D008054 1.4e-114 416.8 299 72.6
FAN05G2936 Fragaria x ananassa HOM05D006416 ORTHO05D008054 2.4e-114 416.0 299 73.6
FAN14G2526 Fragaria x ananassa HOM05D006416 ORTHO05D008054 3.2e-114 415.6 299 73.6
TAR362G1050 Trochodendron aralioides HOM05D006416 ORTHO05D008054 4.2e-114 415.2 298 72.5
MSTRG.2929 Avicennia marina HOM05D006416 ORTHO05D008054 5.4e-114 414.8 298 75.2
Duzib128G1696 Durio zibethinus HOM05D006416 ORTHO05D008054 5.4e-114 414.8 298 74.2
GSVIVG01000004001 Vitis vinifera HOM05D006416 ORTHO05D008054 5.4e-114 414.8 299 74.2
Cpa.g.sc48.9 Carica papaya HOM05D006416 ORTHO05D008054 9.3e-114 414.1 299 72.2
Ciclev10002001m.g Citrus clementina HOM05D006416 ORTHO05D008054 9.3e-114 414.1 301 72.8
MELO3C004307.2 Cucumis melo HOM05D006416 ORTHO05D008054 9.3e-114 414.1 298 72.8
FvH4_6g05320 Fragaria vesca HOM05D006416 ORTHO05D008054 9.3e-114 414.1 299 73.2
SGA_v2.0_scaffold204G41638 Striga asiatica HOM05D006416 ORTHO05D008054 9.3e-114 414.1 298 74.2
FAN05G0060 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.2e-113 413.7 299 73.2
FAN14G3791 Fragaria x ananassa HOM05D006416 ORTHO05D008054 2.7e-113 412.5 299 72.9
Duzib177G0710 Durio zibethinus HOM05D006416 ORTHO05D008054 4.6e-113 411.8 299 74.6
Migut.H00517 Erythranthe guttata HOM05D006416 ORTHO05D008054 4.6e-113 411.8 300 72.0
Glyma.10G157100 Glycine max HOM05D006416 ORTHO05D008054 6.0e-113 411.4 298 74.2
FAN09G2836 Fragaria x ananassa HOM05D006416 ORTHO05D008054 7.8e-113 411.0 299 72.9
arahy.Tifrunner.gnm1.ann1.ICF70N Arachis hypogaea HOM05D006416 ORTHO05D008054 1.0e-112 410.6 300 74.3
Potri.013G026400 Populus trichocarpa HOM05D006416 ORTHO05D008054 1.3e-112 410.2 298 72.8
Sabra05G0037800 Salix brachista HOM05D006416 ORTHO05D008054 1.3e-112 410.2 298 72.8
Glyma.20G231600 Glycine max HOM05D006416 ORTHO05D008054 1.7e-112 409.8 298 74.2
Cfa006543 Carpinus fangiana HOM05D006416 ORTHO05D008054 2.3e-112 409.5 303 73.6
Lsat_1_v5_gn_8_116020 Lactuca sativa HOM05D006416 ORTHO05D008054 2.3e-112 409.5 302 72.5
arahy.Tifrunner.gnm1.ann1.L7FLNG Arachis hypogaea HOM05D006416 ORTHO05D008054 3.0e-112 409.1 300 75.0
Ca_10088_v3 Cicer arietinum L. HOM05D006416 ORTHO05D008054 3.0e-112 409.1 298 70.5
PGR031G2709 Punica granatum HOM05D006416 ORTHO05D008054 3.0e-112 409.1 299 71.9
Haze_04238 Corylus avellana HOM05D006416 ORTHO05D008054 8.7e-112 407.5 300 74.0
MBI19_g27532_MAGBIO Magnolia biondii HOM05D006416 ORTHO05D008054 4.3e-111 405.2 298 73.2
Potri.005G038700 Populus trichocarpa HOM05D006416 ORTHO05D008054 4.3e-111 405.2 298 72.1
Lalb_Chr06g0167821 Lupinus albus HOM05D006416 ORTHO05D008054 7.3e-111 404.4 298 73.5
Aqoxy2G03216 Aquilegia oxysepala HOM05D006416 ORTHO05D008054 1.6e-110 403.3 299 71.9
MD12G1224000 Malus domestica HOM05D006416 ORTHO05D008054 2.1e-110 402.9 300 70.7
CDE08G0960 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 3.6e-110 402.1 300 72.0
Psat6g148880 Pisum sativum HOM05D006416 ORTHO05D008054 3.6e-110 402.1 298 71.1
Atru.chr2.491 Acer truncatum HOM05D006416 ORTHO05D008054 4.8e-110 401.7 303 71.9
Lj5g0006935 Lotus japonicus HOM05D006416 ORTHO05D008054 4.8e-110 401.7 299 71.6
CsaV3_2G004910 Cucumis sativus L. HOM05D006416 ORTHO05D008054 1.8e-109 399.8 312 67.9
MD04G1209400 Malus domestica HOM05D006416 ORTHO05D008054 2.4e-109 399.4 298 70.8
TWI12G1406 Tripterygium wilfordii HOM05D006416 ORTHO05D008054 3.1e-109 399.1 298 70.1
PSO407G0317 Papaver somniferum HOM05D006416 ORTHO05D008054 4.0e-109 398.7 299 71.2
THA.LOC104823736 Tarenaya hassleriana HOM05D006416 ORTHO05D008054 6.9e-109 397.9 303 71.0
CSS0022908 Camellia sinensis var. sinensis HOM05D006416 ORTHO05D008054 9.0e-109 397.5 295 73.2
TPR.G2722 Trifolium pratense HOM05D006416 ORTHO05D008054 2.0e-108 396.4 294 70.1
Medtr1g082420 Medicago truncatula HOM05D006416 ORTHO05D008054 4.4e-108 395.2 298 69.8
CDE02G0677 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 1.3e-107 393.7 300 70.3
Sc16g0008340 Simmondsia chinensis HOM05D006416 ORTHO05D008054 1.7e-107 393.3 298 71.8
Dinv22903 Davidia involucrata HOM05D006416 ORTHO05D008054 3.8e-107 392.1 228 84.6
Sed0000831 Sechium edule HOM05D006416 ORTHO05D008054 6.4e-107 391.3 299 70.2
PSO170G0754 Papaver somniferum HOM05D006416 ORTHO05D008054 1.4e-106 390.2 301 69.4
unitig_899.g15132 Utricularia gibba HOM05D000909 ORTHO05D000928 9.3e-106 387.5 264 75.4
ATR0626G312 Amborella trichopoda HOM05D006416 ORTHO05D008054 1.6e-105 386.7 303 70.6
SpUn0002_0460 Schrenkiella parvula HOM05D006416 ORTHO05D008054 1.6e-105 386.7 298 68.5
HanXRQChr15g0486581 Helianthus annuus HOM05D006416 ORTHO05D008054 3.5e-105 385.6 298 69.1
BcaB04g20144 Brassica carinata HOM05D006416 ORTHO05D008054 7.9e-105 384.4 298 68.8
AL1G65240 Arabidopsis lyrata HOM05D006416 ORTHO05D008054 1.0e-104 384.0 300 68.7
DCAR_029435 Daucus carota HOM05D006416 ORTHO05D008054 3.0e-104 382.5 245 80.4
Aa31LG2G11890 Aethionema arabicum HOM05D006416 ORTHO05D008054 6.6e-104 381.3 299 66.6
AT1G54780 Arabidopsis thaliana HOM05D006416 ORTHO05D008054 8.7e-104 380.9 300 69.0
A01p27150 Brassica napus HOM05D006416 ORTHO05D008054 1.1e-103 380.6 299 67.6
BraA01t02850Z Brassica rapa HOM05D006416 ORTHO05D008054 1.1e-103 380.6 299 67.6
BcaC09g49606 Brassica carinata HOM05D006416 ORTHO05D008054 1.9e-103 379.8 299 67.6
C01p34560 Brassica napus HOM05D006416 ORTHO05D008054 1.9e-103 379.8 299 67.6
BolC1t03427H Brassica oleracea HOM05D006416 ORTHO05D008054 1.9e-103 379.8 299 67.6
CARHR055910 Cardamine hirsuta HOM05D006416 ORTHO05D008054 1.9e-103 379.8 298 68.5
HanXRQChr09g0258731 Helianthus annuus HOM05D006416 ORTHO05D008054 2.5e-103 379.4 301 69.8
Carub.0002s0864 Capsella rubella HOM05D006416 ORTHO05D008054 4.3e-103 378.6 300 67.7
ECA232G3707 Erigeron canadensis HOM05D006416 ORTHO05D008054 1.6e-102 376.7 235 80.0
Thhalv10023632m.g Eutrema salsugineum HOM05D006416 ORTHO05D008054 2.8e-102 375.9 303 67.0
HPP92_006953 Vanilla planifolia HOM05D006416 ORTHO05D008054 2.8e-102 375.9 299 67.2
SalBow1G1453 Salvia bowleyana HOM05D006416 ORTHO05D008054 3.1e-101 372.5 283 70.3
Zm00001eb346800 Zea mays HOM05D006416 ORTHO05D008054 2.1e-94 349.7 302 64.6
Os05g0401100 Oryza sativa ssp. japonica HOM05D006416 ORTHO05D008054 8.1e-94 347.8 234 76.1
Pp3c11_19220 Physcomitrium patens HOM05D006416 ORTHO05D008054 2.0e-92 343.2 275 66.5
Migut.C00218 Erythranthe guttata HOM05D006416 ORTHO05D008054 2.6e-92 342.8 205 82.9
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.6e-92 341.3 230 75.7
Pp3c7_6980 Physcomitrium patens HOM05D006416 ORTHO05D008054 2.2e-91 339.7 275 65.8
SEGI_37406 Sequoiadendron giganteum HOM05D006416 ORTHO05D008054 2.3e-88 329.7 234 71.8
Hma1.2p1_0666F.1_g199430 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 1.9e-87 326.6 222 73.4
SMO329G0005 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 6.5e-83 311.6 236 67.8
Mapoly0079s0006 Marchantia polymorpha HOM05D006416 ORTHO05D008054 2.5e-82 309.7 250 64.4
SMO353G0282 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 1.4e-74 283.9 203 68.5
CBR_g30711 Chara braunii HOM05D006416 ORTHO05D008054 2.7e-73 279.6 231 60.6
Lalb_Chr02g0148391 Lupinus albus HOM05D006416 ORTHO05D008054 1.2e-65 254.2 215 67.4
Aa31LG1G5580 Aethionema arabicum HOM05D006416 ORTHO05D008054 1.7e-59 233.8 137 81.0
Hma1.2p1_0666F.1_g199440 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 2.6e-55 219.9 140 74.3
MCO01G659 Micromonas commoda HOM05D006416 ORTHO05D008054 1.2e-49 201.1 208 48.1
Cre03.g182150 Chlamydomonas reinhardtii HOM05D006416 ORTHO05D008054 2.1e-49 200.3 229 44.1
PRCOL_00003436 Prasinoderma coloniale HOM05D006416 ORTHO05D008054 8.8e-40 168.3 227 39.2
Dinv23978 Davidia involucrata HOM05D006416 ORTHO05D008054 1.0e-35 154.8 89 87.6
Lalb_Chr02g0148401 Lupinus albus HOM05D006416 ORTHO05D008054 1.1e-34 151.4 83 90.4
arahy.Tifrunner.gnm1.ann1.SGB0EA Arachis hypogaea HOM05D006416 ORTHO05D008054 4.7e-33 146.0 86 81.4
Haze_01725 Corylus avellana HOM05D006416 ORTHO05D008054 2.0e-23 114.0 64 82.8
AUR62000865 Chenopodium quinoa HOM05D006416 ORTHO05D008054 5.1e-11 72.8 87 51.7


User provided reference genes

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