Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004918g0010 Nicotiana tabacum HOM05D004479 ORTHO05D005597 2.0e-293 1011.9 585 100.0
Nitab4.5_0002664g0040 Nicotiana tabacum HOM05D004479 ORTHO05D005597 6.4e-252 874.0 547 93.2
Solyc03g123960.3 Solanum lycopersicum HOM05D004479 ORTHO05D005597 1.8e-246 855.9 533 91.9
Sopen03g041690 Solanum pennellii HOM05D004479 ORTHO05D005597 1.3e-241 839.7 569 86.3
CAN.G790.12 Capsicum annuum HOM05D004479 ORTHO05D005597 5.3e-230 801.2 518 89.6
Peaxi162Scf00038g02656 Petunia axillaris HOM05D004479 ORTHO05D005597 1.5e-208 729.9 529 77.3
Nitab4.5_0005664g0060 Nicotiana tabacum HOM05D004479 ORTHO05D005597 5.0e-204 714.9 510 77.6
Dinv09182 Davidia involucrata HOM05D004479 ORTHO05D005597 4.8e-199 698.4 552 76.4
Cc04_g00200 Coffea canephora HOM05D004479 ORTHO05D005597 4.0e-193 678.7 543 75.9
Actinidia21882 Actinidia chinensis HOM05D004479 ORTHO05D005597 5.0e-188 661.8 574 70.4
MSTRG.10879 Avicennia marina HOM05D004479 ORTHO05D005597 1.4e-182 643.7 559 70.5
Migut.I01194 Erythranthe guttata HOM05D004479 ORTHO05D005597 1.2e-178 630.6 556 70.9
CSS0019442 Camellia sinensis var. sinensis HOM05D004479 ORTHO05D005597 1.3e-172 610.5 567 70.2
TAR626G0959 Trochodendron aralioides HOM05D004479 ORTHO05D005597 3.8e-172 609.0 577 69.5
HanXRQChr12g0359691 Helianthus annuus HOM05D004479 ORTHO05D005597 6.6e-172 608.2 542 69.6
Hma1.2p1_1111F.1_g258400 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 2.1e-170 603.2 452 79.6
Ciclev10025265m.g Citrus clementina HOM05D004479 ORTHO05D005597 3.0e-169 599.4 578 66.3
Oeu049641.1 Olea europaea HOM05D004479 ORTHO05D005597 2.2e-167 593.2 583 63.6
Nn7g37005 Nelumbo nucifera HOM05D004479 ORTHO05D005597 1.4e-166 590.5 571 68.1
GSVIVG01029540001 Vitis vinifera HOM05D004479 ORTHO05D005597 4.1e-166 589.0 570 67.0
Prupe.1G049400 Prunus persica HOM05D004479 ORTHO05D005597 9.2e-166 587.8 575 67.1
Lsat_1_v5_gn_5_137281 Lactuca sativa HOM05D004479 ORTHO05D005597 2.3e-164 583.2 512 72.7
ECA234G3188 Erigeron canadensis HOM05D001810 ORTHO05D005662 6.6e-164 581.6 500 70.0
Potri.010G253100 Populus trichocarpa HOM05D004479 ORTHO05D005597 6.6e-164 581.6 551 67.7
Gohir.A01G221776 Gossypium hirsutum HOM05D004479 ORTHO05D005597 1.9e-163 580.1 564 67.2
QL05p084035 Quercus lobata HOM05D004479 ORTHO05D005597 9.5e-163 577.8 566 66.1
Medtr5g013930 Medicago truncatula HOM05D004479 ORTHO05D005597 1.2e-162 577.4 554 67.5
Glyma.12G188300 Glycine max HOM05D004479 ORTHO05D005597 3.1e-161 572.8 531 66.7
Manes.06G177300 Manihot esculenta HOM05D004479 ORTHO05D005597 5.8e-160 568.5 564 65.6
Gorai.010G142700 Gossypium raimondii HOM05D004479 ORTHO05D005597 7.5e-160 568.2 563 67.0
CANSAT78G0411 Cannabis sativa HOM05D004479 ORTHO05D005597 4.9e-159 565.5 548 67.3
CsaV3_3G030520 Cucumis sativus L. HOM05D004479 ORTHO05D005597 7.0e-158 561.6 561 62.6
Duzib192G0061 Durio zibethinus HOM05D004479 ORTHO05D005597 7.0e-158 561.6 527 68.1
TPR.G5557 Trifolium pratense HOM05D004479 ORTHO05D005597 1.2e-157 560.8 546 65.9
MELO3C026710.2 Cucumis melo HOM05D004479 ORTHO05D005597 1.0e-156 557.8 557 64.1
PGSC0003DMG400009164 Solanum tuberosum HOM05D004479 ORTHO05D005597 1.0e-156 557.8 353 91.5
MD16G1227300 Malus domestica HOM05D004479 ORTHO05D005597 6.6e-156 555.1 573 62.8
PGR119G2289 Punica granatum HOM05D004479 ORTHO05D005597 6.6e-156 555.1 560 65.7
COL.COLO4_31168 Corchorus olitorius HOM05D004479 ORTHO05D005597 9.5e-155 551.2 523 68.6
Ca_21726_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 3.6e-154 549.3 539 66.2
vmacro18747 Vaccinium macrocarpon HOM05D004479 ORTHO05D005597 3.6e-154 549.3 600 58.2
Rhsim08G0249800 Rhododendron simsii HOM05D004479 ORTHO05D005597 6.2e-154 548.5 542 66.4
VMungo1080G0276 Vigna mungo HOM05D004479 ORTHO05D005597 1.4e-153 547.4 529 68.1
RcHm_v2.0_Chr4g0395701 Rosa chinensis HOM05D004479 ORTHO05D005597 5.8e-152 542.0 568 65.0
ClCG07G014640 Citrullus lanatus HOM05D004479 ORTHO05D005597 9.9e-152 541.2 538 62.6
Thecc.06G058800 Theobroma cacao HOM05D004479 ORTHO05D005597 1.7e-151 540.4 555 64.7
arahy.Tifrunner.gnm1.ann1.HYUF3S Arachis hypogaea HOM05D004479 ORTHO05D005597 2.2e-151 540.0 527 67.7
arahy.Tifrunner.gnm1.ann1.SFLF9H Arachis hypogaea HOM05D004479 ORTHO05D005597 6.4e-151 538.5 527 67.6
Sabra10G0196900 Salix brachista HOM05D004479 ORTHO05D005597 4.1e-150 535.8 661 53.7
EL10Ac7g18162 Beta vulgaris HOM05D004479 ORTHO05D005597 7.8e-149 531.6 512 65.2
Phvul.005G185100 Phaseolus vulgaris HOM05D004479 ORTHO05D005597 7.8e-149 531.6 530 66.6
Eucgr.J03177 Eucalyptus grandis HOM05D004479 ORTHO05D005597 1.0e-148 531.2 569 61.3
unitig_748.g8028 Utricularia gibba HOM05D004479 ORTHO05D005597 1.3e-148 530.8 570 58.9
Ah.15g094320 Amaranthus hybridus HOM05D004479 ORTHO05D005597 1.6e-146 523.9 545 63.3
Aqoxy7G02788 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 3.6e-146 522.7 562 62.6
FvH4_4g04880 Fragaria vesca HOM05D004479 ORTHO05D005597 8.1e-146 521.5 569 62.7
Gohir.A06G118600 Gossypium hirsutum HOM05D004479 ORTHO05D005597 8.1e-146 521.5 558 63.1
SalBow6G0079 Salvia bowleyana HOM05D004479 ORTHO05D005597 1.8e-145 520.4 545 57.6
Atru.chr1.2695 Acer truncatum HOM05D004479 ORTHO05D005597 4.0e-145 519.2 556 61.2
TWI09G1491 Tripterygium wilfordii HOM05D004479 ORTHO05D005597 2.6e-144 516.5 493 64.9
Hund18609 Selenicereus undatus HOM05D004479 ORTHO05D005597 6.4e-143 511.9 557 58.0
FAN17G0751 Fragaria x ananassa HOM05D004479 ORTHO05D005597 5.4e-142 508.8 580 58.4
Sed0022371 Sechium edule HOM05D004479 ORTHO05D005597 5.4e-142 508.8 534 62.0
THA.LOC104800314 Tarenaya hassleriana HOM05D004479 ORTHO05D005597 7.8e-141 505.0 575 57.6
FAN22G0181 Fragaria x ananassa HOM05D004479 ORTHO05D005597 5.1e-140 502.3 530 63.8
Lj3g0018425 Lotus japonicus HOM05D004479 ORTHO05D005597 3.1e-137 493.0 500 66.0
Sc12g0011150 Simmondsia chinensis HOM05D004479 ORTHO05D005597 6.9e-137 491.9 535 61.1
PSO170G2367 Papaver somniferum HOM05D004479 ORTHO05D005597 1.3e-135 487.6 567 60.8
MBI13_g34036_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 1.7e-135 487.3 504 63.5
Sp2g14070 Schrenkiella parvula HOM05D004479 ORTHO05D005597 1.4e-134 484.2 554 59.4
Cfa002151 Carpinus fangiana HOM05D004479 ORTHO05D005597 2.7e-133 479.9 489 64.2
Hund18598 Selenicereus undatus HOM05D004479 ORTHO05D005597 2.7e-133 479.9 462 64.1
Lj6C65T2 Lonicera japonica HOM05D004479 ORTHO05D005597 4.6e-133 479.2 393 74.8
Zm00001eb320420 Zea mays HOM05D004479 ORTHO05D005597 7.8e-133 478.4 548 54.9
Aa31LG2G7330 Aethionema arabicum HOM05D004479 ORTHO05D005597 5.6e-131 472.2 531 57.8
AUR62001343 Chenopodium quinoa HOM05D004479 ORTHO05D005597 7.3e-131 471.9 555 54.8
PSO384G0383 Papaver somniferum HOM05D004479 ORTHO05D005597 9.6e-131 471.5 573 60.0
MBI13_g01743_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 1.1e-129 468.0 505 61.6
SGA_v2.0_scaffold122G33268 Striga asiatica HOM05D004479 ORTHO05D005597 1.4e-129 467.6 549 58.7
RcHm_v2.0_Chr4g0395721 Rosa chinensis HOM05D004479 ORTHO05D005597 2.4e-129 466.8 491 65.0
Psat5g288040 Pisum sativum HOM05D004479 ORTHO05D005597 1.5e-128 464.2 444 68.2
PSO063G0217 Papaver somniferum HOM05D004479 ORTHO05D005597 3.8e-127 459.5 572 58.7
HPP92_008247 Vanilla planifolia HOM05D004479 ORTHO05D005597 1.9e-126 457.2 568 53.7
ATR0626G211 Amborella trichopoda HOM05D004479 ORTHO05D005597 1.8e-124 450.7 535 54.0
Glyma.13G372700 Glycine max HOM05D004479 ORTHO05D005597 2.3e-124 450.3 437 67.5
CARHR213680 Cardamine hirsuta HOM05D004479 ORTHO05D005597 5.6e-123 445.7 564 56.9
AT2G03070 Arabidopsis thaliana HOM05D004479 ORTHO05D005597 6.2e-122 442.2 554 56.9
CDE02G4004 Ceratophyllum demersum HOM05D004479 ORTHO05D005597 3.1e-121 439.9 548 53.1
DCAR_030619 Daucus carota HOM05D004479 ORTHO05D005597 2.7e-117 426.8 368 67.4
Carub.0005s0192 Capsella rubella HOM05D004479 ORTHO05D005597 5.1e-116 422.5 552 55.3
Thhalv10004003m.g Eutrema salsugineum HOM05D004479 ORTHO05D005597 6.7e-116 422.2 532 58.6
Ca_04816_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 4.8e-114 416.0 542 56.3
A09p24080 Brassica napus HOM05D004479 ORTHO05D005597 2.4e-113 413.7 554 54.9
AUR62025661 Chenopodium quinoa HOM05D004479 ORTHO05D005597 3.1e-113 413.3 477 54.7
BcaC04g21507 Brassica carinata HOM05D004479 ORTHO05D005597 9.0e-113 411.8 555 53.5
BraA09t38008Z Brassica rapa HOM05D004479 ORTHO05D005597 2.0e-112 410.6 558 55.7
C09p30960 Brassica napus HOM05D004479 ORTHO05D005597 7.6e-112 408.7 555 53.3
BolC9t55955H Brassica oleracea HOM05D004479 ORTHO05D005597 7.6e-112 408.7 555 53.3
BcaB07g30687 Brassica carinata HOM05D004479 ORTHO05D005597 3.8e-111 406.4 507 58.6
AL5G12650 Arabidopsis lyrata HOM05D004479 ORTHO05D005597 3.2e-110 403.3 548 53.8
Gohir.D06G122500 Gossypium hirsutum HOM05D004479 ORTHO05D005597 1.6e-101 374.4 435 59.3
Dinv37783 Davidia involucrata HOM05D004479 ORTHO05D005597 6.1e-93 345.9 217 86.6
Dinv37782 Davidia involucrata HOM05D004479 ORTHO05D005597 5.3e-89 332.8 354 67.5
Os03g0423800 Oryza sativa ssp. japonica HOM05D004479 ORTHO05D005597 2.3e-84 317.4 238 71.4
Haze_16264 Corylus avellana HOM05D004479 ORTHO05D005597 2.8e-82 310.5 208 79.8
PSO836G0001 Papaver somniferum HOM05D004479 ORTHO05D005597 1.2e-80 305.1 479 53.0
Cpa.g.sc1515.2 Carica papaya HOM05D004479 ORTHO05D005597 5.2e-76 289.7 206 74.3
BraA06t27217Z Brassica rapa HOM05D004479 ORTHO05D005597 1.6e-64 251.5 235 59.1
BolC7t43874H Brassica oleracea HOM05D004479 ORTHO05D005597 1.5e-62 245.0 235 59.6
BcaC06g34021 Brassica carinata HOM05D004479 ORTHO05D005597 7.2e-62 242.7 235 59.1
BcaC06g31203 Brassica carinata HOM05D004479 ORTHO05D005597 1.2e-61 241.9 257 52.9
A06p43310 Brassica napus HOM05D004479 ORTHO05D005597 3.7e-58 230.3 266 51.5
Oeu062492.1 Olea europaea HOM05D004479 ORTHO05D005597 1.4e-57 228.4 232 57.3
Pp3c18_4030 Physcomitrium patens HOM05D004479 ORTHO05D005597 7.0e-57 226.1 294 46.9
Mapoly0029s0023 Marchantia polymorpha HOM05D004479 ORTHO05D005597 2.9e-55 220.7 317 46.1
Psat1g118080 Pisum sativum HOM05D004479 ORTHO05D005597 2.5e-46 191.0 173 62.4
C07p33640 Brassica napus HOM05D004479 ORTHO05D005597 1.8e-44 184.9 235 51.1
SMO114G0145 Selaginella moellendorffii HOM05D004479 ORTHO05D005597 1.9e-41 174.9 198 50.0
CBR_g41305 Chara braunii HOM05D004479 ORTHO05D005597 3.9e-39 167.2 214 45.3
AagrBONN_evm.TU.Sc2ySwM_117.2251 Anthoceros agrestis HOM05D004479 ORTHO05D005597 6.6e-39 166.4 290 41.0
AagrBONN_evm.TU.Sc2ySwM_117.1357 Anthoceros agrestis HOM05D004479 ORTHO05D005597 2.8e-37 161.0 228 43.9
Aqoxy377s002 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 2.3e-36 157.9 171 57.3
CiPaw.01G090700 Carya illinoinensis HOM05D004479 ORTHO05D005597 8.3e-34 149.4 147 61.9
Nitab4.5_0005739g0060 Nicotiana tabacum HOM05D004479 ORTHO05D029161 1.1e-30 139.0 94 78.7
CARHR145470 Cardamine hirsuta HOM05D004479 ORTHO05D005597 5.6e-30 136.7 105 69.5
SEGI_11469 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 1.5e-27 128.6 157 48.4
Psat0s1762g0040 Pisum sativum HOM05D004479 ORTHO05D005597 5.4e-25 120.2 194 43.8
COL.COLO4_31578 Corchorus olitorius HOM05D001810 ORTHO05D005662 1.6e-24 118.6 223 43.0
Actinidia21652 Actinidia chinensis HOM05D004479 ORTHO05D005597 7.8e-24 116.3 93 65.6
Psat0s1227g0080 Pisum sativum HOM05D000020 ORTHO05D015801 1.7e-23 115.2 138 54.3
Peaxi162Scf00038g02640 Petunia axillaris HOM05D004479 ORTHO05D029161 1.6e-21 108.6 59 88.1
QL03p033126 Quercus lobata HOM05D004479 ORTHO05D005597 6.2e-21 106.7 69 81.2
DCAR_030620 Daucus carota HOM05D004479 ORTHO05D005597 1.1e-20 105.9 99 60.6
SEGI_18721 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 6.9e-20 103.2 97 56.7
SHI42601 Sapria himalayana HOM05D004479 ORTHO05D005597 4.6e-16 90.5 152 40.1
SHI42840 Sapria himalayana HOM05D004479 ORTHO05D005597 4.6e-16 90.5 133 44.4
Cpa.g.sc155.18 Carica papaya HOM05D004479 ORTHO05D005597 1.5e-14 85.5 102 53.9
QL05p046913 Quercus lobata HOM05D004479 ORTHO05D005597 4.8e-13 80.5 113 49.6
SHI24407 Sapria himalayana HOM05D004479 ORTHO05D005597 1.5e-11 75.5 181 38.1
Hma1.2p1_0370F.1_g138010 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 2.0e-11 75.1 74 66.2
SHI42976 Sapria himalayana HOM05D004479 ORTHO05D005597 5.8e-11 73.6 116 43.1
SHI34972 Sapria himalayana HOM05D004479 ORTHO05D005597 9.9e-11 72.8 119 39.5
SHI31115 Sapria himalayana HOM05D004479 ORTHO05D005597 2.9e-10 71.2 44 77.3
SHI31116 Sapria himalayana HOM05D004479 ORTHO05D005597 2.9e-10 71.2 52 67.3
BcaC04g22058 Brassica carinata HOM05D006908 ORTHO05D008662 3.8e-10 70.9 39 87.2
C09p24010 Brassica napus HOM05D002960 ORTHO05D042139 3.8e-10 70.9 39 87.2
BolC9t55321H Brassica oleracea HOM05D002960 ORTHO05D042139 3.8e-10 70.9 39 87.2
COL.COLO4_18371 Corchorus olitorius HOM05D004479 ORTHO05D005597 6.4e-10 70.1 69 52.2
Psat7g008520 Pisum sativum HOM05D004479 ORTHO05D005597 1.1e-09 69.3 74 54.1
Haze_18674 Corylus avellana HOM05D004479 ORTHO05D005597 2.4e-09 68.2 39 84.6
SHI50578 Sapria himalayana HOM05D004479 ORTHO05D005597 4.2e-09 67.4 127 39.4
Psat0s2660g0040 Pisum sativum HOM05D000020 ORTHO05D015801 5.4e-09 67.0 87 49.4
SHI49595 Sapria himalayana HOM05D004479 ORTHO05D005597 7.1e-09 66.6 113 42.5
Psat3g045760 Pisum sativum HOM05D004392 ORTHO05D004846 3.5e-08 64.3 69 53.6
Lj5C22T9 Lonicera japonica HOM05D004479 ORTHO05D029161 3.0e-07 61.2 68 61.8
Psat3g175600 Pisum sativum HOM05D004479 ORTHO05D005597 3.0e-07 61.2 45 73.3
BcaC02g11491 Brassica carinata HOM05D019637 ORTHO05D018695 3.9e-07 60.8 40 82.5
C04p14790 Brassica napus HOM05D004479 ORTHO05D018695 3.9e-07 60.8 40 82.5
BolC4t23053H Brassica oleracea HOM05D004479 ORTHO05D018695 3.9e-07 60.8 40 82.5
FAN12G4029 Fragaria x ananassa HOM05D002474 ORTHO05D007142 3.9e-07 60.8 121 41.3
QL08p038027 Quercus lobata HOM05D004479 ORTHO05D337893 3.9e-07 60.8 41 78.0
SHI13126 Sapria himalayana HOM05D000105 ORTHO05D000023 1.5e-06 58.9 59 61.0
SHI35501 Sapria himalayana HOM05D004479 ORTHO05D005597 1.9e-06 58.5 103 38.8
SHI36675 Sapria himalayana HOM05D004479 ORTHO05D005597 1.9e-06 58.5 54 59.3
COL.COLO4_27264 Corchorus olitorius HOM05D004479 ORTHO05D005597 3.3e-06 57.8 59 49.2


User provided reference genes

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