Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004848g0120 Nicotiana tabacum HOM05D008135 ORTHO05D010260 4.9e-31 137.1 67 100.0
Nitab4.5_0006071g0080 Nicotiana tabacum HOM05D008135 ORTHO05D010260 5.4e-22 107.1 55 92.7
Solyc03g121340.1 Solanum lycopersicum HOM05D008135 ORTHO05D010260 6.7e-20 100.1 56 85.7
Peaxi162Scf00038g01219 Petunia axillaris HOM05D008135 ORTHO05D010260 1.1e-19 99.4 56 83.9
Sopen03g040150 Solanum pennellii HOM05D008135 ORTHO05D010260 3.3e-19 97.8 56 83.9
Dinv30405 Davidia involucrata HOM05D008135 ORTHO05D010260 2.0e-16 88.6 60 68.3
Actinidia32128 Actinidia chinensis HOM05D008135 ORTHO05D010260 1.7e-15 85.5 57 75.4
CSS0040576 Camellia sinensis var. sinensis HOM05D008135 ORTHO05D010260 1.1e-14 82.8 52 75.0
Oeu052813.1 Olea europaea HOM05D008135 ORTHO05D010260 3.2e-14 81.3 48 79.2
vmacro18825 Vaccinium macrocarpon HOM05D008135 ORTHO05D010260 5.5e-14 80.5 52 73.1
Rhsim08G0230800 Rhododendron simsii HOM05D008135 ORTHO05D010260 9.3e-14 79.7 48 77.1
Gohir.A05G133400 Gossypium hirsutum HOM05D008135 ORTHO05D010260 3.5e-13 77.8 54 64.8
Actinidia21739 Actinidia chinensis HOM05D008135 ORTHO05D010260 4.6e-13 77.4 53 73.6
Migut.I00998 Erythranthe guttata HOM05D008135 ORTHO05D010260 4.6e-13 77.4 43 83.7
Gohir.D05G135300 Gossypium hirsutum HOM05D008135 ORTHO05D010260 6.0e-13 77.0 54 64.8
Gorai.009G139100 Gossypium raimondii HOM05D008135 ORTHO05D010260 6.0e-13 77.0 54 64.8
Sabra01G0135100 Salix brachista HOM05D008135 ORTHO05D010260 7.9e-13 76.6 56 67.9
ECA232G1244 Erigeron canadensis HOM05D008135 ORTHO05D010260 1.8e-12 75.5 48 72.9
QL05p015599 Quercus lobata HOM05D008135 ORTHO05D010260 2.3e-12 75.1 54 66.7
MSTRG.11003 Avicennia marina HOM05D008135 ORTHO05D010260 3.0e-12 74.7 48 72.9
DCAR_007606 Daucus carota HOM05D008135 ORTHO05D010260 3.0e-12 74.7 58 60.3
Manes.04G137100 Manihot esculenta HOM05D008135 ORTHO05D010260 3.0e-12 74.7 55 67.3
Cfa003610 Carpinus fangiana HOM05D008135 ORTHO05D010260 1.9e-11 72.0 49 71.4
DCAR_026371 Daucus carota HOM05D008135 ORTHO05D010260 2.5e-11 71.6 50 62.0
QL05p015762 Quercus lobata HOM05D008135 ORTHO05D010260 2.5e-11 71.6 52 63.5
unitig_88.g27599 Utricularia gibba HOM05D008135 ORTHO05D010260 2.5e-11 71.6 56 58.9
Manes.11G029100 Manihot esculenta HOM05D008135 ORTHO05D010260 4.3e-11 70.9 54 66.7
CiPaw.01G227600 Carya illinoinensis HOM05D008135 ORTHO05D010260 9.6e-11 69.7 49 69.4
COL.COLO4_30598 Corchorus olitorius HOM05D008135 ORTHO05D010260 1.3e-10 69.3 51 64.7
Potri.001G194100 Populus trichocarpa HOM05D008135 ORTHO05D010260 1.6e-10 68.9 56 60.7
RcHm_v2.0_Chr2g0142321 Rosa chinensis HOM05D008135 ORTHO05D010260 1.6e-10 68.9 55 60.0
Duzib235G1506 Durio zibethinus HOM05D008135 ORTHO05D010260 2.1e-10 68.6 48 68.8
Prupe.3G053100 Prunus persica HOM05D008135 ORTHO05D010260 3.7e-10 67.8 53 64.2
Thecc.06G106900 Theobroma cacao HOM05D008135 ORTHO05D010260 4.8e-10 67.4 56 62.5
QL05p015735 Quercus lobata HOM05D008135 ORTHO05D010260 6.2e-10 67.0 50 64.0
Cpa.g.sc131.24 Carica papaya HOM05D008135 ORTHO05D010260 1.8e-09 65.5 53 56.6
Gohir.D10G064050 Gossypium hirsutum HOM05D008135 ORTHO05D010260 9.0e-09 63.2 52 59.6
Gohir.A10G062350 Gossypium hirsutum HOM05D008135 ORTHO05D010260 1.2e-08 62.8 52 57.7
TAR624G1313 Trochodendron aralioides HOM05D008135 ORTHO05D010260 1.2e-08 62.8 49 65.3
Glyma.07G012900 Glycine max HOM05D008135 ORTHO05D010260 3.4e-08 61.2 49 61.2
Gorai.011G068000 Gossypium raimondii HOM05D008135 ORTHO05D010260 3.4e-08 61.2 52 57.7
Glyma.08G196600 Glycine max HOM05D008135 ORTHO05D010260 5.8e-08 60.5 49 59.2
TAR383G0415 Trochodendron aralioides HOM05D008135 ORTHO05D010260 7.6e-08 60.1 52 55.8
arahy.Tifrunner.gnm1.ann1.4P5WGY Arachis hypogaea HOM05D008135 ORTHO05D010260 1.0e-07 59.7 50 64.0
Os01g0558700 Oryza sativa ssp. japonica HOM05D008135 ORTHO05D010260 1.3e-07 59.3 60 53.3
FAN05G3342 Fragaria x ananassa HOM05D008135 ORTHO05D010260 2.9e-07 58.2 55 54.5
Medtr8g015560 Medicago truncatula HOM05D008135 ORTHO05D010260 2.9e-07 58.2 53 58.5
FvH4_6g32890 Fragaria vesca HOM05D008135 ORTHO05D010260 3.8e-07 57.8 55 54.5
Phvul.010G142400 Phaseolus vulgaris HOM05D008135 ORTHO05D010260 3.8e-07 57.8 52 53.8
arahy.Tifrunner.gnm1.ann1.7STU2J Arachis hypogaea HOM05D008135 ORTHO05D010260 6.5e-07 57.0 50 62.0
Sc12g0009960 Simmondsia chinensis HOM05D008135 ORTHO05D010260 6.5e-07 57.0 62 48.4
Eucgr.J02889 Eucalyptus grandis HOM05D008135 ORTHO05D010260 8.4e-07 56.6 52 57.7
FAN02G1144 Fragaria x ananassa HOM05D008135 ORTHO05D010260 1.4e-06 55.8 55 52.7
ClCG09G000520 Citrullus lanatus HOM05D008135 ORTHO05D010260 7.1e-06 53.5 54 50.0
Psat4g194640 Pisum sativum HOM05D008135 ORTHO05D010260 7.1e-06 53.5 57 54.4
MBI01_g16574_MAGBIO Magnolia biondii HOM05D008135 ORTHO05D010260 9.3e-06 53.1 52 51.9


User provided reference genes

Program Settings