Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004743g0130 Nicotiana tabacum HOM05D004569 ORTHO05D005333 4.4e-118 427.9 213 100.0
Nitab4.5_0004412g0030 Nicotiana tabacum HOM05D004569 ORTHO05D005333 2.5e-73 279.3 164 90.9
Nitab4.5_0000321g0230 Nicotiana tabacum HOM05D004569 ORTHO05D005333 5.7e-73 278.1 167 89.8
Peaxi162Scf00192g01617 Petunia axillaris HOM05D004569 ORTHO05D005333 2.2e-56 223.0 143 82.5
Sopen11g003670 Solanum pennellii HOM05D004569 ORTHO05D005333 1.3e-48 197.2 160 68.8
CAN.G135.33 Capsicum annuum HOM05D004569 ORTHO05D005333 2.8e-48 196.1 145 75.2
Peaxi162Scf00904g00217 Petunia axillaris HOM05D004569 ORTHO05D005333 2.8e-48 196.1 142 75.4
PGSC0003DMG400027326 Solanum tuberosum HOM05D004569 ORTHO05D005333 8.8e-42 174.5 162 63.6
TAR365G0299 Trochodendron aralioides HOM05D004569 ORTHO05D005333 8.5e-37 157.9 144 61.8
Thecc.04G238000 Theobroma cacao HOM05D004569 ORTHO05D005333 1.1e-36 157.5 141 60.3
Dinv07545 Davidia involucrata HOM05D004569 ORTHO05D005333 5.5e-36 155.2 145 57.2
Duzib052G0452 Durio zibethinus HOM05D004569 ORTHO05D005333 2.1e-35 153.3 141 58.9
Gohir.A02G034100 Gossypium hirsutum HOM05D004569 ORTHO05D005333 6.1e-35 151.8 143 58.7
CiPaw.01G195800 Carya illinoinensis HOM05D004569 ORTHO05D005333 8.0e-35 151.4 147 59.2
Gohir.D02G040900 Gossypium hirsutum HOM05D004569 ORTHO05D005333 4.0e-34 149.1 143 58.0
Duzib052G0972 Durio zibethinus HOM05D004569 ORTHO05D005333 1.2e-33 147.5 141 57.4
Sc19g0003960 Simmondsia chinensis HOM05D004569 ORTHO05D005333 1.5e-33 147.1 150 57.3
Gorai.005G045300 Gossypium raimondii HOM05D004569 ORTHO05D005333 3.4e-33 146.0 139 57.6
Rhsim04G0197700 Rhododendron simsii HOM05D004569 ORTHO05D005333 7.5e-33 144.8 142 57.7
Rhsim01G0189100 Rhododendron simsii HOM05D004569 ORTHO05D005333 1.3e-32 144.1 144 56.2
CSS0011446 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 2.8e-32 142.9 145 56.6
Nn1g01867 Nelumbo nucifera HOM05D004569 ORTHO05D005333 2.8e-32 142.9 144 60.4
Ciclev10006087m.g Citrus clementina HOM05D004569 ORTHO05D005333 3.7e-32 142.5 151 58.3
CSS0021073 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 4.9e-32 142.1 139 57.6
CSS0049273 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 3.1e-31 139.4 142 56.3
Cc03_g04240 Coffea canephora HOM05D004569 ORTHO05D005333 4.1e-31 139.0 150 52.7
Potri.005G067600 Populus trichocarpa HOM05D004569 ORTHO05D005333 4.1e-31 139.0 139 59.0
Cfa006984 Carpinus fangiana HOM05D004569 ORTHO05D005333 1.6e-30 137.1 130 60.8
CANSAT78G0168 Cannabis sativa HOM05D004569 ORTHO05D005333 2.0e-30 136.7 152 52.6
GSVIVG01036653001 Vitis vinifera HOM05D004569 ORTHO05D005333 2.0e-30 136.7 116 65.5
Hund09493 Selenicereus undatus HOM05D004569 ORTHO05D005333 3.5e-30 136.0 151 54.3
PSO210G1425 Papaver somniferum HOM05D004569 ORTHO05D005333 4.5e-30 135.6 143 56.6
HanXRQChr06g0173001 Helianthus annuus HOM05D004569 ORTHO05D005333 7.7e-30 134.8 128 58.6
Haze_03750 Corylus avellana HOM05D004569 ORTHO05D005333 1.3e-29 134.0 132 58.3
CsaV3_2G013430 Cucumis sativus L. HOM05D004569 ORTHO05D005333 2.3e-29 133.3 151 54.3
ClCG06G006470 Citrullus lanatus HOM05D004569 ORTHO05D005333 2.9e-29 132.9 130 59.2
Phvul.001G230900 Phaseolus vulgaris HOM05D004569 ORTHO05D005333 2.9e-29 132.9 141 56.0
PSO832G4509 Papaver somniferum HOM05D004569 ORTHO05D005333 3.8e-29 132.5 132 57.6
Lj6g0017152 Lotus japonicus HOM05D004569 ORTHO05D005333 5.0e-29 132.1 149 53.0
ECA246G0155 Erigeron canadensis HOM05D004569 ORTHO05D005333 8.6e-29 131.3 130 53.1
VMungo1383G1439 Vigna mungo HOM05D004569 ORTHO05D005333 1.5e-28 130.6 146 55.5
TWI63G1720 Tripterygium wilfordii HOM05D004569 ORTHO05D005333 2.5e-28 129.8 143 52.4
Atru.chr4.2374 Acer truncatum HOM05D004569 ORTHO05D005333 3.3e-28 129.4 169 47.9
Aqoxy5G00407 Aquilegia oxysepala HOM05D004569 ORTHO05D005333 4.3e-28 129.0 133 56.4
Glyma.11G217000 Glycine max HOM05D004569 ORTHO05D005333 7.3e-28 128.3 141 55.3
Thhalv10005100m.g Eutrema salsugineum HOM05D004569 ORTHO05D005333 9.5e-28 127.9 138 53.6
Glyma.18G039600 Glycine max HOM05D004569 ORTHO05D005333 9.5e-28 127.9 141 56.0
vmacro17995 Vaccinium macrocarpon HOM05D004569 ORTHO05D005333 9.5e-28 127.9 142 50.7
Aa31LG11G680 Aethionema arabicum HOM05D004569 ORTHO05D005333 1.2e-27 127.5 145 54.5
arahy.Tifrunner.gnm1.ann1.NDW3GA Arachis hypogaea HOM05D004569 ORTHO05D005333 1.2e-27 127.5 139 54.7
AT5G62950 Arabidopsis thaliana HOM05D004569 ORTHO05D005333 2.1e-27 126.7 144 54.9
arahy.Tifrunner.gnm1.ann1.SFA2KC Arachis hypogaea HOM05D004569 ORTHO05D005333 2.1e-27 126.7 139 54.7
THA.LOC104827037 Tarenaya hassleriana HOM05D004569 ORTHO05D005333 2.8e-27 126.3 143 51.7
CARHR276760 Cardamine hirsuta HOM05D004569 ORTHO05D005333 3.6e-27 125.9 144 49.3
Lalb_Chr06g0161741 Lupinus albus HOM05D004569 ORTHO05D005333 3.6e-27 125.9 144 52.1
HanXRQChr05g0158611 Helianthus annuus HOM05D004569 ORTHO05D005333 4.7e-27 125.6 118 57.6
AL3G51140 Arabidopsis lyrata HOM05D004569 ORTHO05D005333 8.0e-27 124.8 120 57.5
Oeu042815.1 Olea europaea HOM05D004569 ORTHO05D005333 1.0e-26 124.4 142 52.8
Carub.0008s2366 Capsella rubella HOM05D004569 ORTHO05D005333 1.4e-26 124.0 140 53.6
MELO3C014285.2 Cucumis melo HOM05D004569 ORTHO05D005333 1.8e-26 123.6 162 50.0
Sed0021164 Sechium edule HOM05D004569 ORTHO05D005333 1.8e-26 123.6 137 53.3
AL8G39970 Arabidopsis lyrata HOM05D004569 ORTHO05D005333 4.0e-26 122.5 138 54.3
VMungo1383G2501 Vigna mungo HOM05D004569 ORTHO05D005333 4.0e-26 122.5 132 55.3
Manes.02G208200 Manihot esculenta HOM05D004569 ORTHO05D005333 6.8e-26 121.7 129 55.0
Carub.0004s0755 Capsella rubella HOM05D004569 ORTHO05D005333 1.2e-25 120.9 139 52.5
SGA_v2.0_scaffold45G17132 Striga asiatica HOM05D004044 ORTHO05D005333 1.2e-25 120.9 126 55.6
Oeu058961.1 Olea europaea HOM05D004569 ORTHO05D005333 1.5e-25 120.6 145 49.0
SalBow2G1663 Salvia bowleyana HOM05D004569 ORTHO05D005333 2.0e-25 120.2 140 51.4
Thhalv10000370m.g Eutrema salsugineum HOM05D004569 ORTHO05D005333 2.6e-25 119.8 144 52.1
Sp2g26090 Schrenkiella parvula HOM05D004569 ORTHO05D005333 5.7e-25 118.6 142 50.0
Migut.B00535 Erythranthe guttata HOM05D004569 ORTHO05D005333 1.3e-24 117.5 138 48.6
SGA_v2.0_scaffold353G49718 Striga asiatica HOM05D004569 ORTHO05D005333 1.3e-24 117.5 130 54.6
Lj5g0008299 Lotus japonicus HOM05D004569 ORTHO05D005333 2.2e-24 116.7 147 51.7
SalBow8G0974 Salvia bowleyana HOM05D004569 ORTHO05D005333 2.9e-24 116.3 136 50.7
Medtr7g034585 Medicago truncatula HOM05D004569 ORTHO05D005333 8.3e-24 114.8 139 50.4
AUR62028629 Chenopodium quinoa HOM05D004569 ORTHO05D005333 3.2e-23 112.8 137 51.1
Lsat_1_v5_gn_1_12980 Lactuca sativa HOM05D004569 ORTHO05D005333 3.2e-23 112.8 130 46.2
MD13G1198900 Malus domestica HOM05D004569 ORTHO05D005333 3.2e-23 112.8 137 46.0
Ca_17658_v3 Cicer arietinum L. HOM05D004569 ORTHO05D005333 5.4e-23 112.1 136 49.3
TPR.G14863 Trifolium pratense HOM05D004569 ORTHO05D005333 5.4e-23 112.1 146 46.6
PGR031G3247 Punica granatum HOM05D004569 ORTHO05D005333 9.2e-23 111.3 140 50.7
A09p07940 Brassica napus HOM05D004569 ORTHO05D005333 4.6e-22 109.0 145 46.9
PGR004G1818 Punica granatum HOM05D004569 ORTHO05D005333 1.3e-21 107.5 146 47.3
Atru.chr4.2398 Acer truncatum HOM05D004569 ORTHO05D005333 1.7e-21 107.1 94 61.7
Ah.02g110960 Amaranthus hybridus HOM05D000936 ORTHO05D001411 1.7e-21 107.1 132 48.5
Psat3g163880 Pisum sativum HOM05D004569 ORTHO05D005333 1.7e-21 107.1 155 45.2
BcaB07g29675 Brassica carinata HOM05D004569 ORTHO05D005333 2.3e-21 106.7 142 47.9
C02p62490 Brassica napus HOM05D004569 ORTHO05D005333 2.3e-21 106.7 147 48.3
BolC2t12308H Brassica oleracea HOM05D004569 ORTHO05D005333 2.3e-21 106.7 147 48.3
BraA09t36445Z Brassica rapa HOM05D004569 ORTHO05D005333 3.9e-21 105.9 144 46.5
MBI18_g09782_MAGBIO Magnolia biondii HOM05D004569 ORTHO05D005333 3.9e-21 105.9 139 48.2
BcaC03g18183 Brassica carinata HOM05D004569 ORTHO05D005333 5.0e-21 105.5 138 50.0
Dinv40544 Davidia involucrata HOM05D004569 ORTHO05D005333 6.6e-21 105.1 89 65.2
Prupe.1G020700 Prunus persica HOM05D004569 ORTHO05D005333 6.6e-21 105.1 147 44.2
A02p42590 Brassica napus HOM05D004569 ORTHO05D005333 8.6e-21 104.8 160 47.5
BraA02t09187Z Brassica rapa HOM05D004569 ORTHO05D005333 1.1e-20 104.4 143 49.7
CDE05G0131 Ceratophyllum demersum HOM05D004569 ORTHO05D005333 1.5e-20 104.0 132 47.0
Eucgr.H03416 Eucalyptus grandis HOM05D004569 ORTHO05D005333 1.5e-20 104.0 131 47.3
Sabra05G0055500 Salix brachista HOM05D004569 ORTHO05D005333 2.5e-20 103.2 89 62.9
Lsat_1_v5_gn_6_95400 Lactuca sativa HOM05D004569 ORTHO05D005333 4.3e-20 102.4 104 50.0
Zm00001eb076250 Zea mays HOM05D004569 ORTHO05D005333 4.3e-20 102.4 148 48.6
Zm00001eb076270 Zea mays HOM05D004569 ORTHO05D005333 4.3e-20 102.4 148 48.6
BcaB04g19957 Brassica carinata HOM05D004569 ORTHO05D005333 5.6e-20 102.1 143 48.3
BcaC04g23378 Brassica carinata HOM05D004569 ORTHO05D005333 5.6e-20 102.1 141 46.1
C09p08990 Brassica napus HOM05D004569 ORTHO05D005333 5.6e-20 102.1 141 46.8
BolC9t53811H Brassica oleracea HOM05D004569 ORTHO05D005333 5.6e-20 102.1 141 46.8
BcaC08g46303 Brassica carinata HOM05D004569 ORTHO05D005333 9.5e-20 101.3 145 49.7
BolC6t39293H Brassica oleracea HOM05D004569 ORTHO05D005333 1.6e-19 100.5 145 49.0
unitig_748.g7305 Utricularia gibba HOM05D004569 ORTHO05D005333 1.6e-19 100.5 137 47.4
C06p41320 Brassica napus HOM05D004569 ORTHO05D005333 2.8e-19 99.8 144 49.3
SalBow1G3047 Salvia bowleyana HOM05D004569 ORTHO05D005333 2.8e-19 99.8 94 58.5
Zm00001eb076290 Zea mays HOM05D004569 ORTHO05D005333 2.8e-19 99.8 132 50.0
Zm00001eb310390 Zea mays HOM05D004569 ORTHO05D005333 2.8e-19 99.8 132 50.0
CSS0028808 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 8.0e-19 98.2 144 43.1
Hma1.2p1_0602F.1_g187570 Hydrangea macrophylla HOM05D004569 ORTHO05D005333 1.4e-18 97.4 89 59.6
Solyc11g007810.3 Solanum lycopersicum HOM05D004569 ORTHO05D005333 1.4e-18 97.4 97 58.8
Aqoxy2G03457 Aquilegia oxysepala HOM05D004569 ORTHO05D005333 4.0e-18 95.9 83 61.4
COL.COLO4_21559 Corchorus olitorius HOM05D004569 ORTHO05D005333 5.2e-18 95.5 93 58.1
Medtr6g045613 Medicago truncatula HOM05D004569 ORTHO05D005333 1.2e-17 94.4 99 52.5
BcaC01g02544 Brassica carinata HOM05D004569 ORTHO05D005333 2.0e-17 93.6 136 46.3
C03p63650 Brassica napus HOM05D004569 ORTHO05D005333 2.0e-17 93.6 136 46.3
BolC3t18624H Brassica oleracea HOM05D004569 ORTHO05D005333 2.0e-17 93.6 136 46.3
TAR636G3114 Trochodendron aralioides HOM05D004569 ORTHO05D005333 9.8e-17 91.3 97 55.7
HPP92_022914 Vanilla planifolia HOM05D004569 ORTHO05D005333 1.3e-16 90.9 153 41.8
Psat3g162000 Pisum sativum HOM05D004569 ORTHO05D005333 1.7e-16 90.5 94 53.2
ATR0829G086 Amborella trichopoda HOM05D004569 ORTHO05D005333 4.9e-16 89.0 121 50.4
Dinv07599 Davidia involucrata HOM05D004569 ORTHO05D005333 6.4e-16 88.6 81 59.3
Os12g0488800 Oryza sativa ssp. japonica HOM05D004569 ORTHO05D005333 1.1e-15 87.8 92 54.3
FvH4_4g01070 Fragaria vesca HOM05D004569 ORTHO05D005333 9.2e-15 84.7 139 38.8
RcHm_v2.0_Chr6g0280701 Rosa chinensis HOM05D004569 ORTHO05D005333 1.6e-14 84.0 150 38.0
FvH4_5g27570 Fragaria vesca HOM05D004569 ORTHO05D005333 4.6e-14 82.4 153 37.9
Medtr6g045603 Medicago truncatula HOM05D004569 ORTHO05D005333 4.6e-14 82.4 141 41.1
RcHm_v2.0_Chr4g0387641 Rosa chinensis HOM05D004569 ORTHO05D005333 6.0e-14 82.0 150 37.3
AagrBONN_evm.TU.Sc2ySwM_228.788 Anthoceros agrestis HOM05D004569 ORTHO05D005333 1.3e-13 80.9 144 39.6
FAN12G4296 Fragaria x ananassa HOM05D004569 ORTHO05D005333 1.3e-13 80.9 139 38.1
Lj6C645G5 Lonicera japonica HOM05D004569 ORTHO05D005333 1.3e-13 80.9 131 38.9
Hma1.2p1_0549F.1_g176970 Hydrangea macrophylla HOM05D004569 ORTHO05D005333 2.3e-13 80.1 93 47.3
Pp3c21_14050 Physcomitrium patens HOM05D004569 ORTHO05D005333 3.0e-13 79.7 146 35.6
Mapoly0090s0037 Marchantia polymorpha HOM05D004569 ORTHO05D005333 3.9e-13 79.3 126 39.7
BcaB02g09711 Brassica carinata HOM05D004569 ORTHO05D005333 5.0e-13 79.0 132 46.2
BraA06t25922Z Brassica rapa HOM05D004569 ORTHO05D005333 4.3e-12 75.9 120 45.8
AT3G28956 Arabidopsis thaliana HOM05D004569 ORTHO05D005333 1.6e-11 73.9 66 56.1
Atru.chr5.182 Acer truncatum HOM05D004569 ORTHO05D005333 2.1e-11 73.6 131 40.5
AUR62033084 Chenopodium quinoa HOM05D004569 ORTHO05D005333 2.8e-11 73.2 163 33.7
FAN13G2556 Fragaria x ananassa HOM05D004569 ORTHO05D005333 1.4e-10 70.9 137 38.0
FAN18G3311 Fragaria x ananassa HOM05D004569 ORTHO05D005333 1.4e-10 70.9 143 37.1
vmacro08367 Vaccinium macrocarpon HOM05D004569 ORTHO05D005333 1.4e-10 70.9 135 37.0
Phvul.001G219600 Phaseolus vulgaris HOM05D004569 ORTHO05D005333 5.2e-10 68.9 131 38.2
arahy.Tifrunner.gnm1.ann1.LSLG48 Arachis hypogaea HOM05D001291 ORTHO05D005333 3.4e-09 66.2 90 46.7
GSVIVG01008529001 Vitis vinifera HOM05D004569 ORTHO05D005333 1.7e-08 63.9 63 52.4
SalBow2G3500 Salvia bowleyana HOM05D000011 ORTHO05D000018 4.9e-08 62.4 45 64.4
SMO343G0078 Selaginella moellendorffii HOM05D004569 ORTHO05D005333 4.9e-08 62.4 158 31.6
Hma1.2p1_0549F.1_g176960 Hydrangea macrophylla HOM05D004569 ORTHO05D005333 2.1e-06 57.0 38 73.7


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