Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004573g0060 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.1e-77 293.1 139 100.0
Nitab4.5_0003304g0040 Nicotiana tabacum HOM05D000445 ORTHO05D000314 5.2e-35 151.4 139 61.2
ClCG02G009750 Citrullus lanatus HOM05D000445 ORTHO05D000314 1.1e-29 133.7 166 48.8
HanXRQChr00c0454g0574911 Helianthus annuus HOM05D000445 ORTHO05D000314 1.6e-23 113.2 146 50.7
arahy.Tifrunner.gnm1.ann1.5ZHC49 Arachis hypogaea HOM05D000445 ORTHO05D000314 1.5e-18 96.7 68 73.5
Peaxi162Scf00003g02841 Petunia axillaris HOM05D000406 ORTHO05D002714 1.2e-15 87.0 52 73.1
Nn145s44086 Nelumbo nucifera HOM05D000445 ORTHO05D000314 2.7e-15 85.9 88 56.8
Nitab4.5_0011099g0040 Nicotiana tabacum HOM05D000445 ORTHO05D036881 9.6e-13 77.4 40 87.5
Solyc03g058250.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.6e-12 76.6 107 47.7
HanXRQChr00c0593g0576451 Helianthus annuus HOM05D000445 ORTHO05D000314 5.3e-11 71.6 53 66.0
Solyc04g039770.3 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.2e-10 70.5 54 66.7
Gohir.D01G101865 Gossypium hirsutum HOM05D000445 ORTHO05D000314 1.5e-10 70.1 37 89.2
Sed0004640 Sechium edule HOM05D000445 ORTHO05D000314 2.0e-10 69.7 77 53.2
BolC6t37542H Brassica oleracea HOM05D000477 ORTHO05D000338 2.6e-10 69.3 130 36.9
CAN.G1045.6 Capsicum annuum HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
CAN.G1178.3 Capsicum annuum HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
CAN.G267.20 Capsicum annuum HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
CAN.G745.36 Capsicum annuum HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
CAN.G8.28 Capsicum annuum HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Cpa.g.sc3885.1 Carica papaya HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Dinv09726 Davidia involucrata HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Dinv29308 Davidia involucrata HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Gorai.007G185000 Gossypium raimondii HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Hma1.2p1_0192F.1_g083680 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Hma1.2p1_1244F.1_g270040 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Hma1.2p1_1409F.1_g281670 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Hma1.2p1_4210F.1_g338452 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
LjContig00318g0026726 Lotus japonicus HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Nn021s41511 Nelumbo nucifera HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Nn031s41601 Nelumbo nucifera HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Nn233s45563 Nelumbo nucifera HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Nn301s46228 Nelumbo nucifera HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Nitab4.5_0001946g0030 Nicotiana tabacum HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Oeu058757.1 Olea europaea HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Peaxi162Scf00040g00123 Petunia axillaris HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Peaxi162Scf00299g00612 Petunia axillaris HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Potri.019G028400 Populus trichocarpa HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Solyc00g500147.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Sopen02g009120 Solanum pennellii HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Sopen10g008920 Solanum pennellii HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
PGSC0003DMG400020691 Solanum tuberosum HOM05D000445 ORTHO05D000314 4.4e-10 68.6 37 86.5
Gohir.A02G077401 Gossypium hirsutum HOM05D000445 ORTHO05D000314 5.8e-10 68.2 37 86.5
Gohir.A05G086350 Gossypium hirsutum HOM05D000445 ORTHO05D000314 5.8e-10 68.2 37 86.5
Gohir.D02G117422 Gossypium hirsutum HOM05D000445 ORTHO05D000314 5.8e-10 68.2 37 86.5
Gorai.010G075500 Gossypium raimondii HOM05D000445 ORTHO05D000314 5.8e-10 68.2 37 86.5
Medtr0689s0010 Medicago truncatula HOM05D000445 ORTHO05D000314 5.8e-10 68.2 37 86.5
CAN.G1648.15 Capsicum annuum HOM05D000445 ORTHO05D000314 7.6e-10 67.8 37 86.5
AL1G51280 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 9.9e-10 67.4 37 83.8
AL2G21800 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 9.9e-10 67.4 37 83.8
AL2G21840 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 9.9e-10 67.4 37 83.8
AL7G44060 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 9.9e-10 67.4 37 83.8
AL9U12050 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 9.9e-10 67.4 37 83.8
ATCG00860 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 9.9e-10 67.4 37 83.8
ATCG01280 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 9.9e-10 67.4 37 83.8
CARHR282560 Cardamine hirsuta HOM05D000445 ORTHO05D000314 9.9e-10 67.4 37 83.8
DCAR_032529 Daucus carota HOM05D000445 ORTHO05D000314 9.9e-10 67.4 37 83.8
DCAR_032547 Daucus carota HOM05D000445 ORTHO05D000314 9.9e-10 67.4 37 83.8
Lalb_Chr01g0014981 Lupinus albus HOM05D000445 ORTHO05D000314 9.9e-10 67.4 37 83.8
Cfa015164 Carpinus fangiana HOM05D000445 ORTHO05D000314 1.3e-09 67.0 37 83.8
Lj2A1239T196 Lonicera japonica HOM05D000445 ORTHO05D000314 1.3e-09 67.0 37 83.8
Lj2C1237G18 Lonicera japonica HOM05D000445 ORTHO05D000314 1.3e-09 67.0 37 83.8
Lj2C1238T14 Lonicera japonica HOM05D000445 ORTHO05D000314 1.3e-09 67.0 37 83.8
Lju5009C0G1 Lonicera japonica HOM05D000445 ORTHO05D000314 1.3e-09 67.0 37 83.8
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 1.3e-09 67.0 37 83.8
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 1.3e-09 67.0 37 83.8
unitig_91.g26489 Utricularia gibba HOM05D000445 ORTHO05D000314 1.3e-09 67.0 37 83.8
unitig_91.g26516 Utricularia gibba HOM05D000445 ORTHO05D000314 1.3e-09 67.0 37 83.8
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 1.3e-09 67.0 37 83.8
Nitab4.5_0000779g0100 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.7e-09 66.6 54 66.7
Solyc10g019000.3 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.7e-09 66.6 37 83.8
BraSC143t45644Z Brassica rapa HOM05D000445 ORTHO05D000314 2.2e-09 66.2 53 62.3
COL.COLO4_02324 Corchorus olitorius HOM05D000445 ORTHO05D000314 2.2e-09 66.2 33 90.9
arahy.Tifrunner.gnm1.ann1.9T9XDL Arachis hypogaea HOM05D000445 ORTHO05D000314 2.9e-09 65.9 37 83.8
arahy.Tifrunner.gnm1.ann1.SV0IPA Arachis hypogaea HOM05D000445 ORTHO05D000314 2.9e-09 65.9 37 83.8
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 2.9e-09 65.9 37 83.8
arahy.Tifrunner.gnm1.ann1.W863MP Arachis hypogaea HOM05D000445 ORTHO05D000314 2.9e-09 65.9 37 83.8
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 2.9e-09 65.9 37 83.8
CAN.G219.12 Capsicum annuum HOM05D000445 ORTHO05D000314 2.9e-09 65.9 37 81.1
CDE02G2037 Ceratophyllum demersum HOM05D000445 ORTHO05D000314 2.9e-09 65.9 37 83.8
MELO3C027250.2 Cucumis melo HOM05D000445 ORTHO05D000314 2.9e-09 65.9 37 81.1
Lj4g0020232 Lotus japonicus HOM05D000445 ORTHO05D000314 2.9e-09 65.9 37 83.8
Lalb_Chr07g0191931 Lupinus albus HOM05D000445 ORTHO05D000314 2.9e-09 65.9 37 81.1
Sed0002151 Sechium edule HOM05D000445 ORTHO05D000314 2.9e-09 65.9 37 81.1
Sed0006678 Sechium edule HOM05D000445 ORTHO05D000314 2.9e-09 65.9 37 81.1
Sed0014215 Sechium edule HOM05D000445 ORTHO05D000314 2.9e-09 65.9 37 81.1
Sed0022464 Sechium edule HOM05D000445 ORTHO05D000314 2.9e-09 65.9 37 81.1
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 2.9e-09 65.9 37 83.8
BNapus_Darmor_BZH_scaffold_287p00320 Brassica napus HOM05D000445 ORTHO05D000314 3.8e-09 65.5 37 81.1
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 3.8e-09 65.5 37 81.1
BolSC45t60924H Brassica oleracea HOM05D000445 ORTHO05D000314 3.8e-09 65.5 37 81.1
BraSC25t45894Z Brassica rapa HOM05D000445 ORTHO05D000314 3.8e-09 65.5 37 81.1
arahy.Tifrunner.gnm1.ann1.0T2FMW Arachis hypogaea HOM05D000445 ORTHO05D000314 4.9e-09 65.1 37 81.1
CAN.G129.16 Capsicum annuum HOM05D000445 ORTHO05D000314 6.4e-09 64.7 37 81.1
SalBow1G2382 Salvia bowleyana HOM05D000445 ORTHO05D000314 6.4e-09 64.7 37 81.1
SalBow1G2507 Salvia bowleyana HOM05D000445 ORTHO05D000314 6.4e-09 64.7 37 81.1
Glyma.16G065300 Glycine max HOM05D000445 ORTHO05D000314 8.4e-09 64.3 37 81.1
Phvul.003G094800 Phaseolus vulgaris HOM05D000445 ORTHO05D000314 8.4e-09 64.3 37 81.1
PGSC0003DMG400020533 Solanum tuberosum HOM05D000445 ORTHO05D000314 8.4e-09 64.3 37 78.4
Lalb_Chr12g0206621 Lupinus albus HOM05D000445 ORTHO05D000314 1.1e-08 63.9 37 78.4
CAN.G1739.2 Capsicum annuum HOM05D000445 ORTHO05D000314 1.4e-08 63.5 37 78.4
Gohir.A05G129275 Gossypium hirsutum HOM05D000445 ORTHO05D000314 1.4e-08 63.5 37 81.1
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 2.4e-08 62.8 37 78.4
CAN.G134.4 Capsicum annuum HOM05D000445 ORTHO05D000314 2.4e-08 62.8 37 78.4
FAN02G4578 Fragaria x ananassa HOM05D000445 ORTHO05D000314 2.4e-08 62.8 37 78.4
Nitab4.5_0000223g0180 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.4e-08 62.8 37 78.4
CAN.G1738.17 Capsicum annuum HOM05D000445 ORTHO05D000314 3.2e-08 62.4 37 78.4
CAN.G1875.2 Capsicum annuum HOM05D000445 ORTHO05D000314 3.2e-08 62.4 37 81.1
HanXRQChr00c0392g0574451 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-08 62.0 58 56.9
Gorai.009G345600 Gossypium raimondii HOM05D000445 ORTHO05D000314 5.4e-08 61.6 56 58.9
Nitab4.5_0001761g0110 Nicotiana tabacum HOM05D000445 ORTHO05D000314 5.4e-08 61.6 40 72.5
Thhalv10011098m.g Eutrema salsugineum HOM05D000445 ORTHO05D000314 7.1e-08 61.2 32 84.4
RcHm_v2.0_Chr2g0118431 Rosa chinensis HOM05D000445 ORTHO05D000314 9.3e-08 60.8 39 79.5
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 9.3e-08 60.8 39 79.5
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 9.3e-08 60.8 39 79.5
CAN.G100.37 Capsicum annuum HOM05D000445 ORTHO05D000314 1.2e-07 60.5 38 76.3
Gorai.002G166000 Gossypium raimondii HOM05D000445 ORTHO05D000314 1.2e-07 60.5 43 69.8
Gohir.D05G322050 Gossypium hirsutum HOM05D000445 ORTHO05D000314 1.6e-07 60.1 56 57.1
Nitab4.5_0000011g0350 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.6e-07 60.1 38 76.3
RcHm_v2.0_Chr2g0102151 Rosa chinensis HOM05D000445 ORTHO05D000314 2.1e-07 59.7 39 74.4
Solyc08g029400.3 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.1e-07 59.7 33 81.8
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 2.1e-07 59.7 36 77.8
VMungo0976G0001 Vigna mungo HOM05D000445 ORTHO05D000314 2.1e-07 59.7 36 77.8
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 2.7e-07 59.3 37 75.7
Gorai.005G222000 Gossypium raimondii HOM05D000445 ORTHO05D000314 2.7e-07 59.3 37 75.7
Actinidia34809 Actinidia chinensis HOM05D000445 ORTHO05D000314 3.5e-07 58.9 37 75.7
Aqoxy169s001 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 3.5e-07 58.9 38 76.3
Nitab4.5_0007979g0010 Nicotiana tabacum HOM05D000445 ORTHO05D000314 6.0e-07 58.2 32 78.1
Atru.chr5.1200 Acer truncatum HOM05D000445 ORTHO05D000314 7.9e-07 57.8 33 78.8
Aqoxy3G01862 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 7.9e-07 57.8 43 67.4
Solyc02g011920.2 Solanum lycopersicum HOM05D000445 ORTHO05D000314 7.9e-07 57.8 36 72.2
ClCG02G009780 Citrullus lanatus HOM05D000445 ORTHO05D010658 1.0e-06 57.4 33 81.8
Dinv13824 Davidia involucrata HOM05D000445 ORTHO05D000314 1.7e-06 56.6 37 70.3
Dinv23716 Davidia involucrata HOM05D004263 ORTHO05D004931 1.7e-06 56.6 37 70.3
Nitab4.5_0001379g0030 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.3e-06 56.2 31 83.9
CAN.G547.16 Capsicum annuum HOM05D000445 ORTHO05D000314 8.7e-06 54.3 65 46.2
Solyc09g061465.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 8.7e-06 54.3 65 46.2


User provided reference genes

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