Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004550g0090 Nicotiana tabacum HOM05D006490 ORTHO05D008301 8.3e-70 266.9 135 100.0
Nitab4.5_0010430g0030 Nicotiana tabacum HOM05D006490 ORTHO05D008301 1.7e-67 259.2 135 97.0
PGSC0003DMG400017050 Solanum tuberosum HOM05D006490 ORTHO05D008301 3.4e-63 245.0 133 91.7
Peaxi162Scf00021g00524 Petunia axillaris HOM05D006490 ORTHO05D008301 7.5e-63 243.8 135 91.1
Solyc01g091800.3 Solanum lycopersicum HOM05D006490 ORTHO05D008301 2.4e-61 238.8 133 89.5
Sopen01g037580 Solanum pennellii HOM05D006490 ORTHO05D008301 2.4e-61 238.8 133 89.5
CAN.G170.51 Capsicum annuum HOM05D006490 ORTHO05D008301 5.9e-60 234.2 131 89.3
ClCG05G001900 Citrullus lanatus HOM05D006490 ORTHO05D008301 2.9e-54 215.3 133 78.2
HanXRQChr06g0169021 Helianthus annuus HOM05D006490 ORTHO05D008301 1.1e-53 213.4 131 81.7
GSVIVG01027529001 Vitis vinifera HOM05D006490 ORTHO05D008301 3.2e-53 211.8 135 75.6
MSTRG.17232 Avicennia marina HOM05D006490 ORTHO05D008301 4.1e-53 211.5 135 75.6
COL.COLO4_12627 Corchorus olitorius HOM05D006490 ORTHO05D008301 5.4e-53 211.1 135 76.3
QL08p050661 Quercus lobata HOM05D006490 ORTHO05D008301 7.0e-53 210.7 133 77.4
TAR656G0005 Trochodendron aralioides HOM05D006490 ORTHO05D008301 1.6e-52 209.5 135 74.8
Nn1g01348 Nelumbo nucifera HOM05D006490 ORTHO05D008301 2.7e-52 208.8 135 74.8
TAR003G0001 Trochodendron aralioides HOM05D006490 ORTHO05D008301 2.7e-52 208.8 135 74.8
arahy.Tifrunner.gnm1.ann1.M2DA0A Arachis hypogaea HOM05D006490 ORTHO05D008301 3.5e-52 208.4 133 76.7
Thecc.01G368800 Theobroma cacao HOM05D006490 ORTHO05D008301 3.5e-52 208.4 135 74.8
Hma1.2p1_0398F.1_g143820 Hydrangea macrophylla HOM05D006490 ORTHO05D008301 4.6e-52 208.0 133 75.9
Potri.014G077100 Populus trichocarpa HOM05D006490 ORTHO05D008301 6.0e-52 207.6 135 75.6
Duzib138G1247 Durio zibethinus HOM05D006490 ORTHO05D008301 7.8e-52 207.2 135 74.8
Gohir.D11G088800 Gossypium hirsutum HOM05D006490 ORTHO05D008301 7.8e-52 207.2 135 74.8
Gorai.007G094900 Gossypium raimondii HOM05D006490 ORTHO05D008301 7.8e-52 207.2 135 74.8
MELO3C006150.2 Cucumis melo HOM05D006490 ORTHO05D008301 1.0e-51 206.8 133 75.9
CsaV3_3G009300 Cucumis sativus L. HOM05D006490 ORTHO05D008301 1.0e-51 206.8 133 75.2
Cc02_g37220 Coffea canephora HOM05D006490 ORTHO05D008301 2.3e-51 205.7 133 78.2
Cc02_g37650 Coffea canephora HOM05D006490 ORTHO05D008301 2.3e-51 205.7 133 78.2
DCAR_023894 Daucus carota HOM05D006490 ORTHO05D008301 3.0e-51 205.3 133 75.9
ECA236G2797 Erigeron canadensis HOM05D006490 ORTHO05D008301 3.0e-51 205.3 135 77.8
Gohir.A11G084700 Gossypium hirsutum HOM05D006490 ORTHO05D008301 3.0e-51 205.3 135 74.8
Manes.05G040300 Manihot esculenta HOM05D006490 ORTHO05D008301 3.9e-51 204.9 135 74.8
CSS0016422 Camellia sinensis var. sinensis HOM05D006490 ORTHO05D008301 5.0e-51 204.5 135 76.3
Ah.05g176030 Amaranthus hybridus HOM05D006490 ORTHO05D008301 6.6e-51 204.1 131 74.0
CiPaw.01G053400 Carya illinoinensis HOM05D006490 ORTHO05D008301 6.6e-51 204.1 133 75.2
Lj9A577G54 Lonicera japonica HOM05D006490 ORTHO05D008301 6.6e-51 204.1 133 73.7
AUR62033365 Chenopodium quinoa HOM05D006490 ORTHO05D008301 8.6e-51 203.8 135 71.9
RcHm_v2.0_Chr1g0352201 Rosa chinensis HOM05D006490 ORTHO05D008301 8.6e-51 203.8 133 73.7
VMungo1383G1476 Vigna mungo HOM05D006490 ORTHO05D008301 8.6e-51 203.8 133 75.9
CANSAT56G3458 Cannabis sativa HOM05D006490 ORTHO05D008301 1.1e-50 203.4 135 74.1
Lsat_1_v5_gn_7_8340 Lactuca sativa HOM05D006490 ORTHO05D008301 1.1e-50 203.4 133 75.9
Aqoxy5G03982 Aquilegia oxysepala HOM05D006490 ORTHO05D008301 1.5e-50 203.0 133 73.7
Migut.B01686 Erythranthe guttata HOM05D006490 ORTHO05D008301 1.5e-50 203.0 133 75.2
Glyma.18G227900 Glycine max HOM05D006490 ORTHO05D008301 1.5e-50 203.0 133 75.9
Glyma.09G264100 Glycine max HOM05D006490 ORTHO05D008301 1.9e-50 202.6 133 75.2
Actinidia33445 Actinidia chinensis HOM05D006490 ORTHO05D008301 2.5e-50 202.2 133 73.7
AUR62004290 Chenopodium quinoa HOM05D006490 ORTHO05D008301 3.3e-50 201.8 133 72.2
Medtr7g076280 Medicago truncatula HOM05D006490 ORTHO05D008301 3.3e-50 201.8 133 75.2
Phvul.008G070300 Phaseolus vulgaris HOM05D006490 ORTHO05D008301 3.3e-50 201.8 133 75.2
SGA_v2.0_scaffold153G37067 Striga asiatica HOM05D006490 ORTHO05D008301 4.3e-50 201.4 134 72.4
Oeu024418.2 Olea europaea HOM05D006490 ORTHO05D008301 5.6e-50 201.1 159 66.7
THA.LOC104814092 Tarenaya hassleriana HOM05D006490 ORTHO05D008301 5.6e-50 201.1 133 73.7
CARHR000480 Cardamine hirsuta HOM05D006490 ORTHO05D008301 1.2e-49 199.9 132 73.5
FAN10G3169 Fragaria x ananassa HOM05D006490 ORTHO05D008301 1.2e-49 199.9 131 74.8
MD07G1128700 Malus domestica HOM05D006490 ORTHO05D008301 1.2e-49 199.9 133 72.2
Rhsim01G0155600 Rhododendron simsii HOM05D006490 ORTHO05D008301 1.2e-49 199.9 142 71.8
Eucgr.D02236 Eucalyptus grandis HOM05D006490 ORTHO05D008301 1.6e-49 199.5 133 72.2
FAN10G0695 Fragaria x ananassa HOM05D006490 ORTHO05D008301 3.6e-49 198.4 131 74.0
Psat0s1132g0040 Pisum sativum HOM05D006490 ORTHO05D008301 3.6e-49 198.4 133 72.2
TPR.G37730 Trifolium pratense HOM05D006490 ORTHO05D008301 6.2e-49 197.6 133 71.4
arahy.Tifrunner.gnm1.ann1.90SIZ3 Arachis hypogaea HOM05D006490 ORTHO05D008301 8.1e-49 197.2 150 68.0
FAN03G0539 Fragaria x ananassa HOM05D006490 ORTHO05D008301 1.4e-48 196.4 131 73.3
FAN06G2547 Fragaria x ananassa HOM05D006490 ORTHO05D008301 1.4e-48 196.4 131 74.0
Lalb_Chr01g0021141 Lupinus albus HOM05D006490 ORTHO05D008301 1.8e-48 196.1 133 73.7
TWI59G0097 Tripterygium wilfordii HOM05D006490 ORTHO05D008301 2.3e-48 195.7 135 69.6
CiPaw.01G023700 Carya illinoinensis HOM05D006490 ORTHO05D008301 3.1e-48 195.3 146 68.5
Ca_07866_v3 Cicer arietinum L. HOM05D006490 ORTHO05D008301 3.1e-48 195.3 133 72.2
AL1G10470 Arabidopsis lyrata HOM05D006490 ORTHO05D008301 4.0e-48 194.9 132 72.7
AT1G01860 Arabidopsis thaliana HOM05D006490 ORTHO05D008301 4.0e-48 194.9 133 71.4
Thhalv10008101m.g Eutrema salsugineum HOM05D006490 ORTHO05D008301 4.0e-48 194.9 133 72.2
FAN01G0731 Fragaria x ananassa HOM05D006490 ORTHO05D008301 4.0e-48 194.9 131 72.5
Aa31LG1G11190 Aethionema arabicum HOM05D006373 ORTHO05D008145 5.2e-48 194.5 133 70.7
Atru.chr7.2364 Acer truncatum HOM05D006490 ORTHO05D008301 6.8e-48 194.1 134 70.9
Carub.0001s0036 Capsella rubella HOM05D006490 ORTHO05D008301 6.8e-48 194.1 133 70.7
Prupe.2G154300 Prunus persica HOM05D006490 ORTHO05D008301 6.8e-48 194.1 135 69.6
Sp1g00430 Schrenkiella parvula HOM05D006490 ORTHO05D008301 2.0e-47 192.6 133 71.4
C08p53880 Brassica napus HOM05D002904 ORTHO05D003206 4.4e-47 191.4 131 71.0
vmacro20973 Vaccinium macrocarpon HOM05D006490 ORTHO05D008301 7.5e-47 190.7 163 62.6
BraA09t42265Z Brassica rapa HOM05D002904 ORTHO05D003206 1.3e-46 189.9 131 70.2
FAN06G1200 Fragaria x ananassa HOM05D006490 ORTHO05D008301 2.9e-46 188.7 140 69.3
EL10Ac1g00964 Beta vulgaris HOM05D006490 ORTHO05D008301 2.4e-45 185.7 154 63.6
Cfa004180 Carpinus fangiana HOM05D006490 ORTHO05D008301 2.7e-44 182.2 113 77.9
PGR031G3648 Punica granatum HOM05D006490 ORTHO05D008301 1.0e-43 180.3 131 67.9
Hund27326 Selenicereus undatus HOM05D006490 ORTHO05D008301 1.0e-43 180.3 179 54.2
Ciclev10020970m.g Citrus clementina HOM05D006490 ORTHO05D008301 5.1e-43 177.9 114 75.4
Sc02g0002220 Simmondsia chinensis HOM05D006490 ORTHO05D008301 5.6e-42 174.5 113 76.1
BolC8t52902H Brassica oleracea HOM05D002904 ORTHO05D003206 9.5e-42 173.7 158 58.2
Sabra14G0055100 Salix brachista HOM05D006490 ORTHO05D008301 1.2e-41 173.3 182 53.8
PSO063G2041 Papaver somniferum HOM05D006490 ORTHO05D008301 3.6e-41 171.8 113 72.6
ATR0757G055 Amborella trichopoda HOM05D006490 ORTHO05D008301 6.2e-41 171.0 111 74.8
HPP92_016044 Vanilla planifolia HOM05D006490 ORTHO05D008301 6.2e-41 171.0 153 58.8
Lj1g0027165 Lotus japonicus HOM05D006490 ORTHO05D008301 1.1e-40 170.2 109 78.0
FvH4_7g13110 Fragaria vesca HOM05D006490 ORTHO05D008301 3.1e-40 168.7 113 74.3
Pp3c10_22230 Physcomitrium patens HOM05D006490 ORTHO05D008301 6.8e-40 167.5 131 64.1
CDE12G0440 Ceratophyllum demersum HOM05D006490 ORTHO05D008301 4.4e-39 164.9 113 72.6
Mapoly0057s0065 Marchantia polymorpha HOM05D006490 ORTHO05D008301 9.9e-39 163.7 131 60.3
Zm00001eb208500 Zea mays HOM05D006490 ORTHO05D008301 5.4e-37 157.9 113 68.1
SMO244G0093 Selaginella moellendorffii HOM05D006490 ORTHO05D008301 3.9e-35 151.8 132 56.1
MBI12_g25032_MAGBIO Magnolia biondii HOM05D006490 ORTHO05D008301 3.8e-30 135.2 88 76.1
Cpa.g.sc18.199 Carica papaya HOM05D006490 ORTHO05D008301 1.4e-29 133.3 84 78.6
SGA_v2.0_scaffold166G38351 Striga asiatica HOM05D006490 ORTHO05D008301 1.4e-29 133.3 110 62.7
Haze_15229 Corylus avellana HOM05D006490 ORTHO05D008301 1.0e-27 127.1 79 75.9
Gorai.009G376300 Gossypium raimondii HOM05D006490 ORTHO05D008301 1.9e-26 122.9 75 77.3
CBR_g5745 Chara braunii HOM05D006490 ORTHO05D008301 1.4e-24 116.7 138 48.6
SGA_v2.0_scaffold79G25583 Striga asiatica HOM05D006490 ORTHO05D008301 5.1e-19 98.2 76 68.4
MCO10G251 Micromonas commoda HOM05D006490 ORTHO05D008301 8.1e-17 90.9 130 36.9
Cre06.g309300 Chlamydomonas reinhardtii HOM05D006490 ORTHO05D008301 1.4e-16 90.1 127 38.6
AagrBONN_evm.TU.Sc2ySwM_228.858 Anthoceros agrestis HOM05D006490 ORTHO05D008301 2.4e-13 79.3 59 57.6
Dinv43755 Davidia involucrata HOM05D006490 ORTHO05D008301 2.4e-13 79.3 49 75.5
Sed0027884 Sechium edule HOM05D006490 ORTHO05D008301 7.1e-13 77.8 49 69.4
SGA_v2.0_scaffold35G14106 Striga asiatica HOM05D006490 ORTHO05D405018 4.6e-12 75.1 58 65.5
Sed0027241 Sechium edule HOM05D006490 ORTHO05D008301 1.5e-10 70.1 47 61.7
unitig_26.g9312 Utricularia gibba HOM05D006490 ORTHO05D008301 3.7e-09 65.5 76 50.0
Haze_15228 Corylus avellana HOM05D006490 ORTHO05D008301 4.0e-08 62.0 38 78.9


User provided reference genes

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