Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 0.0e+00 1281.9 668 100.0
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 0.0e+00 1211.1 668 94.8
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 6.3e-288 993.8 670 78.8
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 2.3e-282 975.3 670 77.2
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 2.9e-280 968.4 668 77.4
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 1.0e-261 906.7 632 77.8
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 2.9e-163 579.7 399 77.4
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 2.6e-132 476.9 672 44.6
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 6.9e-125 452.2 650 43.2
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 1.4e-122 444.5 649 43.0
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 4.2e-122 443.0 660 44.1
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 6.9e-117 425.6 684 42.5
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 3.2e-114 416.8 667 42.3
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 4.6e-113 412.9 638 44.5
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 1.3e-112 411.4 664 42.9
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 9.0e-109 398.7 663 39.5
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 3.9e-104 383.3 644 39.9
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 3.9e-104 383.3 697 39.9
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 3.7e-102 376.7 637 39.7
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 5.3e-101 372.9 658 38.9
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 1.2e-100 371.7 574 43.7
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 2.6e-100 370.5 600 40.7
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 3.0e-96 357.1 653 37.5
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 8.2e-94 349.0 639 39.3
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 1.8e-93 347.8 656 36.7
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 3.1e-93 347.1 640 39.4
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 5.3e-93 346.3 649 38.2
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 1.7e-91 341.3 683 35.6
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 8.5e-91 339.0 651 35.9
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 1.1e-90 338.6 636 39.5
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 1.1e-90 338.6 683 35.4
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 2.5e-90 337.4 637 38.5
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 4.2e-90 336.7 672 37.1
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 4.2e-90 336.7 642 36.8
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 1.2e-89 335.1 671 37.0
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 3.0e-88 330.5 537 43.2
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 3.0e-88 330.5 655 37.1
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 8.8e-88 328.9 680 35.1
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 2.6e-87 327.4 641 35.7
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 2.4e-85 320.9 651 36.6
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 3.0e-80 303.9 648 36.0
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.0e-79 301.2 646 36.1
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 4.4e-79 300.1 648 36.1
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 8.2e-78 295.8 653 34.8
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 1.2e-76 292.0 658 35.9
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 4.5e-76 290.0 658 35.7
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 2.9e-75 287.3 635 34.5
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 6.5e-75 286.2 638 34.8
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 2.5e-74 284.3 663 33.5
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 4.2e-74 283.5 673 34.3
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 2.1e-73 281.2 673 33.4
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 8.0e-73 279.3 655 34.2
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 1.8e-72 278.1 610 35.1
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 7.5e-71 272.7 647 33.4
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 2.9e-67 260.8 677 31.9
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 2.5e-66 257.7 659 31.9
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 4.0e-64 250.4 650 31.8
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 1.1e-61 242.3 543 33.9
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 1.8e-61 241.5 609 33.0
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 9.1e-61 239.2 541 35.1
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 2.0e-60 238.0 442 38.0
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 7.7e-60 236.1 545 34.9
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 4.2e-58 230.3 586 33.3
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 2.3e-56 224.6 596 32.7
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 6.8e-56 223.0 606 30.5
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 9.8e-55 219.2 372 40.3
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 2.9e-54 217.6 543 33.3
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 8.3e-54 216.1 596 31.9
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 2.4e-53 214.5 368 40.8
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 3.2e-53 214.2 595 30.9
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 7.0e-53 213.0 729 29.4
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 1.2e-52 212.2 667 29.7
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 2.5e-50 204.5 595 30.1
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 2.8e-49 201.1 567 31.6
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 6.1e-49 199.9 671 28.8
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 1.8e-48 198.4 590 32.0
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 5.2e-48 196.8 643 30.2
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 8.9e-48 196.1 624 29.8
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 8.9e-48 196.1 624 29.8
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 5.8e-47 193.4 667 28.3
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 7.5e-47 193.0 602 30.2
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 2.2e-46 191.4 667 28.5
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 1.4e-45 188.7 663 29.3
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 4.1e-45 187.2 550 32.7
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 5.4e-45 186.8 632 30.5
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 2.7e-44 184.5 603 30.0
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 6.0e-44 183.3 664 28.3
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 8.6e-43 179.5 385 33.5
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 2.5e-42 177.9 643 28.5
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 2.8e-41 174.5 386 33.2
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 2.8e-41 174.5 386 33.4
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 1.7e-38 165.2 656 27.9
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 2.9e-38 164.5 605 27.4
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 2.1e-36 158.3 656 28.5
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 2.7e-36 157.9 360 33.1
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 8.6e-35 152.9 558 28.3
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 4.7e-33 147.1 641 28.5
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 2.1e-28 131.7 426 29.3
Cpa.g.c34985.1 Carica papaya HOM05D006728 ORTHO05D007911 1.4e-24 119.0 250 33.6
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 1.4e-24 119.0 302 31.8
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 1.5e-15 89.0 291 30.6
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 5.8e-15 87.0 620 23.5
Atru.chr1.2803 Acer truncatum HOM05D006728 ORTHO05D007911 2.9e-14 84.7 130 42.3
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 7.9e-12 76.6 118 39.0
Os02g0461200 Oryza sativa ssp. japonica HOM05D006728 ORTHO05D007911 1.7e-11 75.5 468 23.7
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 5.6e-10 70.5 519 23.1
Glyma.20G198732 Glycine max HOM05D006728 ORTHO05D007911 1.5e-07 62.4 129 36.4


User provided reference genes

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