Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004339g0060 Nicotiana tabacum HOM05D007520 ORTHO05D009417 1.2e-127 459.9 235 100.0
Nitab4.5_0010118g0020 Nicotiana tabacum HOM05D007520 ORTHO05D009417 2.2e-118 429.1 234 92.7
PGSC0003DMG400041336 Solanum tuberosum HOM05D001905 ORTHO05D001820 7.6e-95 350.9 234 79.5
Sopen04g032100 Solanum pennellii HOM05D007520 ORTHO05D009417 1.7e-94 349.7 234 78.2
CAN.G1812.4 Capsicum annuum HOM05D007520 ORTHO05D009417 4.6e-92 341.7 232 77.2
Solyc04g078500.1 Solanum lycopersicum HOM05D007520 ORTHO05D009417 4.6e-92 341.7 234 77.8
Migut.L00619 Erythranthe guttata HOM05D007520 ORTHO05D009417 1.6e-73 280.0 232 62.9
CANSAT78G2519 Cannabis sativa HOM05D007520 ORTHO05D009417 1.4e-72 276.9 234 64.1
Prupe.1G338000 Prunus persica HOM05D007520 ORTHO05D009417 1.9e-69 266.5 227 62.1
MD13G1015700 Malus domestica HOM05D007520 ORTHO05D009417 2.5e-69 266.2 229 63.3
RcHm_v2.0_Chr4g0433681 Rosa chinensis HOM05D007520 ORTHO05D009417 8.7e-67 257.7 225 60.0
Gorai.008G169800 Gossypium raimondii HOM05D007520 ORTHO05D009417 1.9e-66 256.5 226 58.8
Sed0012329 Sechium edule HOM05D007520 ORTHO05D009417 3.3e-66 255.8 226 60.6
TWI53G0076 Tripterygium wilfordii HOM05D007520 ORTHO05D009417 4.3e-66 255.4 225 59.6
MELO3C020056.2 Cucumis melo HOM05D007520 ORTHO05D009417 1.3e-65 253.8 231 58.9
Duzib268G1867 Durio zibethinus HOM05D007520 ORTHO05D009417 3.7e-65 252.3 226 57.5
TAR374G0082 Trochodendron aralioides HOM05D000504 ORTHO05D000403 1.4e-64 250.4 218 61.5
FvH4_4g26110 Fragaria vesca HOM05D007520 ORTHO05D009417 2.4e-64 249.6 224 58.0
CsaV3_5G012990 Cucumis sativus L. HOM05D007520 ORTHO05D009417 3.1e-64 249.2 231 57.1
Aqoxy5G01264 Aquilegia oxysepala HOM05D007520 ORTHO05D009417 4.1e-64 248.8 225 56.9
Manes.17G089333 Manihot esculenta HOM05D007520 ORTHO05D009417 5.3e-64 248.4 228 60.1
ECA246G0416 Erigeron canadensis HOM05D007520 ORTHO05D009417 1.2e-63 247.3 235 58.7
Nn4g24547 Nelumbo nucifera HOM05D007520 ORTHO05D009417 2.0e-63 246.5 233 57.5
SGA_v2.0_scaffold172G39028 Striga asiatica HOM05D007520 ORTHO05D009417 7.7e-63 244.6 231 56.3
THA.LOC104824117 Tarenaya hassleriana HOM05D007520 ORTHO05D009417 7.7e-63 244.6 224 60.3
Ciclev10016556m.g Citrus clementina HOM05D007520 ORTHO05D009417 3.8e-62 242.3 208 63.9
TPR.G35527 Trifolium pratense HOM05D007520 ORTHO05D009417 6.5e-62 241.5 225 58.2
Lj2g0009613 Lotus japonicus HOM05D007520 ORTHO05D009417 8.5e-62 241.1 222 58.6
PGR042G3173 Punica granatum HOM05D007520 ORTHO05D009417 8.5e-62 241.1 224 56.2
Psat6g100600 Pisum sativum HOM05D007520 ORTHO05D009417 1.1e-61 240.7 228 57.5
Actinidia11793 Actinidia chinensis HOM05D007520 ORTHO05D009417 4.2e-61 238.8 203 64.0
Thhalv10005705m.g Eutrema salsugineum HOM05D007520 ORTHO05D009417 1.2e-60 237.3 224 60.3
Medtr1g038820 Medicago truncatula HOM05D007520 ORTHO05D009417 2.1e-60 236.5 228 56.1
Phvul.003G001900 Phaseolus vulgaris HOM05D007520 ORTHO05D009417 7.9e-60 234.6 220 58.2
PSO017G5472 Papaver somniferum HOM05D007520 ORTHO05D009417 1.0e-59 234.2 231 55.4
CiPaw.06G058600 Carya illinoinensis HOM05D007520 ORTHO05D009417 3.0e-59 232.6 220 60.9
PSO478G1043 Papaver somniferum HOM05D007520 ORTHO05D009417 6.7e-59 231.5 236 53.8
BolC7t43791H Brassica oleracea HOM05D007520 ORTHO05D009417 1.1e-58 230.7 225 58.2
Hma1.2p1_0095F.1_g047520 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 2.0e-58 229.9 201 61.2
QL03p039135 Quercus lobata HOM05D007520 ORTHO05D009417 2.5e-58 229.6 201 62.2
AT2G01905 Arabidopsis thaliana HOM05D007520 ORTHO05D009417 4.3e-58 228.8 224 58.0
BraA06t27270Z Brassica rapa HOM05D007520 ORTHO05D009417 5.7e-58 228.4 225 57.3
CARHR144480 Cardamine hirsuta HOM05D007520 ORTHO05D009417 9.7e-58 227.6 224 56.7
Sp2g13330 Schrenkiella parvula HOM05D007520 ORTHO05D009417 4.8e-57 225.3 224 57.6
AL5G11020 Arabidopsis lyrata HOM05D007520 ORTHO05D009417 8.2e-57 224.6 224 56.2
EL10Ac1g01972 Beta vulgaris HOM05D007520 ORTHO05D009417 1.4e-56 223.8 229 50.7
C07p32740 Brassica napus HOM05D007520 ORTHO05D009417 5.3e-56 221.9 225 57.3
VMungo0251G1805 Vigna mungo HOM05D007520 ORTHO05D009417 5.3e-56 221.9 220 58.2
Ah.11g041100 Amaranthus hybridus HOM05D007520 ORTHO05D009417 6.9e-56 221.5 227 49.3
COL.COLO4_27582 Corchorus olitorius HOM05D007520 ORTHO05D009417 6.9e-56 221.5 201 57.7
A06p43940 Brassica napus HOM05D007520 ORTHO05D009417 1.5e-55 220.3 225 56.9
HanXRQChr12g0379401 Helianthus annuus HOM05D007520 ORTHO05D009417 7.7e-55 218.0 213 55.9
Sc15g0004470 Simmondsia chinensis HOM05D007520 ORTHO05D009417 1.1e-53 214.2 225 50.2
arahy.Tifrunner.gnm1.ann1.RL07R4 Arachis hypogaea HOM05D007520 ORTHO05D009417 6.1e-52 208.4 200 58.0
Thecc.02G303900 Theobroma cacao HOM05D007520 ORTHO05D009417 4.4e-50 202.2 170 60.0
FAN12G3032 Fragaria x ananassa HOM05D007520 ORTHO05D009417 7.4e-50 201.4 199 57.3
FAN12G3090 Fragaria x ananassa HOM05D007520 ORTHO05D009417 7.4e-50 201.4 199 57.3
Atru.chr11.1007 Acer truncatum HOM05D007520 ORTHO05D009417 9.7e-50 201.1 193 59.6
BcaC06g31264 Brassica carinata HOM05D007520 ORTHO05D009417 1.7e-49 200.3 203 56.7
Aa31LG2G8010 Aethionema arabicum HOM05D007520 ORTHO05D009417 2.2e-49 199.9 230 53.5
FAN17G2852 Fragaria x ananassa HOM05D007520 ORTHO05D009417 7.7e-47 191.4 226 50.9
Lalb_Chr10g0094861 Lupinus albus HOM05D007520 ORTHO05D009417 7.2e-45 184.9 185 56.8
Lsat_1_v5_gn_5_170921 Lactuca sativa HOM05D007520 ORTHO05D009417 1.2e-44 184.1 206 52.4
Zm00001eb010100 Zea mays HOM05D007520 ORTHO05D009417 2.1e-44 183.3 205 46.8
Glyma.14G224300 Glycine max HOM05D007520 ORTHO05D009417 1.8e-43 180.3 154 61.0
AUR62036879 Chenopodium quinoa HOM05D007520 ORTHO05D009417 5.3e-40 168.7 163 49.7
PGSC0003DMG400013121 Solanum tuberosum HOM05D007520 ORTHO05D009417 1.7e-38 163.7 119 73.1
Gohir.D12G157000 Gossypium hirsutum HOM05D007520 ORTHO05D009417 2.9e-38 162.9 226 42.5
Gohir.A12G153900 Gossypium hirsutum HOM05D007520 ORTHO05D009417 8.5e-38 161.4 226 42.0
FAN22G1570 Fragaria x ananassa HOM05D000296 ORTHO05D000175 2.0e-34 150.2 137 57.7
MSTRG.8107 Avicennia marina HOM05D007520 ORTHO05D009417 4.4e-34 149.1 119 67.2
Atru.BG.295.p Acer truncatum HOM05D007520 ORTHO05D009417 5.7e-34 148.7 131 61.8
SalBow4G2630 Salvia bowleyana HOM05D007520 ORTHO05D009417 2.4e-32 143.3 127 61.4
Cc11_g05730 Coffea canephora HOM05D007520 ORTHO05D009417 3.1e-32 142.9 114 63.2
Dinv08902 Davidia involucrata HOM05D007520 ORTHO05D009417 3.1e-32 142.9 138 61.6
SalBow3G0394 Salvia bowleyana HOM05D007520 ORTHO05D009417 5.4e-32 142.1 117 65.0
Rhsim09G0085600 Rhododendron simsii HOM05D007520 ORTHO05D009417 1.3e-30 137.5 172 50.0
GSVIVG01011595001 Vitis vinifera HOM05D007520 ORTHO05D009417 6.5e-30 135.2 113 61.9
Hma1.2p1_0095F.1_g047530 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 7.2e-29 131.7 228 40.4
CSS0024703 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 2.1e-28 130.2 138 50.7
CSS0021820 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 6.1e-28 128.6 120 56.7
CSS0032687 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 6.1e-28 128.6 120 56.7
DCAR_002655 Daucus carota HOM05D007520 ORTHO05D009417 6.1e-28 128.6 139 53.2
GSVIVG01011596001 Vitis vinifera HOM05D007520 ORTHO05D009417 1.0e-27 127.9 108 61.1
SalBow6G7185 Salvia bowleyana HOM05D007520 ORTHO05D009417 2.8e-25 119.8 103 64.1
Carub.0005s0090 Capsella rubella HOM05D007520 ORTHO05D009417 1.1e-24 117.9 110 58.2
Carub.0005s0089 Capsella rubella HOM05D007520 ORTHO05D009417 1.8e-24 117.1 123 54.5
CSS0003025 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 5.4e-24 115.5 138 46.4
ClCG11G001000 Citrullus lanatus HOM05D007520 ORTHO05D009417 2.0e-23 113.6 143 46.9
Lj3A859T72 Lonicera japonica HOM05D007520 ORTHO05D009417 1.9e-21 107.1 132 50.0
HPP92_016407 Vanilla planifolia HOM05D007520 ORTHO05D009417 1.9e-21 107.1 119 47.1
SalBow2G3493 Salvia bowleyana HOM05D007520 ORTHO05D009417 2.5e-21 106.7 91 64.8
Mapoly0059s0009 Marchantia polymorpha HOM05D007520 ORTHO05D009417 1.6e-20 104.0 225 27.6
Dinv08901 Davidia involucrata HOM05D007520 ORTHO05D009417 4.7e-20 102.4 70 70.0
CSS0008274 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 5.7e-18 95.5 66 69.7
CDE06G1244 Ceratophyllum demersum HOM05D007520 ORTHO05D009417 7.5e-18 95.1 100 47.0
Haze_10814 Corylus avellana HOM05D007520 ORTHO05D009417 4.9e-17 92.4 77 64.9
Eucgr.B02652 Eucalyptus grandis HOM05D007520 ORTHO05D009417 4.1e-16 89.4 73 57.5
AUR62032185 Chenopodium quinoa HOM05D007520 ORTHO05D009417 1.2e-15 87.8 89 48.3
AUR62026615 Chenopodium quinoa HOM05D007520 ORTHO05D009417 7.8e-15 85.1 103 40.8
HPP92_016406 Vanilla planifolia HOM05D007520 ORTHO05D009417 3.9e-14 82.8 70 61.4
Pp3c10_19450 Physcomitrium patens HOM05D007520 ORTHO05D009417 7.3e-13 78.6 161 28.6
AUR62033544 Chenopodium quinoa HOM05D000122 ORTHO05D009417 1.2e-07 61.2 83 41.0


User provided reference genes

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