Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004300g0080 Nicotiana tabacum HOM05D011968 ORTHO05D014241 1.2e-109 399.8 198 100.0
Nitab4.5_0013560g0040 Nicotiana tabacum HOM05D011968 ORTHO05D014241 9.6e-75 283.9 204 74.0
Nitab4.5_0010333g0110 Nicotiana tabacum HOM05D011968 ORTHO05D014241 3.5e-61 238.8 164 75.6
Nitab4.5_0012599g0070 Nicotiana tabacum HOM05D011968 ORTHO05D014241 1.9e-59 233.0 174 71.3
Nitab4.5_0010586g0020 Nicotiana tabacum HOM05D011968 ORTHO05D014241 3.0e-52 209.1 123 85.4
Nitab4.5_0000866g0220 Nicotiana tabacum HOM05D011968 ORTHO05D014241 8.7e-52 207.6 152 72.4
Nitab4.5_0005831g0080 Nicotiana tabacum HOM05D011968 ORTHO05D014241 3.7e-50 202.2 176 64.8
Nitab4.5_0002093g0160 Nicotiana tabacum HOM05D011968 ORTHO05D014241 7.4e-43 177.9 147 66.0
Nitab4.5_0000085g0170 Nicotiana tabacum HOM05D011968 ORTHO05D014241 1.0e-31 141.0 150 54.7
Nitab4.5_0000819g0040 Nicotiana tabacum HOM05D002921 ORTHO05D003258 2.0e-16 90.1 53 77.4
Nitab4.5_0000866g0230 Nicotiana tabacum HOM05D011968 ORTHO05D014241 6.5e-15 85.1 49 83.7
Lj2P1228T81 Lonicera japonica HOM05D011380 ORTHO05D019448 6.8e-12 75.1 59 71.2
Nitab4.5_0000844g0150 Nicotiana tabacum HOM05D011968 ORTHO05D014241 2.0e-11 73.6 100 43.0
MBI03_g45449_MAGBIO Magnolia biondii HOM05D017124 ORTHO05D017284 5.7e-11 72.0 137 40.9
CAN.G1109.11 Capsicum annuum HOM05D002660 ORTHO05D003902 3.7e-10 69.3 117 40.2
MBI05_g23324_MAGBIO Magnolia biondii HOM05D017124 ORTHO05D017284 3.7e-10 69.3 112 43.8
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.7e-10 69.3 117 41.0
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.7e-10 69.3 117 41.0
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.7e-10 69.3 117 41.0
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.7e-10 69.3 117 41.0
Sopen00g006790 Solanum pennellii HOM05D002660 ORTHO05D003902 3.7e-10 69.3 117 41.0
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 3.7e-10 69.3 117 41.0
Nn1g10174 Nelumbo nucifera HOM05D011968 ORTHO05D014241 6.3e-10 68.6 35 88.6
Nn2g13591 Nelumbo nucifera HOM05D011968 ORTHO05D014241 6.3e-10 68.6 35 88.6
CAN.G1.6 Capsicum annuum HOM05D002660 ORTHO05D003902 1.1e-09 67.8 124 37.9
CAN.G85.19 Capsicum annuum HOM05D002660 ORTHO05D003902 1.1e-09 67.8 120 39.2
MBI05_g05343_MAGBIO Magnolia biondii HOM05D000445 ORTHO05D000314 1.4e-09 67.4 168 30.4
CAN.G1167.16 Capsicum annuum HOM05D002660 ORTHO05D003902 1.8e-09 67.0 117 39.3
Nitab4.5_0000172g0790 Nicotiana tabacum HOM05D011968 ORTHO05D014241 5.4e-09 65.5 36 83.3
Solyc03g063470.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.2e-08 64.3 120 39.2
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 2.7e-08 63.2 120 35.8
Lalb_Chr00c24g0406851 Lupinus albus HOM05D002660 ORTHO05D003902 2.7e-08 63.2 125 36.8
MBI05_g11249_MAGBIO Magnolia biondii HOM05D017124 ORTHO05D017284 5.9e-08 62.0 66 53.0
CAN.G999.39 Capsicum annuum HOM05D002660 ORTHO05D003902 1.0e-07 61.2 117 37.6
arahy.Tifrunner.gnm1.ann1.HMG3T6 Arachis hypogaea HOM05D002660 ORTHO05D003902 2.3e-07 60.1 100 39.0
COL.COLO4_02507 Corchorus olitorius HOM05D002660 ORTHO05D003902 2.9e-07 59.7 82 40.2
MBI14_g44092_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 6.6e-07 58.5 176 29.0
Solyc00g142170.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 6.6e-07 58.5 119 36.1
Sopen11g018230 Solanum pennellii HOM05D002660 ORTHO05D003902 8.6e-07 58.2 116 32.8
arahy.Tifrunner.gnm1.ann1.BS65NI Arachis hypogaea HOM05D002660 ORTHO05D003902 1.9e-06 57.0 111 33.3
arahy.Tifrunner.gnm1.ann1.P7KX5B Arachis hypogaea HOM05D002660 ORTHO05D003902 1.9e-06 57.0 111 33.3
arahy.Tifrunner.gnm1.ann1.QMNG84 Arachis hypogaea HOM05D002660 ORTHO05D003902 1.9e-06 57.0 111 33.3
CAN.G26.9 Capsicum annuum HOM05D002660 ORTHO05D003902 1.9e-06 57.0 116 32.8
CAN.G72.10 Capsicum annuum HOM05D002660 ORTHO05D003902 1.9e-06 57.0 109 37.6
PGSC0003DMG400001137 Solanum tuberosum HOM05D002660 ORTHO05D003902 2.5e-06 56.6 116 35.3
arahy.Tifrunner.gnm1.ann1.8U7R2G Arachis hypogaea HOM05D002660 ORTHO05D003902 3.3e-06 56.2 111 33.3
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 4.3e-06 55.8 111 34.2
Solyc00g500255.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 4.3e-06 55.8 116 35.3
Gorai.001G165500 Gossypium raimondii HOM05D011380 ORTHO05D016005 9.5e-06 54.7 161 33.5


User provided reference genes

Program Settings