Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004221g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.2e-172 609.8 322 100.0
Nitab4.5_0006902g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.5e-80 303.9 271 61.6
Nitab4.5_0002386g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.2e-80 301.6 253 66.8
Nitab4.5_0004443g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.1e-79 300.1 274 62.4
Nitab4.5_0005746g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.7e-79 298.9 323 56.7
Nitab4.5_0002753g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.0e-78 297.7 285 60.4
Nitab4.5_0000583g0300 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.8e-78 297.0 292 58.9
Nitab4.5_0000782g0140 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.0e-78 295.8 275 62.9
Nitab4.5_0000025g0270 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.8e-78 294.7 274 61.3
Nitab4.5_0001106g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.9e-76 288.9 279 61.6
Nitab4.5_0002782g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.3e-76 288.1 407 46.9
Nitab4.5_0000843g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.9e-72 276.9 322 53.4
Nitab4.5_0006574g0110 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.5e-69 267.3 267 58.4
Nitab4.5_0001861g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.4e-67 260.0 269 56.9
Nitab4.5_0003145g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.4e-67 258.8 273 60.4
Nitab4.5_0008386g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.6e-66 255.8 195 70.3
Nitab4.5_0003611g0050 Nicotiana tabacum HOM05D000045 ORTHO05D002701 3.9e-65 252.7 212 64.6
Nitab4.5_0004091g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.5e-64 250.0 252 57.5
Nitab4.5_0003463g0100 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.3e-64 248.4 288 53.5
Nitab4.5_0001488g0190 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.0e-62 242.7 237 57.8
Nitab4.5_0003370g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.6e-61 240.0 384 42.7
Nitab4.5_0002145g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 9.8e-61 238.0 297 51.5
Nitab4.5_0001781g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.4e-60 235.3 249 55.0
Nitab4.5_0000095g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.5e-58 229.6 322 47.5
Nitab4.5_0011951g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.3e-57 226.9 270 54.1
Nitab4.5_0000669g0150 Nicotiana tabacum HOM05D000045 ORTHO05D002701 3.0e-57 226.5 351 42.7
Nitab4.5_0006745g0050 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.1e-54 218.0 240 54.2
Nitab4.5_0000707g0210 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.9e-54 214.9 311 51.4
Nitab4.5_0002791g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.2e-52 210.3 208 56.2
Nitab4.5_0000082g0390 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.9e-52 209.9 295 44.7
Nitab4.5_0001432g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.6e-50 202.6 228 51.3
Nitab4.5_0001031g0050 Nicotiana tabacum HOM05D000045 ORTHO05D002701 6.6e-49 198.7 334 42.2
Nitab4.5_0014556g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.8e-45 185.7 135 69.6
Nitab4.5_0000092g0160 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.4e-44 182.2 202 55.0
Nitab4.5_0005781g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.6e-41 172.2 191 55.5
Nitab4.5_0013768g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.6e-39 167.5 149 61.1
Nitab4.5_0005934g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.6e-39 166.4 197 51.3
Nitab4.5_0001168g0180 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.7e-36 157.5 170 49.4
Nitab4.5_0001246g0030 Nicotiana tabacum HOM05D000045 ORTHO05D002701 6.4e-36 155.6 181 44.8
Nitab4.5_0002309g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.3e-33 147.9 262 41.2
Nitab4.5_0004837g0080 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.3e-33 147.1 176 43.8
Nitab4.5_0000127g0030 Nicotiana tabacum HOM05D000045 ORTHO05D002701 3.0e-33 146.7 188 56.4
Nitab4.5_0003552g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.9e-33 146.4 157 48.4
Nitab4.5_0000188g0280 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.1e-31 138.7 170 50.6
Nitab4.5_0001021g0150 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.2e-29 134.8 178 42.1
Nitab4.5_0003881g0030 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.0e-29 134.0 181 42.0
Nitab4.5_0004193g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.0e-29 134.0 160 51.2
Nitab4.5_0002352g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 9.9e-29 131.7 145 48.3
Nitab4.5_0000260g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.2e-26 124.8 170 41.2
Nitab4.5_0001957g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.3e-24 116.3 270 37.8
Nitab4.5_0001727g0190 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.6e-23 114.4 163 41.1
Nitab4.5_0000540g0130 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.1e-23 114.0 63 85.7
Nitab4.5_0009228g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.0e-22 109.8 118 56.8
Nitab4.5_0004798g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 9.9e-21 105.1 168 42.9
CAN.G362.28 Capsicum annuum HOM05D004033 ORTHO05D002701 8.4e-20 102.1 152 38.2
Migut.M00234 Erythranthe guttata HOM05D000045 ORTHO05D000067 1.1e-19 101.7 137 40.9
CAN.G69.26 Capsicum annuum HOM05D004033 ORTHO05D002701 4.2e-19 99.8 121 42.1
Nitab4.5_0000391g0230 Nicotiana tabacum HOM05D000045 ORTHO05D002701 3.5e-18 96.7 284 33.5
Nitab4.5_0009727g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.6e-18 96.3 147 39.5
Nitab4.5_0002211g0170 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.9e-17 93.2 149 37.6
CAN.G2043.1 Capsicum annuum HOM05D000045 ORTHO05D002701 6.7e-17 92.4 122 40.2
CAN.G2880.1 Capsicum annuum HOM05D000045 ORTHO05D002701 6.7e-17 92.4 122 40.2
CAN.G595.1 Capsicum annuum HOM05D004033 ORTHO05D002701 8.7e-17 92.0 162 37.7
Nitab4.5_0004465g0080 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.5e-16 91.3 264 33.7
CAN.G160.45 Capsicum annuum HOM05D004033 ORTHO05D002701 2.5e-16 90.5 153 34.0
Nitab4.5_0010440g0020 Nicotiana tabacum HOM05D008635 ORTHO05D285645 2.5e-16 90.5 48 89.6
Nitab4.5_0002524g0020 Nicotiana tabacum HOM05D008635 ORTHO05D005319 4.3e-16 89.7 50 88.0
Nitab4.5_0002128g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.6e-16 89.4 156 35.3
Nitab4.5_0001081g0020 Nicotiana tabacum HOM05D008635 ORTHO05D286855 7.4e-16 89.0 50 88.0
Nitab4.5_0012288g0010 Nicotiana tabacum HOM05D008635 ORTHO05D285747 7.4e-16 89.0 50 86.0
Peaxi162Scf00856g00315 Petunia axillaris HOM05D000045 ORTHO05D002701 7.4e-16 89.0 94 40.4
Nitab4.5_0001081g0050 Nicotiana tabacum HOM05D008635 ORTHO05D284045 1.6e-15 87.8 50 86.0
Nitab4.5_0000423g0030 Nicotiana tabacum HOM05D008635 ORTHO05D283476 2.1e-15 87.4 48 87.5
Nitab4.5_0005533g0010 Nicotiana tabacum HOM05D008635 ORTHO05D283025 2.1e-15 87.4 50 86.0
Nitab4.5_0003780g0050 Nicotiana tabacum HOM05D008635 ORTHO05D285020 3.7e-15 86.7 45 88.9
Nitab4.5_0008782g0090 Nicotiana tabacum HOM05D008635 ORTHO05D283068 1.1e-14 85.1 44 90.9
Nitab4.5_0010152g0010 Nicotiana tabacum HOM05D008635 ORTHO05D286128 1.1e-14 85.1 48 85.4
Manes.09G081652 Manihot esculenta HOM05D000045 ORTHO05D000067 1.4e-14 84.7 78 47.4
Nitab4.5_0000216g0280 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.4e-14 84.7 205 30.7
Nitab4.5_0005584g0010 Nicotiana tabacum HOM05D008635 ORTHO05D285296 2.4e-14 84.0 48 83.3
Nitab4.5_0003351g0130 Nicotiana tabacum HOM05D000045 ORTHO05D002701 3.1e-14 83.6 66 57.6
Nitab4.5_0003698g0110 Nicotiana tabacum HOM05D008635 ORTHO05D286328 4.0e-14 83.2 48 85.4
CAN.G14674.1 Capsicum annuum HOM05D004033 ORTHO05D002701 6.9e-14 82.4 120 38.3
CAN.G616.23 Capsicum annuum HOM05D004033 ORTHO05D002701 6.9e-14 82.4 100 41.0
CAN.G124.18 Capsicum annuum HOM05D004033 ORTHO05D002701 1.2e-13 81.6 137 35.8
Nitab4.5_0003583g0050 Nicotiana tabacum HOM05D008635 ORTHO05D283989 1.2e-13 81.6 47 83.0
Nitab4.5_0004580g0010 Nicotiana tabacum HOM05D008635 ORTHO05D285701 1.2e-13 81.6 44 86.4
Peaxi162Scf00468g00025 Petunia axillaris HOM05D000045 ORTHO05D002701 2.0e-13 80.9 135 31.9
CAN.G770.3 Capsicum annuum HOM05D004033 ORTHO05D002701 2.6e-13 80.5 133 33.8
Nitab4.5_0008840g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.5e-13 79.7 155 32.9
CAN.G92.6 Capsicum annuum HOM05D004033 ORTHO05D002701 5.8e-13 79.3 70 50.0
Nitab4.5_0001586g0250 Nicotiana tabacum HOM05D001295 ORTHO05D005319 5.8e-13 79.3 49 75.5
Nitab4.5_0002766g0070 Nicotiana tabacum HOM05D008635 ORTHO05D285952 5.8e-13 79.3 48 75.0
Peaxi162Scf01364g00002 Petunia axillaris HOM05D004033 ORTHO05D002701 5.8e-13 79.3 76 42.1
Nitab4.5_0000585g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.0e-12 78.6 97 54.6
Nitab4.5_0000836g0040 Nicotiana tabacum HOM05D008635 ORTHO05D286008 1.7e-12 77.8 50 78.0
Nitab4.5_0005719g0080 Nicotiana tabacum HOM05D008635 ORTHO05D286794 1.7e-12 77.8 47 83.0
Nitab4.5_0005851g0080 Nicotiana tabacum HOM05D008635 ORTHO05D282250 1.7e-12 77.8 48 77.1
Nitab4.5_0000381g0100 Nicotiana tabacum HOM05D008635 ORTHO05D286047 2.2e-12 77.4 47 78.7
Nitab4.5_0004440g0060 Nicotiana tabacum HOM05D008635 ORTHO05D285709 2.2e-12 77.4 45 77.8
Nitab4.5_0012426g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.9e-12 77.0 140 51.4
Peaxi162Scf00378g00045 Petunia axillaris HOM05D004033 ORTHO05D002701 4.9e-12 76.3 54 63.0
Nitab4.5_0001306g0070 Nicotiana tabacum HOM05D008635 ORTHO05D282703 6.5e-12 75.9 44 75.0
Nitab4.5_0000391g0370 Nicotiana tabacum HOM05D008635 ORTHO05D005319 8.4e-12 75.5 47 74.5
CAN.G1094.23 Capsicum annuum HOM05D002080 ORTHO05D002062 1.1e-11 75.1 99 43.4
Nitab4.5_0000136g0230 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.1e-11 75.1 120 42.5
Nitab4.5_0000573g0010 Nicotiana tabacum HOM05D008635 ORTHO05D285949 1.1e-11 75.1 48 75.0
Nitab4.5_0008219g0010 Nicotiana tabacum HOM05D008635 ORTHO05D283961 1.9e-11 74.3 48 75.0
CAN.G490.39 Capsicum annuum HOM05D000045 ORTHO05D002701 2.5e-11 73.9 109 37.6
CAN.G1700.1 Capsicum annuum HOM05D004033 ORTHO05D002701 3.2e-11 73.6 122 36.9
Nitab4.5_0004219g0020 Nicotiana tabacum HOM05D000045 ORTHO05D002701 3.2e-11 73.6 273 26.0
Nitab4.5_0004580g0020 Nicotiana tabacum HOM05D008635 ORTHO05D283164 5.5e-11 72.8 41 80.5
Nitab4.5_0000246g0250 Nicotiana tabacum HOM05D008635 ORTHO05D282229 7.1e-11 72.4 48 70.8
Nitab4.5_0001246g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 9.3e-11 72.0 109 39.4
CAN.G479.43 Capsicum annuum HOM05D004033 ORTHO05D002701 3.5e-10 70.1 71 46.5
Prupe.8G014900 Prunus persica HOM05D000045 ORTHO05D000067 3.5e-10 70.1 165 30.9
CAN.G1100.5 Capsicum annuum HOM05D004033 ORTHO05D002701 6.0e-10 69.3 42 73.8
CAN.G739.5 Capsicum annuum HOM05D004033 ORTHO05D002701 6.0e-10 69.3 105 37.1
Nitab4.5_0007742g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.0e-10 69.3 109 38.5
Nitab4.5_0006237g0020 Nicotiana tabacum HOM05D008635 ORTHO05D283942 7.9e-10 68.9 45 75.6
CAN.G31.9 Capsicum annuum HOM05D004033 ORTHO05D002701 1.3e-09 68.2 94 36.2
Nitab4.5_0000149g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.3e-09 68.2 68 55.9
CAN.G27.46 Capsicum annuum HOM05D004033 ORTHO05D002701 2.3e-09 67.4 48 60.4
PSO384G3489 Papaver somniferum HOM05D000045 ORTHO05D000067 2.3e-09 67.4 149 28.9
Nitab4.5_0000092g0140 Nicotiana tabacum HOM05D000045 ORTHO05D002701 3.0e-09 67.0 43 74.4
Nitab4.5_0001955g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.0e-09 67.0 82 50.0
Nitab4.5_0002333g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.9e-09 66.6 197 28.4
TWI63G1556 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.9e-09 66.6 184 27.7
Nitab4.5_0003567g0020 Nicotiana tabacum HOM05D008635 ORTHO05D283202 6.7e-09 65.9 35 85.7
PSO384G1431 Papaver somniferum HOM05D000045 ORTHO05D000067 8.7e-09 65.5 147 29.3
Nitab4.5_0008408g0010 Nicotiana tabacum HOM05D008635 ORTHO05D286223 1.5e-08 64.7 34 85.3
ECA238G2966 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.9e-08 64.3 89 39.3
ECA240G0947 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.9e-08 64.3 138 32.6
TWI15G0461 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.5e-08 63.9 147 29.9
Nitab4.5_0000440g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.3e-08 63.5 206 30.1
PSO541G3849 Papaver somniferum HOM05D000045 ORTHO05D000067 3.3e-08 63.5 92 37.0
Nitab4.5_0000987g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.3e-08 63.2 121 32.2
TWI59G1103 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.3e-08 63.2 143 30.8
ECA240G2379 Erigeron canadensis HOM05D000045 ORTHO05D000067 5.7e-08 62.8 139 32.4
PSO675G1020 Papaver somniferum HOM05D000045 ORTHO05D000067 5.7e-08 62.8 141 33.3
CiPaw.01G111700 Carya illinoinensis HOM05D000045 ORTHO05D000067 7.4e-08 62.4 143 26.6
Nitab4.5_0000043g0140 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.4e-08 62.4 97 39.2
EL10Ac4g08272 Beta vulgaris HOM05D034629 ORTHO05D031654 1.3e-07 61.6 157 24.2
Nitab4.5_0001969g0100 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.6e-07 61.2 113 32.7
Nitab4.5_0003145g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.6e-07 61.2 45 68.9
Nitab4.5_0008386g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.6e-07 61.2 51 66.7
Nitab4.5_0000707g0320 Nicotiana tabacum HOM05D008635 ORTHO05D282798 2.1e-07 60.8 43 65.1
CiPaw.03G222600 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.7e-07 60.1 140 30.0
Nitab4.5_0013768g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.7e-07 60.1 51 64.7
Migut.A01062 Erythranthe guttata HOM05D000045 ORTHO05D000067 4.8e-07 59.7 137 32.1
PSO713G0011 Papaver somniferum HOM05D000045 ORTHO05D000067 6.3e-07 59.3 89 34.8
Nitab4.5_0005934g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.2e-07 58.9 51 64.7
PSO729G0100 Papaver somniferum HOM05D000045 ORTHO05D000067 8.2e-07 58.9 100 32.0
TWI14G0305 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 8.2e-07 58.9 164 29.3
PSO017G6224 Papaver somniferum HOM05D000045 ORTHO05D000067 1.1e-06 58.5 88 33.0
PSO210G4107 Papaver somniferum HOM05D000045 ORTHO05D000067 1.1e-06 58.5 87 29.9
Nitab4.5_0000391g0410 Nicotiana tabacum HOM05D008635 ORTHO05D284733 1.4e-06 58.2 36 72.2
PSO384G1298 Papaver somniferum HOM05D000045 ORTHO05D000067 1.4e-06 58.2 89 32.6
CiPaw.15G062800 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.4e-06 57.4 140 29.3
COL.COLO4_24061 Corchorus olitorius HOM05D000045 ORTHO05D000067 2.4e-06 57.4 81 33.3
PSO675G3740 Papaver somniferum HOM05D000045 ORTHO05D000067 2.4e-06 57.4 102 32.4
QL11p014222 Quercus lobata HOM05D000045 ORTHO05D000067 3.1e-06 57.0 89 32.6
Duzib114G0119 Durio zibethinus HOM05D000045 ORTHO05D000067 4.1e-06 56.6 85 29.4
TPR.G5180 Trifolium pratense HOM05D000045 ORTHO05D000067 6.9e-06 55.8 85 30.6
Ah.02g118340 Amaranthus hybridus HOM05D000045 ORTHO05D000067 9.0e-06 55.5 125 32.0
Ah.08g221470 Amaranthus hybridus HOM05D000045 ORTHO05D000067 9.0e-06 55.5 125 32.0
CAN.G98.5 Capsicum annuum HOM05D000045 ORTHO05D002701 9.0e-06 55.5 169 25.4
Nitab4.5_0008768g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 9.0e-06 55.5 98 33.7
PSO339G4192 Papaver somniferum HOM05D000045 ORTHO05D000067 9.0e-06 55.5 130 27.7
Peaxi162Scf01072g00311 Petunia axillaris HOM05D000045 ORTHO05D002701 9.0e-06 55.5 75 34.7


User provided reference genes

Program Settings