Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004094g0010 Nicotiana tabacum HOM05D005967 ORTHO05D005174 3.4e-80 301.6 153 100.0
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 1.7e-15 86.7 146 43.2
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 2.1e-13 79.7 81 53.1
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 1.4e-12 77.0 145 40.7
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 2.3e-12 76.3 119 40.3
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 3.1e-12 75.9 90 48.9
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.1e-12 75.9 73 57.5
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 4.0e-12 75.5 120 42.5
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 8.9e-12 74.3 81 50.6
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 8.9e-12 74.3 73 56.2
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 8.9e-12 74.3 114 42.1
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 1.2e-11 73.9 116 43.1
Peaxi162Scf00832g00006 Petunia axillaris HOM05D030065 ORTHO05D005174 2.0e-11 73.2 143 37.1
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.6e-11 72.8 113 40.7
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 7.6e-11 71.2 142 36.6
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 7.6e-11 71.2 112 39.3
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 1.3e-10 70.5 95 47.4
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 1.3e-10 70.5 81 50.6
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 2.2e-10 69.7 71 50.7
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 2.2e-10 69.7 85 44.7
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 3.8e-10 68.9 123 39.0
MD11G1110400 Malus domestica HOM05D005967 ORTHO05D005174 4.9e-10 68.6 124 43.5
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 4.9e-10 68.6 114 37.7
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 6.4e-10 68.2 89 42.7
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 8.4e-10 67.8 153 32.7
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 8.4e-10 67.8 69 50.7
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 8.4e-10 67.8 118 40.7
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 1.1e-09 67.4 110 41.8
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 1.4e-09 67.0 64 51.6
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 1.9e-09 66.6 79 50.6
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 1.9e-09 66.6 116 37.9
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 2.4e-09 66.2 97 43.3
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 7.1e-09 64.7 94 42.6
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 7.1e-09 64.7 146 34.9
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 7.1e-09 64.7 99 40.4
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 9.2e-09 64.3 107 40.2
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 1.6e-08 63.5 149 32.9
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 1.6e-08 63.5 72 50.0
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 2.7e-08 62.8 90 42.2
Sopen06g032470 Solanum pennellii HOM05D055359 ORTHO05D051046 3.5e-08 62.4 78 51.3
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 6.0e-08 61.6 145 36.6
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 6.0e-08 61.6 75 46.7
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 7.8e-08 61.2 72 44.4
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 1.3e-07 60.5 67 46.3
MD03G1095400 Malus domestica HOM05D005967 ORTHO05D005174 2.3e-07 59.7 159 35.2
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 2.3e-07 59.7 62 53.2
Oeu054156.1 Olea europaea HOM05D005967 ORTHO05D005174 3.0e-07 59.3 67 50.7
Solyc06g076060.1 Solanum lycopersicum HOM05D055359 ORTHO05D051046 3.0e-07 59.3 77 50.6
Prupe.6G078900 Prunus persica HOM05D005967 ORTHO05D005174 5.1e-07 58.5 120 35.8
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 6.6e-07 58.2 78 41.0
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 8.6e-07 57.8 86 38.4
Glyma.13G335500 Glycine max HOM05D005967 ORTHO05D005174 3.3e-06 55.8 67 49.3
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.3e-06 55.8 86 38.4
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 3.3e-06 55.8 71 49.3
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 4.3e-06 55.5 58 48.3
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 4.3e-06 55.5 64 43.8
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 5.6e-06 55.1 75 41.3
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 5.6e-06 55.1 71 39.4
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 5.6e-06 55.1 105 38.1
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 5.6e-06 55.1 151 31.1
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 7.3e-06 54.7 62 46.8
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 7.3e-06 54.7 74 41.9
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 7.3e-06 54.7 153 29.4


User provided reference genes

Program Settings