Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 2.2e-75 285.4 130 100.0
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 3.0e-69 265.0 120 98.3
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 1.5e-68 262.7 120 96.7
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 2.0e-68 262.3 120 97.5
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 2.0e-68 262.3 120 96.7
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 2.6e-68 261.9 120 95.8
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 3.3e-68 261.5 120 97.5
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 7.5e-68 260.4 120 96.7
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 4.1e-66 254.6 120 94.2
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 9.1e-66 253.4 120 94.2
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 3.5e-65 251.5 120 92.5
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 7.7e-65 250.4 120 92.5
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 1.0e-64 250.0 120 94.2
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 1.3e-64 249.6 120 91.7
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.7e-64 249.2 120 91.7
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 3.8e-64 248.1 120 90.0
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 5.0e-64 247.7 120 91.7
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 8.5e-64 246.9 120 90.8
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 8.5e-64 246.9 120 90.8
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 1.1e-63 246.5 120 90.0
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 1.1e-63 246.5 120 92.5
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 1.1e-63 246.5 120 92.5
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 1.1e-63 246.5 120 90.8
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 1.1e-63 246.5 120 90.8
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 1.5e-63 246.1 120 90.0
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 1.9e-63 245.7 120 89.2
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 1.9e-63 245.7 120 91.7
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 1.9e-63 245.7 120 90.0
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 1.9e-63 245.7 120 90.8
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 2.5e-63 245.4 120 92.5
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 2.5e-63 245.4 120 89.2
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 2.5e-63 245.4 120 90.8
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 3.2e-63 245.0 120 91.7
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 4.2e-63 244.6 120 89.2
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 4.2e-63 244.6 120 90.0
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 7.2e-63 243.8 120 88.3
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 7.2e-63 243.8 120 90.8
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 9.4e-63 243.4 120 90.8
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 9.4e-63 243.4 120 88.3
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 1.2e-62 243.0 120 90.0
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 1.2e-62 243.0 120 89.2
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 1.6e-62 242.7 120 90.0
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 1.6e-62 242.7 120 90.0
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 3.6e-62 241.5 120 88.3
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 6.1e-62 240.7 120 88.3
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 8.0e-62 240.4 120 89.2
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 8.0e-62 240.4 120 88.3
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.0e-61 240.0 120 88.3
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 1.0e-61 240.0 120 90.0
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 1.4e-61 239.6 120 87.5
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 1.8e-61 239.2 121 88.4
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 3.0e-61 238.4 120 86.7
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 3.0e-61 238.4 120 86.7
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 4.0e-61 238.0 120 85.8
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 4.0e-61 238.0 120 88.3
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 5.2e-61 237.7 120 86.7
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 5.2e-61 237.7 120 87.5
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 5.2e-61 237.7 120 86.7
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 1.5e-60 236.1 120 85.0
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 1.5e-60 236.1 131 81.7
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 2.0e-60 235.7 120 85.0
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 2.0e-60 235.7 136 80.9
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 2.6e-60 235.3 120 88.3
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 5.7e-60 234.2 136 78.7
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 7.5e-60 233.8 120 85.8
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 9.8e-60 233.4 120 86.7
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 1.7e-59 232.6 120 84.2
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 2.2e-59 232.3 120 86.7
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 2.8e-59 231.9 120 86.7
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 3.7e-59 231.5 124 84.7
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 4.8e-59 231.1 120 86.7
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 4.8e-59 231.1 120 85.8
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 3.1e-58 228.4 120 82.5
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 3.1e-58 228.4 120 85.8
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 3.1e-58 228.4 120 85.8
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 3.1e-58 228.4 120 85.8
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 5.4e-58 227.6 120 85.0
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 7.0e-58 227.3 120 82.5
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 7.0e-58 227.3 120 85.8
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 7.0e-58 227.3 120 85.8
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 7.0e-58 227.3 120 85.8
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 7.0e-58 227.3 120 85.8
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 7.0e-58 227.3 120 85.8
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 7.0e-58 227.3 120 85.8
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 7.0e-58 227.3 120 85.8
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 7.0e-58 227.3 120 85.8
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 7.0e-58 227.3 120 84.2
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 7.0e-58 227.3 120 85.8
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 2.0e-57 225.7 120 84.2
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 2.7e-57 225.3 120 85.0
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 3.5e-57 224.9 120 85.0
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 4.5e-57 224.6 120 85.0
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 7.7e-57 223.8 120 83.3
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 7.7e-57 223.8 120 83.3
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 1.0e-56 223.4 120 81.7
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 4.2e-55 218.0 120 78.3
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 7.2e-55 217.2 120 80.0
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 4.7e-54 214.5 120 80.8
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 4.9e-51 204.5 127 75.6
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 8.3e-51 203.8 133 72.2
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 1.4e-45 186.4 124 69.4
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 1.4e-45 186.4 121 70.2
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 2.9e-43 178.7 121 68.6
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 1.0e-40 170.2 82 91.5
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 5.0e-40 167.9 80 91.2
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 9.5e-39 163.7 120 62.5
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 2.2e-35 152.5 128 57.8
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 6.4e-35 151.0 127 63.0
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 5.2e-29 131.3 113 59.3
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.9e-23 112.8 51 92.2
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 2.5e-23 112.5 69 75.4
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 6.2e-22 107.8 50 92.0
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 2.3e-16 89.4 43 88.4
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 5.6e-15 84.7 53 71.7
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 8.1e-14 80.9 75 54.7
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 4.9e-11 71.6 31 96.8
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 1.0e-08 63.9 36 80.6


User provided reference genes

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