Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 2.9e-293 1011.1 496 100.0
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 1.7e-216 756.1 490 78.6
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 5.3e-215 751.1 491 78.0
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 1.2e-206 723.4 487 74.5
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 3.5e-206 721.8 492 74.4
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 2.5e-204 715.7 491 73.7
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 1.2e-203 713.4 486 74.1
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 4.7e-203 711.4 491 73.1
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 1.0e-202 710.3 492 73.4
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 6.7e-202 707.6 481 73.8
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 2.0e-201 706.1 483 73.1
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 4.4e-201 704.9 489 73.0
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 5.7e-201 704.5 492 72.6
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 4.8e-200 701.4 466 75.1
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 6.3e-200 701.0 441 77.6
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 8.2e-200 700.7 492 71.5
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 1.1e-199 700.3 491 71.7
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 3.1e-199 698.7 443 77.0
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 5.3e-199 698.0 481 72.6
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 9.1e-199 697.2 491 72.3
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 1.6e-198 696.4 465 74.0
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 2.0e-198 696.0 466 74.2
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 3.5e-198 695.3 485 72.6
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 3.5e-198 695.3 514 69.1
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 1.0e-197 693.7 477 73.0
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 1.3e-197 693.3 475 73.5
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 2.2e-197 692.6 468 73.7
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 2.9e-197 692.2 478 72.2
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 2.9e-197 692.2 485 71.5
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 3.8e-197 691.8 469 73.1
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 8.5e-197 690.6 474 72.6
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.5e-196 689.9 463 73.4
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 1.9e-196 689.5 484 71.3
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 1.9e-196 689.5 478 72.2
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 2.5e-196 689.1 493 70.8
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.5e-196 689.1 488 71.5
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 2.5e-196 689.1 485 70.9
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 4.2e-196 688.3 489 71.2
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 5.5e-196 688.0 481 71.9
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 1.2e-195 686.8 483 71.4
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 1.2e-195 686.8 461 74.2
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 2.1e-195 686.0 491 71.1
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 2.7e-195 685.6 488 71.3
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 8.0e-195 684.1 479 72.0
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 1.4e-194 683.3 475 71.4
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 1.8e-194 682.9 483 70.6
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 4.0e-194 681.8 471 72.2
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 5.2e-194 681.4 494 70.2
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 6.8e-194 681.0 431 81.2
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 8.8e-194 680.6 453 74.8
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 1.2e-193 680.2 502 68.7
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 1.5e-193 679.9 492 69.7
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 2.6e-193 679.1 458 73.1
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 2.6e-193 679.1 484 70.2
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 5.7e-193 677.9 492 69.1
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 5.7e-193 677.9 493 69.0
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 5.7e-193 677.9 510 68.0
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 7.5e-193 677.6 491 70.3
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 1.7e-192 676.4 457 73.5
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 2.2e-192 676.0 492 69.3
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 2.8e-192 675.6 460 73.7
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 4.8e-192 674.9 492 68.9
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.4e-191 673.3 493 68.6
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 3.1e-191 672.2 454 72.7
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 5.4e-191 671.4 482 69.7
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 4.5e-190 668.3 473 71.2
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 1.0e-189 667.2 472 69.7
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 1.3e-189 666.8 483 69.2
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.3e-189 666.8 474 69.8
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.7e-189 666.4 462 71.2
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 2.2e-189 666.0 462 71.0
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 1.5e-188 663.3 462 71.4
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 5.5e-188 661.4 464 70.9
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 7.2e-188 661.0 466 70.0
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 9.5e-188 660.6 472 69.3
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 9.5e-188 660.6 456 71.5
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 4.0e-186 655.2 468 71.2
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 6.8e-186 654.4 490 66.9
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 4.1e-183 645.2 412 80.6
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 7.0e-183 644.4 464 69.2
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 9.2e-183 644.0 457 69.6
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 2.9e-181 639.0 478 66.5
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 4.7e-179 631.7 458 68.1
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 3.0e-178 629.0 460 68.9
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 6.8e-178 627.9 431 72.9
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 8.9e-178 627.5 476 68.3
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 4.4e-177 625.2 541 61.6
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 1.3e-176 623.6 473 65.1
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.3e-173 612.8 465 67.3
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 3.3e-172 609.0 582 57.2
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 7.3e-172 607.8 454 65.4
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 4.6e-166 588.6 432 69.9
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 2.8e-163 579.3 417 71.0
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.1e-159 567.4 451 68.1
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 2.4e-159 566.2 488 61.9
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 1.1e-154 550.8 417 67.1
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 4.4e-153 545.4 456 60.5
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 4.1e-151 538.9 439 64.0
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 9.2e-151 537.7 387 70.3
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 1.4e-143 513.8 452 57.1
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 2.1e-139 500.0 457 55.8
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 3.1e-138 496.1 524 55.3
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 6.9e-138 495.0 407 63.6
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 3.5e-118 429.5 297 73.4
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 3.3e-116 422.9 297 72.7
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 2.1e-115 420.2 271 76.4
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 2.5e-108 396.7 405 51.6
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 2.5e-103 380.2 259 73.7
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 4.1e-74 283.1 146 93.2
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.7e-59 234.6 146 73.3
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 1.1e-55 221.9 220 55.5
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 7.1e-42 176.0 99 78.8
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 5.8e-28 129.8 81 71.6
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 4.6e-25 120.2 80 73.8
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.7e-11 75.1 43 81.4
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 3.8e-11 73.9 42 81.0
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 6.4e-11 73.2 42 78.6
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 2.7e-09 67.8 34 94.1
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 5.1e-08 63.5 40 77.5
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 1.5e-07 62.0 46 65.2


User provided reference genes

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