Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003242g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 1.8e-117 426.0 223 100.0
Nitab4.5_0002721g0060 Nicotiana tabacum HOM05D004189 ORTHO05D004092 3.2e-87 325.5 242 79.3
Peaxi162Scf00234g00811 Petunia axillaris HOM05D004189 ORTHO05D004092 4.4e-52 208.8 208 64.9
Sopen01g005170 Solanum pennellii HOM05D000155 ORTHO05D000022 2.3e-40 169.9 203 54.2
CAN.G166.11 Capsicum annuum HOM05D004189 ORTHO05D004092 6.6e-40 168.3 218 54.1
Solyc01g009660.3 Solanum lycopersicum HOM05D004189 ORTHO05D004092 2.0e-36 156.8 202 52.0
Nitab4.5_0000716g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 1.3e-30 137.5 372 32.8
Nitab4.5_0009681g0010 Nicotiana tabacum HOM05D004189 ORTHO05D004092 2.6e-28 129.8 373 32.2
PGSC0003DMG400014293 Solanum tuberosum HOM05D004189 ORTHO05D004092 5.8e-28 128.6 361 31.9
CAN.G490.32 Capsicum annuum HOM05D004189 ORTHO05D004092 7.1e-26 121.7 373 31.4
Solyc03g025810.4 Solanum lycopersicum HOM05D004189 ORTHO05D004092 1.0e-24 117.9 349 31.8
Peaxi162Scf00444g00847 Petunia axillaris HOM05D004189 ORTHO05D004092 8.7e-24 114.8 380 28.9
Sopen03g004620 Solanum pennellii HOM05D004189 ORTHO05D004092 1.4e-21 107.5 359 29.8
Cc03_g07610 Coffea canephora HOM05D004189 ORTHO05D004092 3.4e-20 102.8 332 30.1
PGSC0003DMG400030008 Solanum tuberosum HOM05D004189 ORTHO05D004092 5.8e-20 102.1 149 49.7
TAR374G0772 Trochodendron aralioides HOM05D004189 ORTHO05D004092 1.0e-16 91.3 307 29.0
Sc19g0001510 Simmondsia chinensis HOM05D004189 ORTHO05D004092 1.9e-15 87.0 130 49.2
TWI23G0464 Tripterygium wilfordii HOM05D004189 ORTHO05D004092 2.5e-15 86.7 162 39.5
Manes.06G147200 Manihot esculenta HOM05D004189 ORTHO05D004092 3.3e-15 86.3 310 29.4
Gohir.A12G257800 Gossypium hirsutum HOM05D004189 ORTHO05D004092 5.6e-15 85.5 338 27.5
Gohir.D12G259100 Gossypium hirsutum HOM05D004189 ORTHO05D004092 2.8e-14 83.2 334 27.8
Gorai.008G277500 Gossypium raimondii HOM05D004189 ORTHO05D004092 3.7e-14 82.8 334 27.2
Cpa.g.sc107.53 Carica papaya HOM05D004189 ORTHO05D004092 1.1e-13 81.3 108 47.2
Actinidia34113 Actinidia chinensis HOM05D004189 ORTHO05D004092 2.4e-13 80.1 172 41.3
Oeu024223.1 Olea europaea HOM05D004189 ORTHO05D004092 5.3e-13 79.0 125 43.2
EL10Ac3g05642 Beta vulgaris HOM05D004189 ORTHO05D004092 6.9e-13 78.6 149 40.3
Cfa008320 Carpinus fangiana HOM05D004189 ORTHO05D004092 6.9e-13 78.6 129 44.2
vmacro06681 Vaccinium macrocarpon HOM05D004189 ORTHO05D004092 2.0e-12 77.0 131 42.7
Eucgr.A02790 Eucalyptus grandis HOM05D004189 ORTHO05D004092 2.6e-12 76.6 210 35.7
PSO478G0985 Papaver somniferum HOM05D004189 ORTHO05D004092 2.6e-12 76.6 117 44.4
AUR62021191 Chenopodium quinoa HOM05D004189 ORTHO05D004092 4.5e-12 75.9 134 43.3
PSO782G0005 Papaver somniferum HOM05D004189 ORTHO05D004092 4.5e-12 75.9 117 44.4
Duzib205G0656 Durio zibethinus HOM05D004189 ORTHO05D004092 7.6e-12 75.1 142 42.3
Oeu056256.2 Olea europaea HOM05D004189 ORTHO05D004092 7.6e-12 75.1 127 40.9
Thecc.03G176700 Theobroma cacao HOM05D004189 ORTHO05D004092 1.0e-11 74.7 114 43.0
DCAR_018199 Daucus carota HOM05D004189 ORTHO05D004092 1.3e-11 74.3 140 39.3
Sabra15G0153700 Salix brachista HOM05D004189 ORTHO05D004092 1.7e-11 73.9 351 25.6
ClCG09G012920 Citrullus lanatus HOM05D004189 ORTHO05D004092 3.8e-11 72.8 241 30.3
PGR042G0303 Punica granatum HOM05D004189 ORTHO05D004092 6.5e-11 72.0 135 41.5
VMungo0720G0841 Vigna mungo HOM05D004189 ORTHO05D004092 6.5e-11 72.0 125 41.6
Ca_25745_v3 Cicer arietinum L. HOM05D004189 ORTHO05D004092 1.1e-10 71.2 156 39.1
arahy.Tifrunner.gnm1.ann1.4R9DEN Arachis hypogaea HOM05D001888 ORTHO05D001842 1.4e-10 70.9 169 37.9
AUR62015982 Chenopodium quinoa HOM05D004189 ORTHO05D004092 2.5e-10 70.1 262 29.4
Aqoxy7G00356 Aquilegia oxysepala HOM05D004189 ORTHO05D004092 4.2e-10 69.3 181 36.5
CANSAT21G0725 Cannabis sativa HOM05D004189 ORTHO05D004092 4.2e-10 69.3 183 33.9
Ciclev10004574m.g Citrus clementina HOM05D004189 ORTHO05D004092 4.2e-10 69.3 143 40.6
Prupe.2G294400 Prunus persica HOM05D004189 ORTHO05D004092 4.2e-10 69.3 117 45.3
SGA_v2.0_scaffold60G21043 Striga asiatica HOM05D004189 ORTHO05D004092 5.5e-10 68.9 169 33.1
Ah.07g207200 Amaranthus hybridus HOM05D032681 ORTHO05D004092 7.1e-10 68.6 155 38.7
Potri.012G141300 Populus trichocarpa HOM05D004189 ORTHO05D004092 7.1e-10 68.6 384 25.0
CANSAT21G0752 Cannabis sativa HOM05D004189 ORTHO05D004092 1.6e-09 67.4 206 32.5
TPR.G14322 Trifolium pratense HOM05D004189 ORTHO05D004092 2.1e-09 67.0 164 36.0
arahy.Tifrunner.gnm1.ann1.06RI6S Arachis hypogaea HOM05D004189 ORTHO05D004092 2.7e-09 66.6 168 37.5
MELO3C003321.2 Cucumis melo HOM05D004189 ORTHO05D004092 2.7e-09 66.6 268 29.5
Thhalv10013021m.g Eutrema salsugineum HOM05D004189 ORTHO05D004092 4.6e-09 65.9 155 40.6
MD01G1201000 Malus domestica HOM05D004189 ORTHO05D004092 4.6e-09 65.9 181 36.5
Migut.F00339 Erythranthe guttata HOM05D004189 ORTHO05D004092 1.0e-08 64.7 115 45.2
Lsat_1_v5_gn_2_132020 Lactuca sativa HOM05D004189 ORTHO05D004092 1.3e-08 64.3 174 32.8
BraA03t14684Z Brassica rapa HOM05D004189 ORTHO05D004092 1.8e-08 63.9 157 36.9
COL.COLO4_14310 Corchorus olitorius HOM05D004189 ORTHO05D004092 2.3e-08 63.5 79 51.9
Glyma.10G236000 Glycine max HOM05D004189 ORTHO05D004092 3.0e-08 63.2 187 32.1
Potri.015G143950 Populus trichocarpa HOM05D004189 ORTHO05D004092 3.0e-08 63.2 121 38.8
QL09p014192 Quercus lobata HOM05D004189 ORTHO05D004092 3.0e-08 63.2 184 32.6
BcaC03g14545 Brassica carinata HOM05D004189 ORTHO05D004092 3.9e-08 62.8 203 33.5
A03p56110 Brassica napus HOM05D004189 ORTHO05D004092 3.9e-08 62.8 157 36.9
C07p54440 Brassica napus HOM05D004189 ORTHO05D004092 5.1e-08 62.4 157 37.6
Medtr1g100627 Medicago truncatula HOM05D004189 ORTHO05D004092 5.1e-08 62.4 170 34.1
THA.LOC104811978 Tarenaya hassleriana HOM05D004189 ORTHO05D004092 5.1e-08 62.4 148 36.5
Phvul.007G069800 Phaseolus vulgaris HOM05D004189 ORTHO05D004092 6.7e-08 62.0 175 30.9
BolC7t45929H Brassica oleracea HOM05D004189 ORTHO05D004092 1.1e-07 61.2 157 36.9
ECA238G1803 Erigeron canadensis HOM05D004189 ORTHO05D004092 1.1e-07 61.2 175 31.4
Lalb_Chr19g0130831 Lupinus albus HOM05D004189 ORTHO05D004092 1.1e-07 61.2 144 32.6
Medtr1g100623 Medicago truncatula HOM05D004189 ORTHO05D004092 1.1e-07 61.2 121 35.5
AL7G27520 Arabidopsis lyrata HOM05D004189 ORTHO05D004092 1.5e-07 60.8 138 40.6
CiPaw.03G106300 Carya illinoinensis HOM05D004189 ORTHO05D004092 1.5e-07 60.8 89 40.4
AT5G52300 Arabidopsis thaliana HOM05D004189 ORTHO05D004092 1.9e-07 60.5 126 40.5
Carub.0008s1240 Capsella rubella HOM05D004189 ORTHO05D004092 1.9e-07 60.5 183 35.0
Glyma.20G158500 Glycine max HOM05D004189 ORTHO05D004092 1.9e-07 60.5 191 33.0
Medtr6g045273 Medicago truncatula HOM05D004189 ORTHO05D004092 1.9e-07 60.5 151 37.1
SalBow4G1950 Salvia bowleyana HOM05D026728 ORTHO05D004092 1.9e-07 60.5 222 30.2
BcaC06g32799 Brassica carinata HOM05D004189 ORTHO05D004092 3.3e-07 59.7 157 35.0
Nn6g33499 Nelumbo nucifera HOM05D004189 ORTHO05D004092 4.3e-07 59.3 360 24.4
SalBow4G1418 Salvia bowleyana HOM05D026728 ORTHO05D004092 4.3e-07 59.3 222 29.7
SGA_v2.0_scaffold10G05341 Striga asiatica HOM05D026728 ORTHO05D004092 4.3e-07 59.3 184 28.8
TPR.G10757 Trifolium pratense HOM05D004189 ORTHO05D004092 4.3e-07 59.3 142 36.6
C02p19900 Brassica napus HOM05D004189 ORTHO05D004092 5.7e-07 58.9 203 33.0
BolC2t08123H Brassica oleracea HOM05D004189 ORTHO05D004092 5.7e-07 58.9 203 33.0
Thhalv10024860m.g Eutrema salsugineum HOM05D004189 ORTHO05D004092 5.7e-07 58.9 190 35.8
Lj5g0019959 Lotus japonicus HOM05D004189 ORTHO05D004092 5.7e-07 58.9 155 33.5
BcaB05g21946 Brassica carinata HOM05D004189 ORTHO05D004092 7.4e-07 58.5 203 34.0
Psat6g199400 Pisum sativum HOM05D004189 ORTHO05D004092 7.4e-07 58.5 180 30.0
Rhsim03G0180900 Rhododendron simsii HOM05D004189 ORTHO05D004092 7.4e-07 58.5 102 43.1
A02p11900 Brassica napus HOM05D004189 ORTHO05D004092 9.6e-07 58.2 207 31.4
QL09p014207 Quercus lobata HOM05D004189 ORTHO05D004092 1.3e-06 57.8 184 30.4
RcHm_v2.0_Chr1g0377291 Rosa chinensis HOM05D013146 ORTHO05D004092 1.3e-06 57.8 127 39.4
CsaV3_3G049950 Cucumis sativus L. HOM05D004189 ORTHO05D004092 1.6e-06 57.4 128 32.8
Lj2g0010006 Lotus japonicus HOM05D004189 ORTHO05D004092 1.6e-06 57.4 152 34.2
CSS0002108 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 2.8e-06 56.6 110 42.7
CSS0007027 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 2.8e-06 56.6 110 42.7
Migut.F01119 Erythranthe guttata HOM05D004189 ORTHO05D004092 2.8e-06 56.6 125 37.6
Sp7g23610 Schrenkiella parvula HOM05D004189 ORTHO05D004092 2.8e-06 56.6 239 32.6
AL8G26690 Arabidopsis lyrata HOM05D004189 ORTHO05D004092 4.8e-06 55.8 177 34.5
Dinv28441 Davidia involucrata HOM05D004189 ORTHO05D004092 4.8e-06 55.8 136 36.8
FAN01G1221 Fragaria x ananassa HOM05D013146 ORTHO05D004092 4.8e-06 55.8 75 38.7
FAN03G0039 Fragaria x ananassa HOM05D013146 ORTHO05D004092 4.8e-06 55.8 116 42.2
Haze_13708 Corylus avellana HOM05D004189 ORTHO05D004092 6.3e-06 55.5 207 30.0
MD07G1268800 Malus domestica HOM05D004189 ORTHO05D004092 6.3e-06 55.5 117 41.0
Hund11746 Selenicereus undatus HOM05D004189 ORTHO05D004092 6.3e-06 55.5 203 29.6


User provided reference genes

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