Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003185g0070 Nicotiana tabacum HOM05D005430 ORTHO05D007814 1.2e-45 186.0 89 100.0
Nitab4.5_0008614g0010 Nicotiana tabacum HOM05D005430 ORTHO05D007814 3.3e-43 177.9 86 96.5
PGSC0003DMG400016877 Solanum tuberosum HOM05D005430 ORTHO05D007814 1.1e-33 146.4 93 78.5
CAN.G706.30 Capsicum annuum HOM05D005430 ORTHO05D007814 1.4e-33 146.0 91 81.3
Solyc12g098110.1 Solanum lycopersicum HOM05D005430 ORTHO05D007814 5.9e-32 140.6 94 75.5
Sopen12g032930 Solanum pennellii HOM05D005430 ORTHO05D007814 8.5e-31 136.7 94 72.3
CAN.G1745.2 Capsicum annuum HOM05D005430 ORTHO05D007814 2.3e-28 128.6 87 69.0
Solyc09g091360.1 Solanum lycopersicum HOM05D005430 ORTHO05D007814 3.7e-26 121.3 82 69.5
Oeu041168.1 Olea europaea HOM05D005430 ORTHO05D007814 1.5e-22 109.4 77 70.1
Prupe.1G058400 Prunus persica HOM05D005430 ORTHO05D007814 1.5e-22 109.4 86 58.1
vmacro22822 Vaccinium macrocarpon HOM05D005430 ORTHO05D007814 4.2e-22 107.8 88 60.2
CSS0041852 Camellia sinensis var. sinensis HOM05D005430 ORTHO05D007814 7.2e-22 107.1 88 60.2
Migut.N00331 Erythranthe guttata HOM05D005430 ORTHO05D007814 2.1e-21 105.5 82 63.4
RcHm_v2.0_Chr4g0396841 Rosa chinensis HOM05D005430 ORTHO05D007814 2.7e-21 105.1 86 58.1
Actinidia25081 Actinidia chinensis HOM05D005430 ORTHO05D007814 8.0e-21 103.6 87 62.1
Sabra03G0128400 Salix brachista HOM05D005430 ORTHO05D007814 8.0e-21 103.6 86 57.0
Duzib212G0862 Durio zibethinus HOM05D005430 ORTHO05D007814 3.0e-20 101.7 86 54.7
MD16G1234100 Malus domestica HOM05D005430 ORTHO05D007814 5.2e-20 100.9 81 55.6
FvH4_4g05670 Fragaria vesca HOM05D005430 ORTHO05D007814 6.8e-20 100.5 84 57.1
FAN17G1087 Fragaria x ananassa HOM05D005430 ORTHO05D007814 6.8e-20 100.5 84 54.8
Thecc.04G212700 Theobroma cacao HOM05D005430 ORTHO05D007814 1.5e-19 99.4 86 53.5
Potri.003G175200 Populus trichocarpa HOM05D005430 ORTHO05D007814 3.4e-19 98.2 86 54.7
Gohir.A10G120900 Gossypium hirsutum HOM05D005430 ORTHO05D007814 4.4e-19 97.8 86 53.5
Gohir.D10G145400 Gossypium hirsutum HOM05D005430 ORTHO05D007814 4.4e-19 97.8 86 53.5
Gorai.011G162600 Gossypium raimondii HOM05D005430 ORTHO05D007814 4.4e-19 97.8 86 53.5
FAN12G0934 Fragaria x ananassa HOM05D005430 ORTHO05D007814 5.7e-19 97.4 84 56.0
MD13G1228600 Malus domestica HOM05D005430 ORTHO05D007814 9.8e-19 96.7 81 56.8
Ciclev10006174m.g Citrus clementina HOM05D005430 ORTHO05D007814 1.7e-18 95.9 86 52.3
COL.COLO4_34091 Corchorus olitorius HOM05D005430 ORTHO05D007814 1.7e-18 95.9 67 61.2
MELO3C006342.2 Cucumis melo HOM05D005430 ORTHO05D007814 2.2e-18 95.5 90 54.4
Oeu033089.1 Olea europaea HOM05D005430 ORTHO05D007814 2.2e-18 95.5 86 55.8
Sed0020493 Sechium edule HOM05D005430 ORTHO05D007814 2.2e-18 95.5 89 53.9
Sed0023963 Sechium edule HOM05D005430 ORTHO05D007814 2.2e-18 95.5 84 57.1
Potri.001G053100 Populus trichocarpa HOM05D005430 ORTHO05D007814 2.8e-18 95.1 86 53.5
Nitab4.5_0000281g0030 Nicotiana tabacum HOM05D005430 ORTHO05D007814 1.1e-17 93.2 58 75.9
Cpa.g.sc59.85 Carica papaya HOM05D005430 ORTHO05D007814 1.4e-17 92.8 85 51.8
Manes.03G153100 Manihot esculenta HOM05D005430 ORTHO05D007814 1.4e-17 92.8 87 56.3
Atru.chr4.1803 Acer truncatum HOM05D005430 ORTHO05D007814 1.8e-17 92.4 82 59.8
Sed0021677 Sechium edule HOM05D005430 ORTHO05D007814 1.8e-17 92.4 89 53.9
Haze_11548 Corylus avellana HOM05D005430 ORTHO05D007814 2.4e-17 92.0 90 52.2
MELO3C023093.2 Cucumis melo HOM05D005430 ORTHO05D007814 4.1e-17 91.3 88 51.1
Hma1.2p1_0903F.1_g235070 Hydrangea macrophylla HOM05D005430 ORTHO05D007814 4.1e-17 91.3 86 52.3
Sabra01G0037500 Salix brachista HOM05D006492 ORTHO05D008432 4.1e-17 91.3 78 55.1
Eucgr.H00103 Eucalyptus grandis HOM05D005430 ORTHO05D007814 9.1e-17 90.1 83 55.4
FAN07G2372 Fragaria x ananassa HOM05D005430 ORTHO05D007814 9.1e-17 90.1 65 58.5
CsaV3_3G011340 Cucumis sativus L. HOM05D005430 ORTHO05D007814 1.2e-16 89.7 62 71.0
HanXRQChr07g0185851 Helianthus annuus HOM05D005430 ORTHO05D007814 1.2e-16 89.7 82 48.8
Cfa014874 Carpinus fangiana HOM05D005430 ORTHO05D007814 2.7e-16 88.6 78 52.6
FAN22G2342 Fragaria x ananassa HOM05D005430 ORTHO05D007814 5.9e-16 87.4 65 56.9
Sed0027066 Sechium edule HOM05D005430 ORTHO05D007814 5.9e-16 87.4 82 51.2
TWI73G0050 Tripterygium wilfordii HOM05D005430 ORTHO05D007814 5.9e-16 87.4 81 55.6
CsaV3_2G012000 Cucumis sativus L. HOM05D005430 ORTHO05D007814 7.7e-16 87.0 58 65.5
ClCG05G003630 Citrullus lanatus HOM05D005430 ORTHO05D007814 1.3e-15 86.3 57 71.9
SalBow3G0850 Salvia bowleyana HOM05D005430 ORTHO05D007814 1.3e-15 86.3 58 67.2
GSVIVG01029041001 Vitis vinifera HOM05D005430 ORTHO05D007814 2.3e-15 85.5 86 47.7
QL12p006673 Quercus lobata HOM05D005430 ORTHO05D007814 5.0e-15 84.3 83 45.8
Dinv38286 Davidia involucrata HOM05D005430 ORTHO05D007814 6.6e-15 84.0 56 71.4
QL06p023021 Quercus lobata HOM05D005430 ORTHO05D007814 6.6e-15 84.0 65 55.4
QL11p023894 Quercus lobata HOM05D005430 ORTHO05D007814 6.6e-15 84.0 65 55.4
CiPaw.01G204600 Carya illinoinensis HOM05D005430 ORTHO05D007814 8.6e-15 83.6 57 63.2
Lalb_Chr15g0088741 Lupinus albus HOM05D005430 ORTHO05D007814 8.6e-15 83.6 80 50.0
CANSAT78G1772 Cannabis sativa HOM05D005430 ORTHO05D007814 1.5e-14 82.8 81 49.4
CANSAT78G2053 Cannabis sativa HOM05D005430 ORTHO05D007814 1.5e-14 82.8 81 49.4
Manes.15G049100 Manihot esculenta HOM05D005430 ORTHO05D007814 1.9e-14 82.4 86 47.7
SGA_v2.0_scaffold2G00855 Striga asiatica HOM05D005430 ORTHO05D007814 1.9e-14 82.4 50 72.0
Lsat_1_v5_gn_6_62741 Lactuca sativa HOM05D005430 ORTHO05D007814 2.5e-14 82.0 59 59.3
THA.LOC104821619 Tarenaya hassleriana HOM05D005430 ORTHO05D007814 2.5e-14 82.0 85 48.2
QL05p063717 Quercus lobata HOM05D005430 ORTHO05D007814 3.3e-14 81.6 57 59.6
QL05p063758 Quercus lobata HOM05D005430 ORTHO05D007814 3.3e-14 81.6 57 59.6
Rhsim06G0013100 Rhododendron simsii HOM05D005430 ORTHO05D007814 5.5e-14 80.9 64 57.8
HanXRQChr02g0059521 Helianthus annuus HOM05D005430 ORTHO05D007814 7.2e-14 80.5 85 43.5
Sc13g0002820 Simmondsia chinensis HOM05D005430 ORTHO05D007814 2.8e-13 78.6 66 53.0
arahy.Tifrunner.gnm1.ann1.D09HZI Arachis hypogaea HOM05D005430 ORTHO05D007814 6.1e-13 77.4 75 50.7
Medtr2g030100 Medicago truncatula HOM05D005430 ORTHO05D007814 6.1e-13 77.4 79 48.1
Psat1g167840 Pisum sativum HOM05D005430 ORTHO05D007814 6.1e-13 77.4 79 44.3
Sp3g21900 Schrenkiella parvula HOM05D005430 ORTHO05D007814 1.0e-12 76.6 75 49.3
VMungo0540G1768 Vigna mungo HOM05D005430 ORTHO05D007814 1.0e-12 76.6 55 60.0
AL3G39310 Arabidopsis lyrata HOM05D005430 ORTHO05D007814 1.4e-12 76.3 77 46.8
BcaB04g20397 Brassica carinata HOM05D005430 ORTHO05D007814 1.4e-12 76.3 77 48.1
A01p31010 Brassica napus HOM05D005430 ORTHO05D007814 1.8e-12 75.9 77 46.8
C01p39510 Brassica napus HOM05D005430 ORTHO05D007814 1.8e-12 75.9 77 46.8
BolC1t03901H Brassica oleracea HOM05D005430 ORTHO05D007814 1.8e-12 75.9 77 46.8
BraA01t03227Z Brassica rapa HOM05D005430 ORTHO05D007814 1.8e-12 75.9 77 46.8
Phvul.006G128700 Phaseolus vulgaris HOM05D005430 ORTHO05D007814 1.8e-12 75.9 53 60.4
Medtr2g030080 Medicago truncatula HOM05D005430 ORTHO05D007814 3.0e-12 75.1 81 45.7
CARHR100160 Cardamine hirsuta HOM05D005430 ORTHO05D007814 4.0e-12 74.7 79 44.3
TPR.G26323 Trifolium pratense HOM05D005430 ORTHO05D007814 4.0e-12 74.7 81 45.7
TPR.G26356 Trifolium pratense HOM05D005430 ORTHO05D007814 5.2e-12 74.3 79 45.6
Glyma.09G023500 Glycine max HOM05D005430 ORTHO05D007814 6.8e-12 73.9 55 56.4
Glyma.15G129600 Glycine max HOM05D005430 ORTHO05D007814 6.8e-12 73.9 55 56.4
AT3G24060 Arabidopsis thaliana HOM05D005430 ORTHO05D007814 8.9e-12 73.6 77 44.2
AL8G20530 Arabidopsis lyrata HOM05D005430 ORTHO05D007814 1.5e-11 72.8 52 61.5
Thhalv10003022m.g Eutrema salsugineum HOM05D005430 ORTHO05D007814 2.0e-11 72.4 78 48.7
EL10Ac3g06777 Beta vulgaris HOM05D005430 ORTHO05D007814 9.8e-11 70.1 51 60.8
Carub.0003s2446 Capsella rubella HOM05D005430 ORTHO05D007814 4.9e-10 67.8 49 59.2
SHI00018 Sapria himalayana HOM05D005430 ORTHO05D007814 6.3e-10 67.4 55 52.7


User provided reference genes

Program Settings