Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003178g0050 Nicotiana tabacum HOM05D007964 ORTHO05D010090 6.9e-65 250.4 116 100.0
Nitab4.5_0003443g0080 Nicotiana tabacum HOM05D007964 ORTHO05D010090 7.1e-62 240.4 116 94.0
CAN.G1183.20 Capsicum annuum HOM05D007964 ORTHO05D010090 5.0e-47 191.0 102 85.3
PGSC0003DMG400025075 Solanum tuberosum HOM05D007964 ORTHO05D010090 8.5e-47 190.3 133 71.4
Peaxi162Scf00360g00092 Petunia axillaris HOM05D007964 ORTHO05D010090 4.6e-45 184.5 134 68.7
Sopen04g028110 Solanum pennellii HOM05D007964 ORTHO05D010090 1.4e-41 172.9 99 79.8
Oeu046067.1 Olea europaea HOM05D007964 ORTHO05D010090 3.8e-31 138.3 98 70.4
SGA_v2.0_scaffold54G19690 Striga asiatica HOM05D007964 ORTHO05D010090 8.0e-29 130.6 95 61.1
Migut.O00757 Erythranthe guttata HOM05D007964 ORTHO05D010090 3.3e-27 125.2 97 56.7
CSS0006430 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 7.4e-27 124.0 100 63.0
CSS0037867 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 7.4e-27 124.0 100 63.0
Migut.N02947 Erythranthe guttata HOM05D007964 ORTHO05D010090 7.4e-27 124.0 97 56.7
Hma1.2p1_0678F.1_g202130 Hydrangea macrophylla HOM05D007964 ORTHO05D010090 2.2e-26 122.5 123 52.8
DCAR_001195 Daucus carota HOM05D007964 ORTHO05D010090 8.2e-26 120.6 95 63.2
Potri.005G198200 Populus trichocarpa HOM05D007964 ORTHO05D010090 1.3e-23 113.2 104 57.7
SalBow6G4546 Salvia bowleyana HOM05D007964 ORTHO05D010090 2.2e-23 112.5 99 58.6
Sabra05G0151100 Salix brachista HOM05D007964 ORTHO05D010090 6.5e-23 110.9 104 56.7
Lsat_1_v5_gn_6_100061 Lactuca sativa HOM05D007964 ORTHO05D010090 2.5e-22 109.0 97 54.6
QL02p037092 Quercus lobata HOM05D007964 ORTHO05D010090 2.5e-22 109.0 102 57.8
Rhsim06G0092800 Rhododendron simsii HOM05D007964 ORTHO05D010090 1.2e-21 106.7 100 53.0
QL02p036563 Quercus lobata HOM05D007964 ORTHO05D010090 1.6e-21 106.3 102 56.9
Ciclev10003908m.g Citrus clementina HOM05D007964 ORTHO05D010090 2.1e-21 105.9 104 54.8
MELO3C019968.2 Cucumis melo HOM05D007964 ORTHO05D010090 2.1e-21 105.9 107 50.5
CiPaw.15G011700 Carya illinoinensis HOM05D007964 ORTHO05D010090 3.6e-21 105.1 97 56.7
CsaV3_6G004920 Cucumis sativus L. HOM05D007964 ORTHO05D010090 8.0e-21 104.0 107 49.5
Glyma.02G078400 Glycine max HOM05D007964 ORTHO05D010090 8.0e-21 104.0 131 45.0
Atru.chr13.1988 Acer truncatum HOM05D007964 ORTHO05D010090 1.8e-20 102.8 109 48.6
ClCG08G007250 Citrullus lanatus HOM05D007964 ORTHO05D010090 1.8e-20 102.8 111 45.0
Cfa018267 Carpinus fangiana HOM05D007964 ORTHO05D010090 5.2e-20 101.3 108 53.7
Thecc.08G162400 Theobroma cacao HOM05D007964 ORTHO05D010090 5.2e-20 101.3 101 49.5
Haze_17821 Corylus avellana HOM05D007964 ORTHO05D010090 8.8e-20 100.5 105 53.3
Manes.02G184300 Manihot esculenta HOM05D007964 ORTHO05D010090 1.2e-19 100.1 107 52.3
Phvul.004G087600 Phaseolus vulgaris HOM05D007964 ORTHO05D010090 1.2e-19 100.1 98 55.1
Sed0027049 Sechium edule HOM05D007964 ORTHO05D010090 1.2e-19 100.1 111 45.0
Glyma.16G161400 Glycine max HOM05D007964 ORTHO05D010090 1.5e-19 99.8 98 49.0
EL10Ac1g01623 Beta vulgaris HOM05D007964 ORTHO05D010090 2.0e-19 99.4 102 52.9
COL.COLO4_29112 Corchorus olitorius HOM05D007964 ORTHO05D010090 3.4e-19 98.6 100 47.0
Psat0s1172g0240 Pisum sativum HOM05D007964 ORTHO05D010090 3.4e-19 98.6 97 52.6
Medtr6g039830 Medicago truncatula HOM05D007964 ORTHO05D010090 7.5e-19 97.4 99 50.5
Prupe.8G043200 Prunus persica HOM05D007964 ORTHO05D010090 9.7e-19 97.1 99 53.5
AUR62026621 Chenopodium quinoa HOM05D007964 ORTHO05D010090 1.3e-18 96.7 99 49.5
AUR62034908 Chenopodium quinoa HOM05D007964 ORTHO05D010090 1.3e-18 96.7 99 49.5
Ca_04662_v3 Cicer arietinum L. HOM05D007964 ORTHO05D010090 2.2e-18 95.9 98 53.1
Sed0009872 Sechium edule HOM05D007964 ORTHO05D010090 3.7e-18 95.1 108 42.6
Aa31LG4G8900 Aethionema arabicum HOM05D007964 ORTHO05D010090 4.8e-18 94.7 107 48.6
THA.LOC104810508 Tarenaya hassleriana HOM05D007964 ORTHO05D010090 4.8e-18 94.7 90 52.2
Ah.05g167820 Amaranthus hybridus HOM05D007964 ORTHO05D010090 8.3e-18 94.0 99 55.6
FvH4_2g12880 Fragaria vesca HOM05D007964 ORTHO05D010090 1.1e-17 93.6 103 46.6
FAN24G2710 Fragaria x ananassa HOM05D007964 ORTHO05D010090 1.1e-17 93.6 103 46.6
BolC6t39631H Brassica oleracea HOM05D007964 ORTHO05D010090 2.4e-17 92.4 107 50.5
Gohir.D06G116200 Gossypium hirsutum HOM05D007964 ORTHO05D010090 2.4e-17 92.4 100 46.0
Gorai.010G134000 Gossypium raimondii HOM05D007964 ORTHO05D010090 2.4e-17 92.4 100 45.0
Gohir.A06G112000 Gossypium hirsutum HOM05D007964 ORTHO05D010090 3.1e-17 92.0 100 45.0
PGR042G2516 Punica granatum HOM05D007964 ORTHO05D010090 5.3e-17 91.3 100 48.0
CANSAT25G1394 Cannabis sativa HOM05D007964 ORTHO05D010090 7.0e-17 90.9 99 51.5
FAN27G1192 Fragaria x ananassa HOM05D007964 ORTHO05D010090 9.1e-17 90.5 103 46.6
A07p37890 Brassica napus HOM05D007964 ORTHO05D010090 1.6e-16 89.7 107 49.5
BraA07t31354Z Brassica rapa HOM05D007964 ORTHO05D010090 1.6e-16 89.7 107 49.5
Lalb_Chr19g0130001 Lupinus albus HOM05D007964 ORTHO05D010090 2.0e-16 89.4 97 49.5
Nn5g28859 Nelumbo nucifera HOM05D007964 ORTHO05D010090 2.0e-16 89.4 87 52.9
RcHm_v2.0_Chr6g0273981 Rosa chinensis HOM05D007964 ORTHO05D010090 2.7e-16 89.0 103 44.7
AT1G71740 Arabidopsis thaliana HOM05D007964 ORTHO05D010090 4.5e-16 88.2 103 48.5
FAN20G1166 Fragaria x ananassa HOM05D007964 ORTHO05D010090 4.5e-16 88.2 103 45.6
BcaC08g46600 Brassica carinata HOM05D007964 ORTHO05D010090 5.9e-16 87.8 140 42.1
C06p45790 Brassica napus HOM05D007964 ORTHO05D010090 5.9e-16 87.8 140 42.1
Sp5g26770 Schrenkiella parvula HOM05D007964 ORTHO05D010090 5.9e-16 87.8 107 48.6
Potri.002G062950 Populus trichocarpa HOM05D007964 ORTHO05D010090 7.7e-16 87.4 102 52.0
Thhalv10019796m.g Eutrema salsugineum HOM05D007964 ORTHO05D010090 2.2e-15 85.9 109 46.8
Carub.0002s1850 Capsella rubella HOM05D007964 ORTHO05D010090 3.8e-15 85.1 103 46.6
CARHR291050 Cardamine hirsuta HOM05D007964 ORTHO05D010090 8.5e-15 84.0 101 46.5
AL2G31310 Arabidopsis lyrata HOM05D007964 ORTHO05D010090 3.2e-14 82.0 106 46.2
CSS0037942 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 1.8e-12 76.3 49 71.4
Os02g0210900 Oryza sativa ssp. japonica HOM05D007964 ORTHO05D010090 1.5e-11 73.2 60 58.3
Aqoxy6G00437 Aquilegia oxysepala HOM05D007964 ORTHO05D010090 2.6e-11 72.4 92 41.3
ATR1120G014 Amborella trichopoda HOM05D007964 ORTHO05D010090 3.5e-08 62.0 42 59.5
Zm00001eb205370 Zea mays HOM05D007964 ORTHO05D010090 3.5e-08 62.0 41 65.9
SGA_v2.0_scaffold16G07882 Striga asiatica HOM05D002803 ORTHO05D003089 5.0e-07 58.2 58 46.6
MSTRG.813 Avicennia marina HOM05D002803 ORTHO05D003089 6.6e-07 57.8 48 56.2
Nitab4.5_0005803g0020 Nicotiana tabacum HOM05D002803 ORTHO05D003089 8.6e-07 57.4 115 33.0
HPP92_000633 Vanilla planifolia HOM05D007964 ORTHO05D010090 8.6e-07 57.4 32 68.8
Cfa018638 Carpinus fangiana HOM05D002803 ORTHO05D003089 1.1e-06 57.0 78 37.2
Ah.02g127220 Amaranthus hybridus HOM05D002803 ORTHO05D003089 1.5e-06 56.6 100 36.0
Nn4g23707 Nelumbo nucifera HOM05D002803 ORTHO05D003089 1.5e-06 56.6 44 54.5
Nn4g23709 Nelumbo nucifera HOM05D002803 ORTHO05D003089 1.5e-06 56.6 44 54.5
Sabra10G0099500 Salix brachista HOM05D002803 ORTHO05D003089 1.5e-06 56.6 43 55.8
EL10Ac6g14513 Beta vulgaris HOM05D002803 ORTHO05D003089 1.9e-06 56.2 81 40.7
Potri.010G130600 Populus trichocarpa HOM05D002803 ORTHO05D003089 1.9e-06 56.2 47 53.2
Prupe.1G304400 Prunus persica HOM05D002803 ORTHO05D003089 1.9e-06 56.2 47 51.1
Actinidia38399 Actinidia chinensis HOM05D002803 ORTHO05D003089 2.5e-06 55.8 44 54.5
Nitab4.5_0000221g0090 Nicotiana tabacum HOM05D002803 ORTHO05D003089 2.5e-06 55.8 46 56.5
Nitab4.5_0007199g0010 Nicotiana tabacum HOM05D002803 ORTHO05D003089 2.5e-06 55.8 46 56.5
Dinv16513 Davidia involucrata HOM05D002803 ORTHO05D003089 3.3e-06 55.5 44 52.3
SGA_v2.0_scaffold59G20630 Striga asiatica HOM05D002803 ORTHO05D003089 3.3e-06 55.5 51 54.9
AT1G49000 Arabidopsis thaliana HOM05D002803 ORTHO05D003089 4.2e-06 55.1 52 46.2
Oeu044623.1 Olea europaea HOM05D002803 ORTHO05D003089 4.2e-06 55.1 108 33.3
PSO135G0167 Papaver somniferum HOM05D002803 ORTHO05D003089 4.2e-06 55.1 43 51.2
TAR374G0994 Trochodendron aralioides HOM05D002803 ORTHO05D003089 4.2e-06 55.1 68 38.2
AL1G55870 Arabidopsis lyrata HOM05D002803 ORTHO05D003089 5.5e-06 54.7 48 50.0
Haze_17431 Corylus avellana HOM05D002803 ORTHO05D003089 5.5e-06 54.7 44 52.3
Nn3g17698 Nelumbo nucifera HOM05D002803 ORTHO05D003089 5.5e-06 54.7 58 46.6
PGR102G2995 Punica granatum HOM05D002803 ORTHO05D003089 5.5e-06 54.7 42 54.8
Ah.03g137920 Amaranthus hybridus HOM05D002803 ORTHO05D003089 7.2e-06 54.3 67 43.3
Cc11_g10690 Coffea canephora HOM05D002803 ORTHO05D003089 7.2e-06 54.3 51 47.1
Migut.E00292 Erythranthe guttata HOM05D002803 ORTHO05D003089 7.2e-06 54.3 52 48.1
SalBow8G3504 Salvia bowleyana HOM05D002803 ORTHO05D003089 7.2e-06 54.3 44 54.5
THA.LOC104822580 Tarenaya hassleriana HOM05D007501 ORTHO05D009528 7.2e-06 54.3 43 51.2
CANSAT56G4361 Cannabis sativa HOM05D007501 ORTHO05D009528 9.5e-06 53.9 48 50.0


User provided reference genes

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