Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003012g0080 Nicotiana tabacum HOM05D005772 ORTHO05D006468 5.4e-36 153.7 71 100.0
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 1.7e-21 105.5 57 87.7
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 2.9e-21 104.8 51 96.1
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 1.9e-17 92.0 50 84.0
SalBow5G0344 Salvia bowleyana HOM05D005772 ORTHO05D006468 1.6e-16 89.0 51 72.5
SalBow5G3743 Salvia bowleyana HOM05D005772 ORTHO05D006468 1.6e-16 89.0 51 72.5
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 6.2e-16 87.0 49 73.5
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 1.8e-15 85.5 51 72.5
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 2.3e-15 85.1 51 74.5
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 5.2e-15 84.0 49 71.4
unitig_22.g6227 Utricularia gibba HOM05D005772 ORTHO05D006468 8.9e-15 83.2 49 71.4
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 1.2e-14 82.8 51 66.7
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 1.5e-14 82.4 51 66.7
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 3.4e-14 81.3 51 66.7
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 4.4e-14 80.9 50 70.0
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 4.4e-14 80.9 50 70.0
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 5.8e-14 80.5 50 72.0
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 1.3e-13 79.3 50 68.0
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 1.3e-13 79.3 50 70.0
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 1.7e-13 79.0 57 61.4
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 2.2e-13 78.6 49 69.4
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 2.2e-13 78.6 58 63.8
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 3.7e-13 77.8 57 59.6
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 6.4e-13 77.0 50 64.0
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 6.4e-13 77.0 50 64.0
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 6.4e-13 77.0 49 67.3
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 8.3e-13 76.6 50 66.0
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 8.3e-13 76.6 57 57.9
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 8.3e-13 76.6 50 64.0
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 1.4e-12 75.9 49 65.3
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 1.9e-12 75.5 50 62.0
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 1.9e-12 75.5 50 60.0
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 1.9e-12 75.5 54 57.4
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 2.4e-12 75.1 50 64.0
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 3.2e-12 74.7 50 62.0
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 3.2e-12 74.7 50 68.0
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 3.2e-12 74.7 50 62.0
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 5.4e-12 73.9 57 54.4
SalBow8G0153 Salvia bowleyana HOM05D005772 ORTHO05D006468 5.4e-12 73.9 41 68.3
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 7.1e-12 73.6 57 56.1
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 7.1e-12 73.6 50 66.0
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 9.2e-12 73.2 59 54.2
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 9.2e-12 73.2 57 54.4
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 9.2e-12 73.2 47 66.0
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 1.6e-11 72.4 57 52.6
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.6e-11 72.4 48 64.6
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 2.7e-11 71.6 50 60.0
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 2.7e-11 71.6 50 60.0
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 2.7e-11 71.6 50 60.0
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 2.7e-11 71.6 50 60.0
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 2.7e-11 71.6 62 56.5
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 3.5e-11 71.2 55 58.2
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 6.0e-11 70.5 57 50.9
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 6.0e-11 70.5 65 53.8
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 5.1e-10 67.4 47 61.7
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 6.6e-10 67.0 57 47.4
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 6.6e-10 67.0 57 47.4
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 1.9e-09 65.5 43 62.8
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 7.3e-09 63.5 50 50.0
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 1.8e-07 58.9 37 64.9
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 3.1e-07 58.2 57 47.4
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 5.2e-07 57.4 42 54.8
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 5.2e-07 57.4 39 61.5
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 1.5e-06 55.8 39 56.4


User provided reference genes

Program Settings