Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002954g0030 Nicotiana tabacum HOM05D004860 ORTHO05D006366 4.9e-94 347.8 178 100.0
Nitab4.5_0001247g0010 Nicotiana tabacum HOM05D004860 ORTHO05D006366 6.4e-70 267.7 154 90.9
Solyc01g080140.3 Solanum lycopersicum HOM05D004860 ORTHO05D006366 4.6e-68 261.5 156 88.5
CAN.G183.30 Capsicum annuum HOM05D004860 ORTHO05D006366 7.8e-68 260.8 154 87.7
Sopen01g031920 Solanum pennellii HOM05D004860 ORTHO05D006366 1.3e-67 260.0 156 88.5
Peaxi162Scf01766g00011 Petunia axillaris HOM05D004860 ORTHO05D006366 6.9e-64 247.7 148 86.5
CSS0038220 Camellia sinensis var. sinensis HOM05D004860 ORTHO05D006366 3.3e-58 228.8 142 84.5
Actinidia40192 Actinidia chinensis HOM05D004860 ORTHO05D006366 2.8e-57 225.7 146 80.1
Haze_00965 Corylus avellana HOM05D004860 ORTHO05D006366 2.8e-57 225.7 150 79.3
Oeu029304.1 Olea europaea HOM05D004860 ORTHO05D006366 2.8e-57 225.7 154 77.3
PGR031G2771 Punica granatum HOM05D004860 ORTHO05D006366 6.2e-57 224.6 143 79.0
Gohir.A05G316600 Gossypium hirsutum HOM05D004860 ORTHO05D006366 1.8e-56 223.0 148 77.0
A10p20640 Brassica napus HOM05D004860 ORTHO05D006366 2.4e-56 222.6 152 75.0
ECA240G4413 Erigeron canadensis HOM05D004860 ORTHO05D006366 2.4e-56 222.6 136 82.4
Eucgr.D02658 Eucalyptus grandis HOM05D004860 ORTHO05D006366 2.4e-56 222.6 155 76.1
MD16G1183500 Malus domestica HOM05D004860 ORTHO05D006366 2.4e-56 222.6 148 79.1
COL.COLO4_21645 Corchorus olitorius HOM05D004860 ORTHO05D006366 3.1e-56 222.2 148 77.0
Potri.008G202300 Populus trichocarpa HOM05D004860 ORTHO05D006366 3.1e-56 222.2 153 74.5
Cc03_g03100 Coffea canephora HOM05D004860 ORTHO05D006366 4.0e-56 221.9 154 75.3
Sed0000368 Sechium edule HOM05D004860 ORTHO05D006366 4.0e-56 221.9 155 75.5
BcaB01g05289 Brassica carinata HOM05D004860 ORTHO05D006366 5.3e-56 221.5 148 77.7
A03p09270 Brassica napus HOM05D004860 ORTHO05D006366 5.3e-56 221.5 148 77.7
C03p10800 Brassica napus HOM05D004860 ORTHO05D006366 5.3e-56 221.5 148 77.7
BolC3t13554H Brassica oleracea HOM05D004860 ORTHO05D006366 5.3e-56 221.5 148 77.7
BolC9t58612H Brassica oleracea HOM05D004860 ORTHO05D006366 5.3e-56 221.5 148 77.0
BraA03t10247Z Brassica rapa HOM05D004860 ORTHO05D006366 5.3e-56 221.5 148 77.7
SalBow5G0733 Salvia bowleyana HOM05D004860 ORTHO05D006366 5.3e-56 221.5 150 77.3
SalBow5G4413 Salvia bowleyana HOM05D004860 ORTHO05D006366 5.3e-56 221.5 150 77.3
TWI73G0632 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 5.3e-56 221.5 154 74.7
FvH4_4g14470 Fragaria vesca HOM05D004860 ORTHO05D006366 6.9e-56 221.1 145 77.2
FAN12G3962 Fragaria x ananassa HOM05D004860 ORTHO05D006366 6.9e-56 221.1 145 77.2
C09p57430 Brassica napus HOM05D004860 ORTHO05D006366 9.0e-56 220.7 148 77.0
TWI53G0789 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 9.0e-56 220.7 139 81.3
AL6G30430 Arabidopsis lyrata HOM05D004860 ORTHO05D006366 1.2e-55 220.3 152 75.0
BcaB01g04878 Brassica carinata HOM05D004860 ORTHO05D006366 1.2e-55 220.3 148 77.0
BcaC04g18624 Brassica carinata HOM05D004860 ORTHO05D006366 1.2e-55 220.3 148 76.4
Carub.0006s1737 Capsella rubella HOM05D004860 ORTHO05D006366 1.2e-55 220.3 152 75.0
Lsat_1_v5_gn_7_67361 Lactuca sativa HOM05D004860 ORTHO05D006366 1.2e-55 220.3 135 82.2
Migut.N00151 Erythranthe guttata HOM05D004860 ORTHO05D006366 1.5e-55 219.9 143 78.3
FAN07G1456 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.5e-55 219.9 148 75.7
BraA10t44127Z Brassica rapa HOM05D004860 ORTHO05D006366 2.0e-55 219.5 152 74.3
ClCG05G005460 Citrullus lanatus HOM05D004860 ORTHO05D006366 2.0e-55 219.5 153 74.5
Sp6g25330 Schrenkiella parvula HOM05D004860 ORTHO05D006366 2.0e-55 219.5 148 76.4
THA.LOC104822311 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 2.0e-55 219.5 143 79.0
vmacro08274 Vaccinium macrocarpon HOM05D004860 ORTHO05D006366 2.0e-55 219.5 173 68.8
Duzib212G0960 Durio zibethinus HOM05D004860 ORTHO05D006366 2.6e-55 219.2 143 77.6
Thhalv10013904m.g Eutrema salsugineum HOM05D004860 ORTHO05D006366 2.6e-55 219.2 148 77.0
Cfa015580 Carpinus fangiana HOM05D004860 ORTHO05D006366 3.4e-55 218.8 149 76.5
RcHm_v2.0_Chr4g0418381 Rosa chinensis HOM05D004860 ORTHO05D006366 3.4e-55 218.8 148 75.7
Thecc.04G221400 Theobroma cacao HOM05D004860 ORTHO05D006366 3.4e-55 218.8 135 81.5
AT5G19050 Arabidopsis thaliana HOM05D004860 ORTHO05D006366 4.5e-55 218.4 152 74.3
Dinv38393 Davidia involucrata HOM05D001530 ORTHO05D004168 4.5e-55 218.4 143 81.1
MELO3C006570.2 Cucumis melo HOM05D004860 ORTHO05D006366 5.8e-55 218.0 153 74.5
FAN22G2324 Fragaria x ananassa HOM05D004860 ORTHO05D006366 5.8e-55 218.0 147 75.5
QL06p004255 Quercus lobata HOM05D004860 ORTHO05D006366 7.6e-55 217.6 150 77.3
MD13G1182900 Malus domestica HOM05D004860 ORTHO05D006366 9.9e-55 217.2 148 77.0
Dinv44480 Davidia involucrata HOM05D001530 ORTHO05D004168 1.3e-54 216.9 154 76.6
MSTRG.24756 Avicennia marina HOM05D004860 ORTHO05D006366 1.7e-54 216.5 137 80.3
Duzib268G1873 Durio zibethinus HOM05D004860 ORTHO05D006366 1.7e-54 216.5 147 74.8
THA.LOC104818790 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 1.7e-54 216.5 172 66.9
Lj6A565G28 Lonicera japonica HOM05D004860 ORTHO05D006366 2.2e-54 216.1 151 74.8
BcaB08g36622 Brassica carinata HOM05D004860 ORTHO05D006366 2.9e-54 215.7 148 75.0
CiPaw.02G092200 Carya illinoinensis HOM05D004860 ORTHO05D006366 4.9e-54 214.9 150 76.0
CsaV3_3G013760 Cucumis sativus L. HOM05D004860 ORTHO05D006366 4.9e-54 214.9 153 73.9
CARHR193940 Cardamine hirsuta HOM05D004860 ORTHO05D006366 8.4e-54 214.2 156 71.8
Glyma.07G256800 Glycine max HOM05D004860 ORTHO05D006366 8.4e-54 214.2 150 75.3
Atru.chr4.2574 Acer truncatum HOM05D004860 ORTHO05D006366 1.4e-53 213.4 135 77.8
Gorai.009G340700 Gossypium raimondii HOM05D004860 ORTHO05D006366 1.9e-53 213.0 162 69.8
Phvul.003G093000 Phaseolus vulgaris HOM05D004860 ORTHO05D006366 1.9e-53 213.0 154 72.7
Lj3C761T9 Lonicera japonica HOM05D004860 ORTHO05D006366 2.4e-53 212.6 158 70.9
Glyma.17G017300 Glycine max HOM05D004860 ORTHO05D006366 3.2e-53 212.2 150 74.7
unitig_8.g2879 Utricularia gibba HOM05D004860 ORTHO05D006366 3.2e-53 212.2 154 72.7
VMungo1215G0515 Vigna mungo HOM05D004860 ORTHO05D006366 3.2e-53 212.2 154 72.1
GSVIVG01017886001 Vitis vinifera HOM05D004860 ORTHO05D006366 4.2e-53 211.8 142 75.4
EL10Ac3g06352 Beta vulgaris HOM05D004860 ORTHO05D006366 5.4e-53 211.5 142 73.9
TAR636G2819 Trochodendron aralioides HOM05D004860 ORTHO05D006366 5.4e-53 211.5 135 78.5
CANSAT78G2493 Cannabis sativa HOM05D004860 ORTHO05D006366 7.1e-53 211.1 148 73.6
Rhsim04G0207200 Rhododendron simsii HOM05D004860 ORTHO05D006366 9.3e-53 210.7 188 63.8
SGA_v2.0_scaffold166G38376 Striga asiatica HOM05D004860 ORTHO05D006366 9.3e-53 210.7 176 67.0
TAR365G0160 Trochodendron aralioides HOM05D004860 ORTHO05D006366 9.3e-53 210.7 153 71.9
Ciclev10005293m.g Citrus clementina HOM05D004860 ORTHO05D006366 1.6e-52 209.9 147 72.8
Lalb_Chr07g0177321 Lupinus albus HOM05D004860 ORTHO05D006366 2.7e-52 209.1 142 76.1
Aa31LG11G10670 Aethionema arabicum HOM05D004860 ORTHO05D006366 3.5e-52 208.8 146 74.7
Lj4g0005512 Lotus japonicus HOM05D004860 ORTHO05D006366 1.0e-51 207.2 147 72.8
Manes.15G022900 Manihot esculenta HOM05D004860 ORTHO05D006366 1.3e-51 206.8 142 73.9
Manes.03G184900 Manihot esculenta HOM05D004860 ORTHO05D006366 1.8e-51 206.5 134 77.6
HanXRQChr09g0248101 Helianthus annuus HOM05D004860 ORTHO05D006366 3.0e-51 205.7 134 79.1
Ca_21591_v3 Cicer arietinum L. HOM05D004860 ORTHO05D006366 3.9e-51 205.3 154 70.8
Nn4g26191 Nelumbo nucifera HOM05D004860 ORTHO05D006366 3.9e-51 205.3 146 72.6
Ah.13g074180 Amaranthus hybridus HOM05D004860 ORTHO05D006366 6.7e-51 204.5 151 71.5
Sc13g0003950 Simmondsia chinensis HOM05D004860 ORTHO05D006366 8.7e-51 204.1 153 71.2
arahy.Tifrunner.gnm1.ann1.K193BP Arachis hypogaea HOM05D004860 ORTHO05D006366 1.5e-50 203.4 136 76.5
Ah.07g203980 Amaranthus hybridus HOM05D004860 ORTHO05D006366 4.3e-50 201.8 148 70.3
arahy.Tifrunner.gnm1.ann1.PDW3QZ Arachis hypogaea HOM05D004860 ORTHO05D006366 4.3e-50 201.8 153 69.3
Psat4g031440 Pisum sativum HOM05D004860 ORTHO05D006366 4.3e-50 201.8 154 69.5
TPR.G20138 Trifolium pratense HOM05D004860 ORTHO05D006366 5.6e-50 201.4 158 67.1
Medtr4g117310 Medicago truncatula HOM05D004860 ORTHO05D006366 7.4e-50 201.1 154 68.2
MBI17_g12009_MAGBIO Magnolia biondii HOM05D004860 ORTHO05D006366 9.6e-50 200.7 145 75.2
Aqoxy2G03261 Aquilegia oxysepala HOM05D004860 ORTHO05D006366 2.8e-49 199.1 130 77.7
AUR62030079 Chenopodium quinoa HOM05D004860 ORTHO05D006366 2.8e-49 199.1 127 78.0
ATR0626G115 Amborella trichopoda HOM05D004860 ORTHO05D006366 6.2e-49 198.0 130 74.6
PSO407G0112 Papaver somniferum HOM05D004860 ORTHO05D006366 5.3e-48 194.9 148 70.3
PSO170G1688 Papaver somniferum HOM05D004860 ORTHO05D006366 9.0e-48 194.1 148 70.3
Gohir.D05G318100 Gossypium hirsutum HOM05D004860 ORTHO05D006366 3.4e-47 192.2 132 74.2
SEGI_28969 Sequoiadendron giganteum HOM05D004860 ORTHO05D006366 3.4e-47 192.2 128 74.2
Os07g0211800 Oryza sativa ssp. japonica HOM05D004860 ORTHO05D006366 1.3e-46 190.3 130 73.1
HPP92_027344 Vanilla planifolia HOM05D004860 ORTHO05D006366 1.7e-46 189.9 155 66.5
Nn1g02160 Nelumbo nucifera HOM05D004860 ORTHO05D006366 2.2e-46 189.5 131 71.0
Actinidia12990 Actinidia chinensis HOM05D004860 ORTHO05D006366 2.9e-46 189.1 170 64.7
Zm00001eb303280 Zea mays HOM05D004860 ORTHO05D006366 6.4e-46 188.0 141 70.2
CDE02G3435 Ceratophyllum demersum HOM05D004860 ORTHO05D006366 7.1e-45 184.5 132 71.2
Prupe.1G151200 Prunus persica HOM05D004860 ORTHO05D006366 7.1e-45 184.5 113 85.0
Migut.G00288 Erythranthe guttata HOM05D004860 ORTHO05D006366 1.2e-44 183.7 115 80.9
CiPaw.01G159800 Carya illinoinensis HOM05D004860 ORTHO05D006366 2.3e-43 179.5 125 74.4
SalBow2G3077 Salvia bowleyana HOM05D004860 ORTHO05D006366 3.3e-42 175.6 148 62.2
AUR62038223 Chenopodium quinoa HOM05D004860 ORTHO05D006366 5.6e-42 174.9 113 78.8
Hund12197 Selenicereus undatus HOM05D004860 ORTHO05D000105 7.4e-42 174.5 115 77.4
SMO119G0283 Selaginella moellendorffii HOM05D004860 ORTHO05D006366 9.6e-42 174.1 130 66.9
AagrBONN_evm.TU.Sc2ySwM_117.2400 Anthoceros agrestis HOM05D004860 ORTHO05D006366 2.1e-41 172.9 142 62.0
Pp3c4_4720 Physcomitrium patens HOM05D004860 ORTHO05D006366 5.3e-40 168.3 126 64.3
Actinidia23474 Actinidia chinensis HOM05D004860 ORTHO05D006366 6.9e-40 167.9 108 80.6
Cpa.g.sc16.26 Carica papaya HOM05D004860 ORTHO05D006366 6.5e-38 161.4 151 61.6
Sabra08G0159200 Salix brachista HOM05D004860 ORTHO05D006366 6.9e-32 141.4 136 60.3
Mapoly0095s0018 Marchantia polymorpha HOM05D004860 ORTHO05D006366 2.0e-31 139.8 115 61.7
SHI00369 Sapria himalayana HOM05D004860 ORTHO05D006366 9.7e-26 120.9 122 57.4
THA.LOC104820105 Tarenaya hassleriana HOM05D001530 ORTHO05D004168 9.7e-18 94.4 103 54.4
Oeu017197.2 Olea europaea HOM05D004860 ORTHO05D006366 1.4e-16 90.5 46 93.5
SHI00370 Sapria himalayana HOM05D004860 ORTHO05D000023 2.2e-14 83.2 43 90.7
CBR_g23273 Chara braunii HOM05D004860 ORTHO05D006366 2.5e-13 79.7 80 50.0
Cre06.g283034 Chlamydomonas reinhardtii HOM05D004860 ORTHO05D006366 7.2e-13 78.2 121 38.8
Mapoly0174s0021 Marchantia polymorpha HOM05D004860 ORTHO05D006366 2.8e-09 66.2 68 50.0
Cfa023854 Carpinus fangiana HOM05D004860 ORTHO05D126341 2.0e-07 60.1 143 33.6
A02p05180 Brassica napus HOM05D004860 ORTHO05D006366 5.9e-07 58.5 61 52.5
BraA02t05478Z Brassica rapa HOM05D004860 ORTHO05D006366 7.7e-07 58.2 62 53.2
HPP92_017189 Vanilla planifolia HOM05D004860 ORTHO05D006366 8.5e-06 54.7 32 78.1


User provided reference genes

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