Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002930g0010 Nicotiana tabacum HOM05D005964 ORTHO05D007242 3.0e-168 595.1 301 100.0
Nitab4.5_0000030g0090 Nicotiana tabacum HOM05D005964 ORTHO05D007242 2.7e-161 572.0 300 96.7
Sopen08g024420 Solanum pennellii HOM05D005964 ORTHO05D007242 1.1e-141 506.9 301 85.0
Solyc08g075770.3 Solanum lycopersicum HOM05D005964 ORTHO05D007242 3.1e-141 505.4 301 84.7
Peaxi162Scf02295g00024 Petunia axillaris HOM05D005964 ORTHO05D007242 1.6e-137 493.0 301 83.1
Dinv28013 Davidia involucrata HOM05D005964 ORTHO05D007242 4.5e-100 368.6 282 66.3
RcHm_v2.0_Chr7g0213391 Rosa chinensis HOM05D005964 ORTHO05D007242 5.7e-95 351.7 270 64.1
FvH4_5g23960 Fragaria vesca HOM05D005964 ORTHO05D007242 3.7e-94 349.0 270 64.4
FAN13G2421 Fragaria x ananassa HOM05D005964 ORTHO05D007242 4.8e-94 348.6 274 63.9
Prupe.5G020400 Prunus persica HOM05D005964 ORTHO05D007242 4.8e-94 348.6 262 67.2
Lj8A334G75 Lonicera japonica HOM05D005964 ORTHO05D007242 1.4e-93 347.1 295 60.7
FAN18G2518 Fragaria x ananassa HOM05D005964 ORTHO05D007242 4.1e-93 345.5 270 64.1
Migut.E01349 Erythranthe guttata HOM05D005964 ORTHO05D007242 3.5e-92 342.4 288 63.5
Gohir.A03G000012 Gossypium hirsutum HOM05D005964 ORTHO05D007242 5.9e-92 341.7 271 63.1
MD00G1001800 Malus domestica HOM05D005964 ORTHO05D007242 5.9e-92 341.7 272 64.3
Actinidia18160 Actinidia chinensis HOM05D005964 ORTHO05D007242 1.0e-91 340.9 296 59.5
Oeu046805.1 Olea europaea HOM05D005964 ORTHO05D007242 1.3e-91 340.5 294 60.5
Duzib084G0482 Durio zibethinus HOM05D005964 ORTHO05D007242 3.8e-91 339.0 271 63.8
Thecc.03G317600 Theobroma cacao HOM05D005964 ORTHO05D007242 3.8e-91 339.0 277 62.8
Actinidia14743 Actinidia chinensis HOM05D005964 ORTHO05D007242 5.0e-91 338.6 291 59.8
Manes.17G003600 Manihot esculenta HOM05D005964 ORTHO05D007242 1.5e-90 337.0 300 58.3
Cc08_g05080 Coffea canephora HOM05D005964 ORTHO05D007242 4.2e-90 335.5 254 65.7
MD06G1015300 Malus domestica HOM05D005964 ORTHO05D007242 5.5e-90 335.1 272 63.2
Potri.001G130900 Populus trichocarpa HOM05D005964 ORTHO05D007242 7.2e-90 334.7 301 60.5
Duzib205G1143 Durio zibethinus HOM05D005964 ORTHO05D007242 2.1e-89 333.2 271 63.1
SGA_v2.0_scaffold111G31365 Striga asiatica HOM05D005964 ORTHO05D007242 4.0e-88 328.9 291 59.1
Cfa012590 Carpinus fangiana HOM05D005964 ORTHO05D007242 2.0e-87 326.6 270 62.6
Gohir.D03G177900 Gossypium hirsutum HOM05D005964 ORTHO05D007242 3.3e-87 325.9 293 58.4
Gorai.003G187200 Gossypium raimondii HOM05D005964 ORTHO05D007242 3.3e-87 325.9 293 58.4
CiPaw.11G103200 Carya illinoinensis HOM05D005964 ORTHO05D007242 4.4e-87 325.5 270 64.1
CANSAT21G0049 Cannabis sativa HOM05D005964 ORTHO05D007242 5.7e-87 325.1 270 61.5
Gohir.A08G150100 Gossypium hirsutum HOM05D005964 ORTHO05D007242 7.5e-87 324.7 268 61.9
Eucgr.E01239 Eucalyptus grandis HOM05D005964 ORTHO05D007242 9.7e-87 324.3 276 60.9
Gorai.004G178600 Gossypium raimondii HOM05D005964 ORTHO05D007242 1.7e-86 323.6 268 62.3
Eucgr.E01230 Eucalyptus grandis HOM05D005964 ORTHO05D007242 2.2e-86 323.2 276 60.5
PGSC0003DMG400030871 Solanum tuberosum HOM05D005964 ORTHO05D007242 3.7e-86 322.4 183 83.6
Hma1.2p1_0544F.1_g175520 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 6.3e-86 321.6 272 61.0
Dinv22873 Davidia involucrata HOM05D005964 ORTHO05D007242 8.2e-86 321.2 258 64.7
Potri.003G103000 Populus trichocarpa HOM05D005964 ORTHO05D007242 2.0e-84 316.6 301 58.5
Lsat_1_v5_gn_5_58981 Lactuca sativa HOM05D005964 ORTHO05D007242 2.7e-84 316.2 275 59.6
PGR042G2449 Punica granatum HOM05D005964 ORTHO05D007242 2.2e-83 313.2 273 60.1
MSTRG.1771 Avicennia marina HOM05D005964 ORTHO05D007242 8.5e-83 311.2 297 56.6
Atru.chr6.1471 Acer truncatum HOM05D005964 ORTHO05D007242 1.1e-82 310.8 273 60.1
CSS0036776 Camellia sinensis var. sinensis HOM05D005964 ORTHO05D007242 1.1e-82 310.8 224 65.6
Glyma.09G213600 Glycine max HOM05D005964 ORTHO05D007242 1.9e-82 310.1 297 54.9
ECA240G3292 Erigeron canadensis HOM05D005964 ORTHO05D007242 5.5e-82 308.5 270 60.4
MELO3C013795.2 Cucumis melo HOM05D005964 ORTHO05D007242 9.4e-82 307.8 297 56.6
CsaV3_3G001060 Cucumis sativus L. HOM05D005964 ORTHO05D007242 9.4e-82 307.8 297 56.9
HanXRQChr13g0412031 Helianthus annuus HOM05D005964 ORTHO05D007242 9.4e-82 307.8 267 58.8
Ciclev10002048m.g Citrus clementina HOM05D005964 ORTHO05D007242 1.2e-81 307.4 276 58.0
Rhsim07G0138900 Rhododendron simsii HOM05D005964 ORTHO05D007242 1.2e-81 307.4 375 47.7
Lalb_Chr05g0215451 Lupinus albus HOM05D005964 ORTHO05D007242 3.6e-81 305.8 297 53.5
TAR381G0569 Trochodendron aralioides HOM05D005964 ORTHO05D007242 2.3e-80 303.1 268 60.1
Sc01g0007030 Simmondsia chinensis HOM05D005964 ORTHO05D007242 5.2e-80 302.0 263 60.1
GSVIVG01022785001 Vitis vinifera HOM05D005964 ORTHO05D007242 8.8e-80 301.2 233 67.4
EL10Ac5g11971 Beta vulgaris HOM05D005964 ORTHO05D007242 2.0e-79 300.1 270 56.7
Glyma.01G149400 Glycine max HOM05D005964 ORTHO05D007242 4.4e-79 298.9 300 53.0
unitig_899.g14736 Utricularia gibba HOM05D005964 ORTHO05D007242 7.5e-79 298.1 291 56.0
Lj2g0015502 Lotus japonicus HOM05D005964 ORTHO05D007242 2.2e-78 296.6 297 52.9
Psat2g142160 Pisum sativum HOM05D005964 ORTHO05D007242 3.7e-78 295.8 301 52.8
VMungo1215G0316 Vigna mungo HOM05D005964 ORTHO05D007242 6.3e-78 295.0 300 53.3
arahy.Tifrunner.gnm1.ann1.NL6YXC Arachis hypogaea HOM05D005964 ORTHO05D007242 1.4e-77 293.9 279 54.8
arahy.Tifrunner.gnm1.ann1.PBCI2P Arachis hypogaea HOM05D005964 ORTHO05D007242 1.4e-77 293.9 279 54.8
Gohir.D08G171200 Gossypium hirsutum HOM05D005964 ORTHO05D007242 5.4e-77 292.0 242 62.8
Sed0000446 Sechium edule HOM05D005964 ORTHO05D007242 7.0e-77 291.6 297 53.2
Sabra03G0070200 Salix brachista HOM05D005964 ORTHO05D007242 8.6e-75 284.6 231 63.2
TWI12G1028 Tripterygium wilfordii HOM05D005964 ORTHO05D007242 1.1e-74 284.3 253 58.9
TPR.G17260 Trifolium pratense HOM05D005964 ORTHO05D007242 1.2e-73 280.8 292 51.7
Medtr5g026860 Medicago truncatula HOM05D005964 ORTHO05D007242 1.0e-72 277.7 295 49.8
Thhalv10025843m.g Eutrema salsugineum HOM05D005964 ORTHO05D007242 1.5e-71 273.9 266 54.5
AUR62018605 Chenopodium quinoa HOM05D005964 ORTHO05D007242 4.4e-71 272.3 224 61.6
SalBow8G2874 Salvia bowleyana HOM05D005964 ORTHO05D007242 1.3e-70 270.8 209 68.4
BcaC06g30611 Brassica carinata HOM05D005964 ORTHO05D007242 3.7e-70 269.2 297 49.8
BcaNung04009 Brassica carinata HOM05D005964 ORTHO05D007242 3.7e-70 269.2 286 51.0
BcaNung03076 Brassica carinata HOM05D005964 ORTHO05D007242 8.3e-70 268.1 290 51.0
DCAR_008183 Daucus carota HOM05D005964 ORTHO05D007242 1.1e-69 267.7 269 53.5
Sp7g17840 Schrenkiella parvula HOM05D005964 ORTHO05D007242 9.2e-69 264.6 265 53.2
THA.LOC104811073 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 1.6e-68 263.8 296 51.0
BcaC09g51437 Brassica carinata HOM05D005964 ORTHO05D007242 3.5e-68 262.7 287 49.8
Hma1.2p1_0544F.1_g175510 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 3.5e-68 262.7 194 66.0
AT4G19140 Arabidopsis thaliana HOM05D005964 ORTHO05D007242 4.5e-68 262.3 274 52.6
CARHR226010 Cardamine hirsuta HOM05D005964 ORTHO05D007242 5.9e-68 261.9 265 53.2
MSTRG.13905 Avicennia marina HOM05D005964 ORTHO05D007242 5.0e-67 258.8 194 68.6
BolC7t45529H Brassica oleracea HOM05D005964 ORTHO05D007242 5.0e-67 258.8 303 48.8
Aqoxy7G00888 Aquilegia oxysepala HOM05D005964 ORTHO05D007242 4.3e-66 255.8 267 52.8
AL7G34950 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 5.6e-66 255.4 284 48.9
Carub.0007s2201 Capsella rubella HOM05D005964 ORTHO05D007242 7.3e-66 255.0 298 47.0
A01p11100 Brassica napus HOM05D005964 ORTHO05D007242 9.5e-66 254.6 296 48.6
BraA01t01056Z Brassica rapa HOM05D005964 ORTHO05D007242 9.5e-66 254.6 296 48.6
C01p13130 Brassica napus HOM05D005964 ORTHO05D007242 1.6e-65 253.8 299 47.8
BolC1t01286H Brassica oleracea HOM05D005964 ORTHO05D007242 1.6e-65 253.8 299 47.8
Hund11143 Selenicereus undatus HOM05D005964 ORTHO05D007242 2.8e-65 253.1 366 41.8
HanXRQChr03g0081171 Helianthus annuus HOM05D005964 ORTHO05D007242 3.6e-65 252.7 268 52.2
vmacro14234 Vaccinium macrocarpon HOM05D005964 ORTHO05D007242 3.6e-65 252.7 316 44.9
MBI04_g27277_MAGBIO Magnolia biondii HOM05D005964 ORTHO05D007242 8.0e-65 251.5 265 51.3
Aa31LG6G1830 Aethionema arabicum HOM05D005964 ORTHO05D007242 1.0e-64 251.1 278 48.6
FAN18G4345 Fragaria x ananassa HOM05D005964 ORTHO05D007242 1.2e-63 247.7 173 71.1
AUR62007382 Chenopodium quinoa HOM05D005964 ORTHO05D007242 1.5e-63 247.3 216 58.3
Nn1g02066 Nelumbo nucifera HOM05D005964 ORTHO05D007242 7.5e-63 245.0 181 68.0
Sabra01G0101200 Salix brachista HOM05D005964 ORTHO05D007242 6.4e-62 241.9 242 56.2
BraA03t14264Z Brassica rapa HOM05D005964 ORTHO05D007242 5.4e-61 238.8 306 46.1
PSO717G0069 Papaver somniferum HOM05D005964 ORTHO05D007242 1.6e-60 237.3 241 52.3
QL12p001050 Quercus lobata HOM05D005964 ORTHO05D007242 6.0e-60 235.3 204 65.7
PSO675G7054 Papaver somniferum HOM05D005964 ORTHO05D007242 1.0e-59 234.6 273 48.7
Os04g0600400 Oryza sativa ssp. japonica HOM05D005964 ORTHO05D007242 8.6e-59 231.5 294 45.2
THA.LOC104806194 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 8.6e-59 231.5 248 53.2
ClCG10G001030 Citrullus lanatus HOM05D005964 ORTHO05D007242 6.2e-57 225.3 296 45.9
Phvul.002G128700 Phaseolus vulgaris HOM05D005964 ORTHO05D007242 8.0e-57 224.9 230 53.0
Zm00001eb071860 Zea mays HOM05D005964 ORTHO05D007242 2.2e-54 216.9 280 46.4
arahy.Tifrunner.gnm1.ann1.MDU2JP Arachis hypogaea HOM05D005964 ORTHO05D007242 9.2e-53 211.5 262 46.6
CDE12G0810 Ceratophyllum demersum HOM05D005964 ORTHO05D007242 4.7e-49 199.1 242 46.3
ATR0829G145 Amborella trichopoda HOM05D005964 ORTHO05D007242 9.9e-47 191.4 174 57.5
C07p50270 Brassica napus HOM05D005964 ORTHO05D007242 6.4e-46 188.7 290 42.4
A03p51750 Brassica napus HOM05D005964 ORTHO05D007242 7.8e-44 181.8 291 40.9
Ah.12g055850 Amaranthus hybridus HOM05D005964 ORTHO05D007242 5.1e-43 179.1 186 50.5
SEGI_32375 Sequoiadendron giganteum HOM05D005964 ORTHO05D007242 9.5e-42 174.9 182 51.6
HPP92_021116 Vanilla planifolia HOM05D005964 ORTHO05D007242 7.8e-36 155.2 190 43.7
PSO717G0022 Papaver somniferum HOM05D005964 ORTHO05D007242 1.2e-33 147.9 144 56.2
Cpa.g.sc90.42 Carica papaya HOM05D005964 ORTHO05D007242 7.8e-28 128.6 82 69.5
Mapoly0153s0025 Marchantia polymorpha HOM05D005964 ORTHO05D007242 5.3e-24 115.9 246 35.4
Pp3c6_11480 Physcomitrium patens HOM05D005964 ORTHO05D007242 1.3e-17 94.7 272 27.2
AagrBONN_evm.TU.Sc2ySwM_344.1651 Anthoceros agrestis HOM05D005964 ORTHO05D007242 1.9e-13 80.9 187 33.7
Haze_08067 Corylus avellana HOM05D005964 ORTHO05D007242 3.2e-13 80.1 105 42.9
Cpa.g.sc90.41 Carica papaya HOM05D005964 ORTHO05D007242 4.2e-13 79.7 44 81.8
Haze_05991 Corylus avellana HOM05D005964 ORTHO05D007242 2.1e-12 77.4 141 42.6
Oeu042210.1 Olea europaea HOM05D005964 ORTHO05D007242 7.9e-12 75.5 50 66.0
AL8G21390 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 1.1e-10 71.6 105 34.3
CBR_g24057 Chara braunii HOM05D005964 ORTHO05D007242 1.6e-09 67.8 107 34.6
Cpa.g.c47778 Carica papaya HOM05D005964 ORTHO05D007242 2.1e-09 67.4 40 65.0


User provided reference genes

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