Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002816g0090 Nicotiana tabacum HOM05D003443 ORTHO05D009887 2.4e-251 871.7 432 100.0
Nitab4.5_0010023g0010 Nicotiana tabacum HOM05D003443 ORTHO05D009887 5.3e-219 764.2 509 79.0
PGSC0003DMG400014817 Solanum tuberosum HOM05D003443 ORTHO05D009887 5.1e-198 694.5 434 80.4
CAN.G48.26 Capsicum annuum HOM05D003443 ORTHO05D009887 5.7e-197 691.0 431 78.9
Solyc03g093210.3 Solanum lycopersicum HOM05D003443 ORTHO05D009887 1.5e-194 682.9 456 75.9
Peaxi162Scf00241g00037 Petunia axillaris HOM05D003443 ORTHO05D009887 3.5e-154 548.9 450 65.6
Sopen03g024010 Solanum pennellii HOM05D003443 ORTHO05D009887 4.9e-132 475.3 332 72.6
RhsimUnG0094800 Rhododendron simsii HOM05D003443 ORTHO05D009887 8.7e-121 438.0 457 50.3
GSVIVG01008903001 Vitis vinifera HOM05D003443 ORTHO05D009887 7.3e-120 434.9 436 52.1
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 7.1e-115 418.3 418 52.6
TWI56G0082 Tripterygium wilfordii HOM05D003443 ORTHO05D009887 1.0e-113 414.5 425 51.5
TAR628G0851 Trochodendron aralioides HOM05D003443 ORTHO05D009887 3.0e-113 412.9 429 50.8
Thecc.08G121100 Theobroma cacao HOM05D003443 ORTHO05D009887 1.5e-112 410.6 430 50.5
Prupe.1G501800 Prunus persica HOM05D003443 ORTHO05D009887 2.5e-112 409.8 439 50.6
QL09p035320 Quercus lobata HOM05D003443 ORTHO05D009887 1.3e-111 407.5 436 50.0
Atru.chr13.1406 Acer truncatum HOM05D003443 ORTHO05D009887 1.6e-111 407.1 433 50.1
Migut.C01151 Erythranthe guttata HOM05D003443 ORTHO05D009887 9.0e-110 401.4 427 48.9
CANSAT25G3703 Cannabis sativa HOM05D003443 ORTHO05D009887 2.6e-109 399.8 424 48.8
MSTRG.1462 Avicennia marina HOM05D003443 ORTHO05D009887 3.4e-109 399.4 429 48.0
Gohir.A05G233300 Gossypium hirsutum HOM05D003443 ORTHO05D009887 4.5e-109 399.1 426 50.0
Gorai.009G244000 Gossypium raimondii HOM05D003443 ORTHO05D009887 1.3e-108 397.5 426 48.8
MD08G1168100 Malus domestica HOM05D003443 ORTHO05D009887 2.2e-108 396.7 434 49.8
FvH4_2g26511 Fragaria vesca HOM05D003443 ORTHO05D009887 1.1e-107 394.4 430 49.3
Manes.02G161000 Manihot esculenta HOM05D003443 ORTHO05D009887 3.2e-107 392.9 423 48.0
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 7.1e-107 391.7 429 48.7
RcHm_v2.0_Chr6g0295331 Rosa chinensis HOM05D003443 ORTHO05D009887 2.1e-106 390.2 434 48.8
DCAR_003542 Daucus carota HOM05D003443 ORTHO05D009887 1.0e-105 387.9 428 47.9
SalBow7G0745 Salvia bowleyana HOM05D003443 ORTHO05D009887 6.7e-105 385.2 432 47.0
Lsat_1_v5_gn_1_8320 Lactuca sativa HOM05D003443 ORTHO05D009887 3.3e-104 382.9 431 47.3
Nn5g28161 Nelumbo nucifera HOM05D003443 ORTHO05D009887 7.4e-104 381.7 429 48.3
Eucgr.F03767 Eucalyptus grandis HOM05D003443 ORTHO05D009887 2.4e-102 376.7 431 48.7
Sed0010337 Sechium edule HOM05D003443 ORTHO05D009887 2.4e-102 376.7 435 45.3
SalBow7G1610 Salvia bowleyana HOM05D003443 ORTHO05D009887 2.0e-101 373.6 432 46.3
QL09p036517 Quercus lobata HOM05D003443 ORTHO05D009887 5.8e-101 372.1 401 49.4
HanXRQChr04g0111631 Helianthus annuus HOM05D003443 ORTHO05D009887 2.2e-100 370.2 434 46.3
CsaV3_4G028430 Cucumis sativus L. HOM05D003443 ORTHO05D009887 3.8e-100 369.4 427 45.7
Hund16841 Selenicereus undatus HOM05D003443 ORTHO05D009887 1.4e-99 367.5 426 47.7
ClCG11G015590 Citrullus lanatus HOM05D003443 ORTHO05D009887 1.2e-98 364.4 427 45.0
Sabra05G0132100 Salix brachista HOM05D003443 ORTHO05D009887 3.0e-97 359.8 442 45.2
arahy.Tifrunner.gnm1.ann1.5F0RSX Arachis hypogaea HOM05D003443 ORTHO05D009887 1.9e-96 357.1 432 46.3
MELO3C010459.2 Cucumis melo HOM05D003443 ORTHO05D009887 5.7e-96 355.5 434 45.9
arahy.Tifrunner.gnm1.ann1.JR3K98 Arachis hypogaea HOM05D003443 ORTHO05D009887 2.8e-95 353.2 430 45.6
VMungo0647G1328 Vigna mungo HOM05D003443 ORTHO05D009887 3.1e-94 349.7 424 43.2
Lj7C333G3 Lonicera japonica HOM05D003443 ORTHO05D009887 9.0e-94 348.2 361 52.4
SGA_v2.0_scaffold52G18985 Striga asiatica HOM05D003443 ORTHO05D009887 4.5e-93 345.9 432 44.7
Psat2g078480 Pisum sativum HOM05D003443 ORTHO05D009887 1.0e-92 344.7 424 43.4
Lj1g0008620 Lotus japonicus HOM05D003443 ORTHO05D009887 2.9e-92 343.2 425 44.2
FAN27G2831 Fragaria x ananassa HOM05D003443 ORTHO05D009887 3.8e-92 342.8 395 46.1
Medtr5g059070 Medicago truncatula HOM05D003443 ORTHO05D009887 5.0e-92 342.4 428 44.4
Ca_03725_v3 Cicer arietinum L. HOM05D003443 ORTHO05D009887 5.5e-91 339.0 426 42.7
Phvul.008G165600 Phaseolus vulgaris HOM05D003443 ORTHO05D009887 2.1e-90 337.0 426 42.5
ECA247G0446 Erigeron canadensis HOM05D003443 ORTHO05D009887 4.6e-90 335.9 394 45.7
Lalb_Chr10g0101921 Lupinus albus HOM05D003443 ORTHO05D009887 4.6e-90 335.9 425 41.9
Duzib093G0763 Durio zibethinus HOM05D003443 ORTHO05D009887 1.4e-86 324.3 361 48.2
Oeu050896.1 Olea europaea HOM05D003443 ORTHO05D009887 5.9e-85 318.9 457 43.8
Actinidia25684 Actinidia chinensis HOM05D003443 ORTHO05D009887 5.5e-83 312.4 311 53.1
vmacro00815 Vaccinium macrocarpon HOM05D003443 ORTHO05D009887 1.6e-82 310.8 448 43.5
TPR.G8502 Trifolium pratense HOM05D003443 ORTHO05D009887 2.0e-80 303.9 391 42.7
AUR62004719 Chenopodium quinoa HOM05D003443 ORTHO05D009887 5.7e-80 302.4 386 42.5
Haze_00482 Corylus avellana HOM05D003443 ORTHO05D009887 6.3e-79 298.9 430 41.2
Sc01g0001370 Simmondsia chinensis HOM05D003443 ORTHO05D009887 1.2e-77 294.7 382 42.1
EL10Ac1g00011 Beta vulgaris HOM05D003443 ORTHO05D009887 1.5e-77 294.3 425 40.9
Glyma.14G162900 Glycine max HOM05D003443 ORTHO05D009887 5.9e-77 292.4 372 41.7
AUR62023638 Chenopodium quinoa HOM05D003443 ORTHO05D009887 6.7e-73 278.9 374 42.0
Cc10_g11010 Coffea canephora HOM05D003443 ORTHO05D009887 7.4e-72 275.4 272 51.8
MBI06_g02575_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 6.1e-66 255.8 434 39.9
Medtr5g459020 Medicago truncatula HOM05D003443 ORTHO05D009887 6.3e-63 245.7 346 40.5
Potri.005G174900 Populus trichocarpa HOM05D003443 ORTHO05D009887 1.2e-61 241.5 421 36.6
Aqoxy5G02443 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 5.4e-54 216.1 249 46.2
Actinidia29454 Actinidia chinensis HOM05D003443 ORTHO05D009887 3.6e-50 203.4 218 50.5
Cc10_g11020 Coffea canephora HOM05D003443 ORTHO05D009887 3.2e-46 190.3 165 58.8
ATR0684G011 Amborella trichopoda HOM05D003443 ORTHO05D009887 7.8e-45 185.7 260 38.5
Gohir.D05G235701 Gossypium hirsutum HOM05D003443 ORTHO05D009887 7.8e-45 185.7 207 47.8
MBI06_g35594_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.0e-41 175.3 193 49.7
MBI06_g44274_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.1e-33 148.7 318 34.6
PGSC0003DMG400021471 Solanum tuberosum HOM05D003443 ORTHO05D009887 3.1e-33 147.1 93 79.6
Os04g0450500 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D009887 1.5e-32 144.8 269 33.1
Lj7E334T0 Lonicera japonica HOM05D003443 ORTHO05D009887 3.1e-25 120.6 87 71.3
Aqoxy5G02442 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 3.9e-20 103.6 158 42.4
MBI06_g35595_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.6e-18 98.2 136 43.4
COL.COLO4_12190 Corchorus olitorius HOM05D003443 ORTHO05D009887 3.1e-17 94.0 77 57.1
SEGI_24688 Sequoiadendron giganteum HOM05D003443 ORTHO05D009887 9.3e-14 82.4 185 31.4
Migut.K01194 Erythranthe guttata HOM05D003443 ORTHO05D009887 4.8e-10 70.1 221 24.4
Lsat_1_v5_gn_1_21640 Lactuca sativa HOM05D001068 ORTHO05D002190 1.9e-06 58.2 46 54.3
Zm00001eb081310 Zea mays HOM05D003443 ORTHO05D009887 5.4e-06 56.6 120 28.3


User provided reference genes

Program Settings