Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.3e-135 486.5 254 100.0
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.5e-83 312.8 203 86.7
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 5.3e-78 295.0 215 78.1
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 1.4e-62 243.8 215 68.4
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 1.4e-62 243.8 215 68.4
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 8.9e-57 224.6 213 63.4
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 2.7e-53 213.0 213 61.0
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 8.6e-52 208.0 217 61.8
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 4.3e-51 205.7 212 55.2
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 8.0e-50 201.4 216 57.9
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 4.0e-49 199.1 203 55.7
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 8.9e-49 198.0 219 54.8
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 7.5e-48 194.9 225 51.6
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 6.4e-47 191.8 213 51.6
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 3.2e-46 189.5 212 51.9
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 7.8e-45 184.9 220 50.5
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 5.6e-43 178.7 228 52.2
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 1.2e-40 171.0 220 47.7
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 1.2e-40 171.0 208 51.9
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 1.5e-40 170.6 219 49.3
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 9.8e-40 167.9 209 50.7
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 9.8e-40 167.9 194 54.1
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.3e-39 167.5 222 48.2
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 2.9e-39 166.4 205 51.2
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.9e-39 166.4 222 47.7
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 2.9e-39 166.4 215 48.4
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 8.3e-39 164.9 211 50.2
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.9e-38 163.7 222 47.3
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 2.4e-38 163.3 209 47.4
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 3.2e-38 162.9 227 44.9
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 5.4e-38 162.2 223 47.1
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 7.1e-38 161.8 223 47.1
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 7.1e-38 161.8 214 47.7
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 2.1e-37 160.2 218 48.2
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 2.7e-37 159.8 253 43.5
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 2.7e-37 159.8 207 48.8
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 3.5e-37 159.5 211 47.9
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 6.0e-37 158.7 213 47.4
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 6.0e-37 158.7 222 46.4
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 7.8e-37 158.3 186 53.2
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 2.3e-36 156.8 220 48.6
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 5.6e-35 152.1 223 48.0
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 1.2e-34 151.0 212 47.2
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 1.6e-34 150.6 217 44.7
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 1.6e-34 150.6 204 50.5
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 2.1e-34 150.2 196 48.5
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 2.1e-34 150.2 207 48.3
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 2.1e-34 150.2 178 52.8
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 2.8e-34 149.8 208 46.2
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 3.6e-34 149.4 195 47.7
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 4.7e-34 149.1 218 46.3
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 6.2e-34 148.7 214 43.5
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 8.1e-34 148.3 195 47.2
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 3.1e-33 146.4 99 79.8
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 5.2e-33 145.6 212 44.8
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 8.9e-33 144.8 205 45.4
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 8.9e-33 144.8 218 40.4
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 8.9e-33 144.8 210 46.2
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.2e-32 144.4 210 44.8
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 1.2e-32 144.4 211 45.0
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 1.2e-32 144.4 225 44.4
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 2.0e-32 143.7 216 46.3
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 4.4e-32 142.5 217 43.8
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 7.6e-32 141.7 215 41.9
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 9.9e-32 141.4 211 44.1
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 1.3e-31 141.0 177 48.0
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 3.8e-31 139.4 219 44.7
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 1.1e-30 137.9 223 44.4
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 1.4e-30 137.5 238 40.8
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 1.9e-30 137.1 217 46.1
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.9e-30 137.1 136 63.2
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 2.4e-30 136.7 200 44.0
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 9.2e-30 134.8 209 44.5
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 9.2e-30 134.8 208 42.8
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 1.2e-29 134.4 210 42.9
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 2.1e-29 133.7 159 55.3
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 7.8e-29 131.7 233 41.2
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 1.0e-28 131.3 102 66.7
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 1.0e-28 131.3 221 42.5
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 2.3e-28 130.2 220 40.5
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 2.3e-28 130.2 181 46.4
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 5.1e-28 129.0 159 54.1
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 8.6e-28 128.3 217 42.9
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 3.3e-27 126.3 101 68.3
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 4.3e-27 125.9 217 42.9
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 9.6e-27 124.8 195 46.2
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 1.6e-26 124.0 168 47.6
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 2.1e-26 123.6 204 44.1
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 1.4e-25 120.9 172 45.3
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 3.1e-25 119.8 187 42.2
Nitab4.5_0000867g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.0e-24 117.1 137 57.7
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 3.4e-24 116.3 222 39.2
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 9.9e-24 114.8 227 39.2
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 2.4e-22 110.2 217 39.2
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 2.7e-21 106.7 228 36.4
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 4.6e-21 105.9 178 43.8
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.0e-20 104.8 164 47.6
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 7.3e-19 98.6 203 40.4
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 7.3e-19 98.6 203 40.4
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 9.6e-19 98.2 205 40.5
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 4.8e-18 95.9 176 42.6
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 4.8e-18 95.9 207 40.1
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 4.8e-18 95.9 203 39.9
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 6.2e-18 95.5 200 40.0
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 8.1e-18 95.1 158 45.6
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 8.1e-18 95.1 151 46.4
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 1.1e-17 94.7 193 38.9
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 1.1e-17 94.7 215 34.0
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 2.4e-17 93.6 202 39.6
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 2.4e-17 93.6 211 38.9
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 9.0e-17 91.7 193 37.3
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 1.2e-16 91.3 197 38.1
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 2.0e-16 90.5 184 38.6
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 2.0e-16 90.5 176 39.8
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 2.6e-16 90.1 193 38.3
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 2.6e-16 90.1 193 38.3
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 2.6e-16 90.1 193 38.3
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 7.6e-16 88.6 164 41.5
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 7.6e-16 88.6 88 54.5
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 9.9e-16 88.2 163 39.3
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 1.3e-15 87.8 157 43.3
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 3.2e-14 83.2 186 35.5
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 4.2e-14 82.8 108 46.3
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 1.2e-13 81.3 99 48.5
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 3.5e-13 79.7 181 38.1
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 1.3e-12 77.8 170 38.8
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 1.8e-12 77.4 108 42.6
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 2.3e-12 77.0 119 44.5
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 3.9e-12 76.3 199 35.7
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 1.5e-08 64.3 137 38.7
Nitab4.5_0000172g0230 Nicotiana tabacum HOM05D008598 ORTHO05D015416 1.1e-06 58.2 50 62.0
Nitab4.5_0013170g0010 Nicotiana tabacum HOM05D008598 ORTHO05D016200 1.1e-06 58.2 42 73.8


User provided reference genes

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