Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002624g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.5e-56 221.9 109 100.0
Nitab4.5_0002909g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.6e-26 122.9 107 53.3
Nitab4.5_0002924g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.5e-24 115.5 107 53.3
Nitab4.5_0000087g0070 Nicotiana tabacum HOM05D000003 ORTHO05D000006 6.1e-23 110.9 96 53.1
Nitab4.5_0010487g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 5.2e-22 107.8 100 48.0
Nitab4.5_0001980g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000006 6.8e-22 107.5 101 48.5
Nitab4.5_0004504g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.6e-21 105.5 96 51.0
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.8e-21 103.6 92 51.1
Nitab4.5_0006803g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.7e-17 92.8 88 47.7
Nitab4.5_0000541g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 5.0e-17 91.3 86 47.7
Nitab4.5_0003940g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.1e-16 90.1 94 40.4
Nitab4.5_0001640g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.6e-15 85.1 93 47.3
Nitab4.5_0000092g0350 Nicotiana tabacum HOM05D000003 ORTHO05D000006 4.4e-13 78.2 93 45.2
Nitab4.5_0001146g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.8e-13 77.8 93 41.9
Nitab4.5_0001783g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000006 5.8e-13 77.8 117 39.3
Nitab4.5_0006303g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000006 9.8e-13 77.0 76 47.4
Nitab4.5_0003178g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000006 6.4e-12 74.3 99 43.4
Nitab4.5_0002328g0050 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.1e-11 73.6 72 51.4
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-11 73.2 101 34.7
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 2.4e-11 72.4 101 34.7
Sopen00g007260 Solanum pennellii HOM05D000003 ORTHO05D000004 3.2e-11 72.0 101 36.6
Sopen06g013950 Solanum pennellii HOM05D000003 ORTHO05D000004 4.1e-11 71.6 101 36.6
Sopen09g016340 Solanum pennellii HOM05D000004 ORTHO05D000002 5.4e-11 71.2 105 35.2
Nitab4.5_0001360g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 9.2e-11 70.5 90 41.1
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-10 70.1 108 39.8
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-10 69.7 105 35.2
Sopen00g009370 Solanum pennellii HOM05D000024 ORTHO05D000006 2.7e-10 68.9 101 36.6
Sopen07g013730 Solanum pennellii HOM05D000003 ORTHO05D000004 4.6e-10 68.2 105 36.2
Nitab4.5_0001704g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000006 7.8e-10 67.4 98 38.8
Sopen09g030960 Solanum pennellii HOM05D000003 ORTHO05D000004 7.8e-10 67.4 105 34.3
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-09 67.0 101 33.7
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-09 67.0 105 34.3
PGSC0003DMG400003817 Solanum tuberosum HOM05D000024 ORTHO05D000006 1.0e-09 67.0 79 43.0
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-09 66.6 105 36.2
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 3.0e-09 65.5 105 34.3
Nitab4.5_0000044g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.9e-09 65.1 99 33.3
Sopen11g002790 Solanum pennellii HOM05D000024 ORTHO05D000007 3.9e-09 65.1 105 35.2
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 5.0e-09 64.7 105 34.3
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 5.0e-09 64.7 105 33.3
Sopen11g013960 Solanum pennellii HOM05D000003 ORTHO05D000006 8.6e-09 63.9 101 33.7
Sopen11g018190 Solanum pennellii HOM05D000003 ORTHO05D000004 8.6e-09 63.9 101 33.7
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-08 63.5 105 34.3
Sopen09g028340 Solanum pennellii HOM05D000003 ORTHO05D000006 1.1e-08 63.5 103 32.0
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 1.5e-08 63.2 105 32.4
PGSC0003DMG400029819 Solanum tuberosum HOM05D000003 ORTHO05D000006 1.9e-08 62.8 81 38.3
PGSC0003DMG400035720 Solanum tuberosum HOM05D026012 ORTHO05D000006 2.5e-08 62.4 105 35.2
PGSC0003DMG400033353 Solanum tuberosum HOM05D000024 ORTHO05D000006 4.3e-08 61.6 100 31.0
Sopen08g015250 Solanum pennellii HOM05D000003 ORTHO05D000006 1.2e-07 60.1 100 32.0
Nitab4.5_0005413g0080 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.6e-07 59.7 53 54.7
Sopen01g019410 Solanum pennellii HOM05D000003 ORTHO05D000006 1.6e-07 59.7 94 33.0
PGSC0003DMG400046872 Solanum tuberosum HOM05D000003 ORTHO05D000022 2.1e-07 59.3 105 31.4
Nitab4.5_0000151g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000006 8.0e-07 57.4 78 38.5
PGSC0003DMG400039694 Solanum tuberosum HOM05D000155 ORTHO05D000022 4.0e-06 55.1 91 34.1


User provided reference genes

Program Settings