Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 3.9e-151 538.1 270 100.0
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 3.5e-136 488.4 270 91.5
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 5.6e-118 427.9 273 79.9
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 2.8e-117 425.6 280 79.3
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 5.8e-115 417.9 272 79.0
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 3.5e-112 408.7 272 77.9
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 6.2e-109 397.9 273 75.5
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 1.5e-83 313.5 274 60.6
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 5.7e-78 295.0 194 76.8
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 2.2e-77 293.1 275 56.7
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 5.0e-74 282.0 274 55.5
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 6.1e-72 275.0 272 53.7
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 1.1e-70 270.8 212 61.8
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 3.7e-69 265.8 214 60.7
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 4.8e-69 265.4 280 52.5
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 8.2e-69 264.6 276 55.1
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 8.2e-69 264.6 272 52.6
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 4.1e-68 262.3 286 49.7
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 3.5e-67 259.2 272 51.5
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 4.5e-67 258.8 272 51.5
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 4.5e-67 258.8 235 58.3
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 1.0e-66 257.7 272 52.2
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 1.3e-66 257.3 259 54.4
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 1.7e-66 256.9 213 62.0
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 3.8e-66 255.8 220 59.1
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 6.5e-66 255.0 210 61.9
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 1.1e-65 254.2 252 53.6
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 1.5e-65 253.8 274 53.6
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 2.5e-65 253.1 204 60.8
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 3.2e-65 252.7 221 58.4
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 5.5e-65 251.9 256 54.7
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 1.2e-64 250.8 206 61.7
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 1.6e-64 250.4 210 61.4
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 2.7e-64 249.6 204 59.8
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 3.6e-64 249.2 201 60.7
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 3.6e-64 249.2 272 52.2
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 4.7e-64 248.8 251 50.6
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 6.1e-64 248.4 226 56.2
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 1.0e-63 247.7 222 57.7
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 1.8e-63 246.9 254 53.5
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 8.8e-63 244.6 188 64.9
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 1.1e-62 244.2 257 52.1
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 1.5e-62 243.8 270 53.0
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 3.3e-62 242.7 238 56.3
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 3.3e-62 242.7 238 56.3
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 3.3e-62 242.7 284 48.9
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 5.7e-62 241.9 229 55.9
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 7.4e-62 241.5 272 50.0
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 9.7e-62 241.1 222 56.3
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 4.8e-61 238.8 274 50.4
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 6.3e-61 238.4 271 49.8
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 1.4e-60 237.3 201 58.7
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 2.4e-60 236.5 213 57.7
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 2.4e-60 236.5 221 54.8
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 3.1e-60 236.1 272 48.2
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 4.1e-60 235.7 238 55.0
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 4.1e-60 235.7 207 57.0
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 5.3e-60 235.3 276 50.0
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 1.2e-59 234.2 272 47.8
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.6e-59 233.8 243 50.6
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 5.9e-59 231.9 210 55.2
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 1.7e-58 230.3 209 52.2
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 1.7e-58 230.3 275 47.3
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 1.7e-58 230.3 214 55.6
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 2.2e-58 229.9 275 47.3
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 5.0e-58 228.8 208 57.7
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 8.5e-58 228.0 272 47.4
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 1.1e-57 227.6 237 48.5
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 1.9e-57 226.9 210 54.3
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 7.2e-57 224.9 222 53.2
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 2.1e-56 223.4 222 53.6
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 6.8e-55 218.4 222 50.9
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 4.4e-54 215.7 208 54.3
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 1.7e-53 213.8 266 46.2
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 2.8e-53 213.0 276 45.7
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 4.8e-53 212.2 272 46.0
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 4.8e-53 212.2 272 46.0
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 4.8e-53 212.2 272 46.0
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 6.3e-53 211.8 270 45.6
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 8.3e-53 211.5 270 45.6
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 1.8e-52 210.3 276 45.7
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 1.8e-52 210.3 208 52.4
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 2.4e-52 209.9 204 52.5
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 5.4e-52 208.8 272 45.2
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 4.5e-51 205.7 269 44.2
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 1.7e-50 203.8 271 44.6
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 2.9e-50 203.0 192 53.6
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 2.9e-50 203.0 253 43.1
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 6.5e-50 201.8 192 52.1
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 1.5e-49 200.7 238 45.8
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 7.2e-49 198.4 232 47.8
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 1.6e-48 197.2 222 45.9
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 2.1e-48 196.8 222 48.2
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 8.8e-47 191.4 157 61.1
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 2.6e-46 189.9 237 45.1
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 1.3e-45 187.6 192 50.5
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 1.6e-43 180.6 200 49.0
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 2.7e-43 179.9 190 50.5
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 1.3e-42 177.6 142 60.6
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 2.9e-42 176.4 152 59.9
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 4.2e-41 172.6 218 43.6
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 3.0e-39 166.4 242 39.3
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 1.3e-37 161.0 260 37.3
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 4.0e-31 139.4 177 44.1
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 5.6e-25 119.0 199 31.7
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 1.1e-23 114.8 183 35.5
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 1.1e-20 104.8 181 37.0
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 2.6e-14 83.6 122 37.7
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 3.7e-13 79.7 156 30.1
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 4.9e-13 79.3 183 30.1
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 6.4e-13 79.0 179 29.1
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 9.2e-12 75.1 52 61.5
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 1.6e-11 74.3 69 53.6
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 2.3e-10 70.5 69 50.7
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 5.6e-09 65.9 75 46.7
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 5.6e-09 65.9 49 61.2


User provided reference genes

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