Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 2.4e-54 215.3 112 100.0
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 5.5e-43 177.6 104 90.4
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 6.1e-42 174.1 104 92.3
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 1.3e-41 172.9 104 87.5
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 3.0e-41 171.8 105 87.6
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 5.1e-41 171.0 104 91.3
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 7.4e-40 167.2 105 84.8
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 7.4e-40 167.2 105 84.8
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 9.7e-40 166.8 104 85.6
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 1.7e-39 166.0 105 85.7
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 2.2e-39 165.6 104 85.6
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 3.7e-39 164.9 104 85.6
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 3.1e-38 161.8 104 82.7
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 5.3e-38 161.0 103 83.5
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 5.3e-38 161.0 103 83.5
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 6.9e-38 160.6 99 83.8
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 4.5e-37 157.9 104 81.7
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 4.5e-37 157.9 104 81.7
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 2.9e-36 155.2 104 82.7
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 3.8e-36 154.8 104 83.7
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 1.6e-34 149.4 93 83.9
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 2.1e-34 149.1 105 81.0
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 2.7e-34 148.7 105 81.9
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 3.6e-34 148.3 105 79.0
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 4.7e-34 147.9 105 79.0
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 7.9e-34 147.1 105 80.0
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.8e-33 146.0 105 79.0
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.1e-32 143.3 81 91.4
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 2.0e-32 142.5 106 78.3
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 2.0e-32 142.5 105 79.0
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 4.4e-32 141.4 106 78.3
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 5.7e-32 141.0 95 81.1
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 1.7e-31 139.4 106 77.4
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 5.3e-30 134.4 106 77.4
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 5.3e-30 134.4 105 77.1
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 9.1e-30 133.7 95 78.9
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 9.1e-30 133.7 104 74.0
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 9.1e-30 133.7 87 83.9
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.2e-29 133.3 93 81.7
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 1.5e-29 132.9 106 76.4
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 2.0e-29 132.5 105 75.2
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 2.0e-29 132.5 105 77.1
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 2.6e-29 132.1 104 75.0
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 2.6e-29 132.1 104 75.0
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 2.6e-29 132.1 106 76.4
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 3.4e-29 131.7 105 74.3
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 3.4e-29 131.7 105 75.2
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 4.5e-29 131.3 106 76.4
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 5.9e-29 131.0 99 75.8
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 7.7e-29 130.6 105 77.1
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 1.0e-28 130.2 104 73.1
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 1.3e-28 129.8 108 73.1
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 1.3e-28 129.8 101 76.2
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 1.7e-28 129.4 106 75.5
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 2.2e-28 129.0 106 74.5
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 2.9e-28 128.6 108 75.0
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 2.9e-28 128.6 105 71.4
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 5.0e-28 127.9 106 73.6
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 5.0e-28 127.9 106 73.6
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 6.5e-28 127.5 105 72.4
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 6.5e-28 127.5 105 72.4
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 8.5e-28 127.1 106 69.8
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 1.1e-27 126.7 105 73.3
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 1.1e-27 126.7 106 74.5
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 1.4e-27 126.3 101 75.2
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 1.4e-27 126.3 106 71.7
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 1.4e-27 126.3 107 73.8
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.9e-27 125.9 105 73.3
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 1.9e-27 125.9 106 71.7
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 2.5e-27 125.6 105 72.4
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 3.2e-27 125.2 105 73.3
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 4.2e-27 124.8 105 72.4
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 4.2e-27 124.8 105 72.4
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 4.2e-27 124.8 106 71.7
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 4.2e-27 124.8 106 71.7
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 4.2e-27 124.8 105 73.3
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 7.2e-27 124.0 109 71.6
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 9.4e-27 123.6 106 70.8
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 9.4e-27 123.6 109 71.6
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 1.2e-26 123.2 94 76.6
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 1.2e-26 123.2 95 76.8
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 1.6e-26 122.9 105 72.4
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 2.1e-26 122.5 106 72.6
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 2.7e-26 122.1 107 72.9
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 2.7e-26 122.1 108 71.3
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 2.7e-26 122.1 108 68.5
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 4.7e-26 121.3 105 71.4
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 6.1e-26 120.9 107 70.1
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 6.1e-26 120.9 99 73.7
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 8.0e-26 120.6 107 70.1
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 8.0e-26 120.6 106 70.8
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 1.4e-25 119.8 107 70.1
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 1.4e-25 119.8 107 71.0
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 1.4e-25 119.8 106 68.9
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 1.8e-25 119.4 107 70.1
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 1.8e-25 119.4 107 71.0
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 1.8e-25 119.4 94 75.5
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 1.8e-25 119.4 107 72.0
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.8e-25 119.4 93 75.3
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 1.8e-25 119.4 107 70.1
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 1.8e-25 119.4 106 68.9
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 1.8e-25 119.4 104 68.3
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 2.3e-25 119.0 126 63.5
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 2.3e-25 119.0 107 69.2
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 3.0e-25 118.6 107 70.1
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 3.0e-25 118.6 106 70.8
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 3.9e-25 118.2 107 70.1
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 5.2e-25 117.9 107 68.2
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 5.2e-25 117.9 94 74.5
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 6.7e-25 117.5 107 70.1
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 6.7e-25 117.5 105 69.5
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 6.7e-25 117.5 107 68.2
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 8.8e-25 117.1 107 70.1
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 1.1e-24 116.7 111 66.7
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 1.1e-24 116.7 107 68.2
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 1.1e-24 116.7 106 66.0
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 1.5e-24 116.3 107 68.2
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 1.5e-24 116.3 106 68.9
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 2.6e-24 115.5 108 63.0
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 2.6e-24 115.5 94 74.5
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 3.3e-24 115.2 105 70.5
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 3.3e-24 115.2 107 69.2
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 3.3e-24 115.2 107 69.2
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 4.4e-24 114.8 108 67.6
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 9.7e-24 113.6 107 68.2
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 9.7e-24 113.6 107 68.2
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 9.7e-24 113.6 107 68.2
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 9.7e-24 113.6 107 68.2
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 9.7e-24 113.6 107 68.2
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 9.7e-24 113.6 108 68.5
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 1.7e-23 112.8 107 68.2
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 4.8e-23 111.3 105 67.6
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 4.8e-23 111.3 107 67.3
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 8.2e-23 110.5 105 65.7
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.1e-22 110.2 107 67.3
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 1.8e-22 109.4 105 68.6
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 1.8e-22 109.4 105 66.7
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 2.4e-22 109.0 108 65.7
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 2.4e-22 109.0 108 65.7
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 2.4e-22 109.0 108 65.7
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 2.4e-22 109.0 108 65.7
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 3.1e-22 108.6 110 65.5
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 4.1e-22 108.2 105 65.7
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 7.0e-22 107.5 107 68.2
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 7.0e-22 107.5 105 68.6
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 9.1e-22 107.1 105 65.7
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.2e-21 106.7 107 68.2
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 2.0e-21 105.9 94 67.0
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.6e-21 105.5 106 67.0
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 4.5e-21 104.8 105 65.7
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 7.7e-21 104.0 105 64.8
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 4.2e-19 98.2 108 62.0
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 5.5e-19 97.8 93 66.7
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 9.4e-19 97.1 106 62.3
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 1.2e-18 96.7 79 69.6
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 1.2e-18 96.7 83 67.5
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 2.1e-18 95.9 77 71.4
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 4.7e-18 94.7 114 59.6
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 8.0e-18 94.0 112 58.0
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 1.0e-17 93.6 105 62.9
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 4.0e-17 91.7 83 68.7
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 1.5e-16 89.7 83 66.3
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 3.3e-16 88.6 76 71.1
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 7.5e-16 87.4 96 59.4
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 7.5e-16 87.4 93 63.4
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.7e-15 86.3 87 62.1
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 2.8e-15 85.5 111 59.5
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 8.2e-15 84.0 58 75.9
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 1.4e-14 83.2 120 52.5
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 2.4e-14 82.4 51 82.4
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 7.7e-13 77.4 90 56.7
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 5.0e-12 74.7 108 53.7
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 1.1e-11 73.6 41 85.4
DCAR_013632 Daucus carota HOM05D003818 ORTHO05D175173 8.0e-10 67.4 95 49.5
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 1.4e-09 66.6 35 94.3
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 1.4e-09 66.6 105 47.6
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 4.0e-09 65.1 44 77.3
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 9.8e-08 60.5 99 44.4
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 9.8e-08 60.5 99 45.5
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 4.1e-06 55.1 52 61.5


User provided reference genes

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