Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 8.8e-91 337.0 183 100.0
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 7.8e-79 297.4 265 67.9
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 1.7e-78 296.2 265 67.2
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 4.3e-77 291.6 265 66.4
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 1.6e-76 289.7 265 65.7
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 2.1e-68 262.7 265 58.5
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 2.1e-68 262.7 265 58.5
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 3.6e-68 261.9 240 64.2
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 3.6e-68 261.9 265 58.5
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 6.2e-68 261.2 265 58.9
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 8.0e-68 260.8 253 64.0
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 1.1e-67 260.4 265 58.9
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.4e-67 260.0 265 58.1
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 2.3e-67 259.2 265 58.1
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 2.3e-67 259.2 265 57.7
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 3.1e-67 258.8 265 58.5
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 6.8e-67 257.7 265 58.1
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 6.8e-67 257.7 265 58.9
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 6.8e-67 257.7 265 59.2
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 8.9e-67 257.3 265 59.2
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 8.9e-67 257.3 265 58.5
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 2.0e-66 256.1 263 58.6
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 3.4e-66 255.4 265 57.7
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 4.4e-66 255.0 265 58.1
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 4.4e-66 255.0 265 58.1
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 4.4e-66 255.0 265 58.1
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 4.4e-66 255.0 265 57.0
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 5.8e-66 254.6 265 57.4
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 5.8e-66 254.6 265 58.5
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 7.5e-66 254.2 265 57.7
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 9.8e-66 253.8 263 58.2
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 1.7e-65 253.1 265 58.5
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.7e-65 253.1 265 57.0
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 1.7e-65 253.1 265 57.7
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 1.7e-65 253.1 265 58.9
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.9e-65 252.3 265 57.0
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 3.7e-65 251.9 278 55.8
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 4.9e-65 251.5 265 57.7
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 6.4e-65 251.1 265 57.4
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 6.4e-65 251.1 286 53.8
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 8.3e-65 250.8 264 57.6
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 1.1e-64 250.4 265 57.7
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 1.1e-64 250.4 263 58.2
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 1.1e-64 250.4 265 57.0
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 1.9e-64 249.6 265 57.4
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 5.4e-64 248.1 274 56.2
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 7.0e-64 247.7 265 55.5
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 9.2e-64 247.3 259 57.1
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 9.2e-64 247.3 265 55.1
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 1.2e-63 246.9 262 56.1
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 2.0e-63 246.1 263 55.9
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 3.5e-63 245.4 241 63.5
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 4.6e-63 245.0 263 55.1
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 1.3e-62 243.4 264 55.7
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 1.3e-62 243.4 263 55.5
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 3.9e-62 241.9 264 55.3
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 3.9e-62 241.9 262 55.7
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 3.9e-62 241.9 261 53.6
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 3.9e-62 241.9 264 55.3
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 3.9e-62 241.9 264 55.3
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 5.0e-62 241.5 262 55.3
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 5.0e-62 241.5 263 55.5
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 5.0e-62 241.5 262 53.8
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 6.6e-62 241.1 259 56.4
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 6.6e-62 241.1 259 56.4
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 6.6e-62 241.1 263 54.4
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 6.6e-62 241.1 253 58.9
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 8.6e-62 240.7 258 57.4
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 8.6e-62 240.7 259 56.4
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 8.6e-62 240.7 265 53.2
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 8.6e-62 240.7 263 55.5
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 8.6e-62 240.7 262 54.2
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 8.6e-62 240.7 265 54.7
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 1.1e-61 240.4 262 55.0
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 1.5e-61 240.0 262 55.0
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 1.5e-61 240.0 263 54.8
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 1.9e-61 239.6 264 55.3
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 1.9e-61 239.6 259 56.4
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 1.9e-61 239.6 259 56.4
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 1.9e-61 239.6 263 55.5
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 1.9e-61 239.6 262 55.3
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 1.9e-61 239.6 263 55.5
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 2.5e-61 239.2 265 55.1
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 3.3e-61 238.8 255 57.3
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 5.6e-61 238.0 265 55.1
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 5.6e-61 238.0 260 54.6
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 5.6e-61 238.0 260 54.6
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 5.6e-61 238.0 265 55.1
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 5.6e-61 238.0 259 55.6
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 2.8e-60 235.7 253 57.7
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 4.7e-60 235.0 262 54.6
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 8.1e-60 234.2 259 56.0
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 2.3e-59 232.6 251 57.0
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 5.2e-59 231.5 259 54.8
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 8.9e-59 230.7 253 57.7
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 1.2e-58 230.3 262 54.2
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 4.4e-58 228.4 264 52.7
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 4.4e-58 228.4 262 52.3
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 7.5e-58 227.6 253 56.5
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 4.9e-57 224.9 206 63.6
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 8.3e-57 224.2 258 53.5
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 8.3e-57 224.2 257 52.9
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 1.1e-56 223.8 258 53.5
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 1.6e-55 219.9 287 50.9
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 6.0e-55 218.0 257 54.5
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 6.0e-55 218.0 265 51.3
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.0e-54 217.2 259 51.4
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 1.5e-53 213.4 264 50.0
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 4.3e-53 211.8 262 48.9
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 2.4e-51 206.1 262 47.3
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 5.2e-51 204.9 214 58.9
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 4.4e-50 201.8 238 52.5
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 4.4e-50 201.8 225 56.0
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 7.6e-50 201.1 262 48.1
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 2.1e-47 193.0 225 53.3
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.1e-45 187.2 257 44.4
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 2.8e-44 182.6 108 91.7
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 1.1e-40 170.6 104 87.5
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 9.6e-37 157.5 252 42.1
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.4e-35 153.7 106 79.2
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 1.7e-33 146.7 254 37.4
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.9e-32 143.3 100 74.0
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 7.9e-31 137.9 77 94.8
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 3.7e-28 129.0 75 90.7
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 6.4e-25 118.2 118 61.0
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 1.0e-22 110.9 120 59.2
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 9.6e-21 104.4 250 30.8
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 4.8e-20 102.1 132 43.9
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 1.1e-16 90.9 59 79.7
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 7.1e-16 88.2 96 46.9
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 5.1e-14 82.0 90 45.6
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 6.9e-11 71.6 51 74.5
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 3.8e-09 65.9 86 38.4
Actinidia13116 Actinidia chinensis HOM05D000001 ORTHO05D009676 3.0e-06 56.2 47 59.6


User provided reference genes

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