Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002066g0070 Nicotiana tabacum HOM05D002808 ORTHO05D003135 3.2e-30 134.4 67 100.0
Peaxi162Scf01021g00005 Petunia axillaris HOM05D002808 ORTHO05D003135 1.7e-23 112.1 62 87.1
Solyc03g006530.3 Solanum lycopersicum HOM05D002808 ORTHO05D003135 2.9e-23 111.3 62 85.5
Sopen03g002530 Solanum pennellii HOM05D002808 ORTHO05D003135 2.9e-23 111.3 62 85.5
PGSC0003DMG400026858 Solanum tuberosum HOM05D002808 ORTHO05D003135 2.9e-23 111.3 62 85.5
CAN.G289.35 Capsicum annuum HOM05D002808 ORTHO05D003135 1.2e-21 105.9 62 80.6
Nitab4.5_0001820g0170 Nicotiana tabacum HOM05D002808 ORTHO05D003135 1.6e-18 95.5 62 71.0
CAN.G1705.3 Capsicum annuum HOM05D002808 ORTHO05D003135 6.9e-17 90.1 62 66.1
Nitab4.5_0006098g0010 Nicotiana tabacum HOM05D002808 ORTHO05D003135 5.8e-16 87.0 62 66.1
Solyc02g078660.4 Solanum lycopersicum HOM05D002808 ORTHO05D003135 1.7e-15 85.5 62 62.9
Sopen02g023520 Solanum pennellii HOM05D002808 ORTHO05D003135 1.7e-15 85.5 62 62.9
Peaxi162Scf00031g00821 Petunia axillaris HOM05D002808 ORTHO05D003135 4.9e-15 84.0 62 62.9
Solyc10g009140.3 Solanum lycopersicum HOM05D002808 ORTHO05D003135 1.1e-14 82.8 62 61.3
Actinidia01909 Actinidia chinensis HOM05D002808 ORTHO05D003135 2.4e-14 81.6 62 56.5
PGSC0003DMG400022806 Solanum tuberosum HOM05D002808 ORTHO05D003135 4.2e-14 80.9 62 59.7
CSS0000867 Camellia sinensis var. sinensis HOM05D002808 ORTHO05D003135 9.3e-14 79.7 65 55.4
Cc02_g12840 Coffea canephora HOM05D002808 ORTHO05D003135 1.2e-13 79.3 62 58.1
Cc09_g10780 Coffea canephora HOM05D002808 ORTHO05D003135 1.2e-13 79.3 62 58.1
Sopen10g004920 Solanum pennellii HOM05D002808 ORTHO05D003135 1.2e-13 79.3 62 59.7
RhsimUnG0043100 Rhododendron simsii HOM05D002808 ORTHO05D003135 1.6e-13 79.0 64 53.1
vmacro03837 Vaccinium macrocarpon HOM05D002808 ORTHO05D003135 2.7e-13 78.2 64 51.6
Nitab4.5_0003341g0020 Nicotiana tabacum HOM05D002808 ORTHO05D003135 4.6e-13 77.4 53 69.8
Dinv07522 Davidia involucrata HOM05D002808 ORTHO05D003135 6.7e-12 73.6 64 50.0
PSO675G4664 Papaver somniferum HOM05D002808 ORTHO05D003135 6.7e-12 73.6 63 49.2
Oeu038236.1 Olea europaea HOM05D002808 ORTHO05D003135 8.7e-12 73.2 59 52.5
PSO541G4209 Papaver somniferum HOM05D002808 ORTHO05D003135 8.7e-12 73.2 63 49.2
QL05p038939 Quercus lobata HOM05D002808 ORTHO05D003135 1.1e-11 72.8 66 50.0
CiPaw.09G054500 Carya illinoinensis HOM05D002808 ORTHO05D003135 9.6e-11 69.7 58 55.2
Sabra04G0023500 Salix brachista HOM05D002808 ORTHO05D003135 9.6e-11 69.7 62 48.4
Potri.011G047100 Populus trichocarpa HOM05D002808 ORTHO05D003135 3.7e-10 67.8 62 45.2
Haze_06527 Corylus avellana HOM05D002808 ORTHO05D003135 4.8e-10 67.4 60 48.3
Sabra11G0032700 Salix brachista HOM05D002808 ORTHO05D003135 6.2e-10 67.0 62 43.5
TAR627G0014 Trochodendron aralioides HOM05D002808 ORTHO05D003135 8.2e-10 66.6 60 46.7
Potri.004G038400 Populus trichocarpa HOM05D002808 ORTHO05D003135 1.1e-09 66.2 62 46.8
Aqoxy1G02592 Aquilegia oxysepala HOM05D002808 ORTHO05D003135 2.4e-09 65.1 65 40.0
Cfa014582 Carpinus fangiana HOM05D002808 ORTHO05D003135 2.4e-09 65.1 61 44.3
Haze_13133 Corylus avellana HOM05D002808 ORTHO05D003135 2.4e-09 65.1 61 45.9
Duzib235G0556 Durio zibethinus HOM05D002808 ORTHO05D003135 4.0e-09 64.3 62 40.3
Manes.17G042200 Manihot esculenta HOM05D002808 ORTHO05D003135 4.0e-09 64.3 62 45.2
SalBow8G4287 Salvia bowleyana HOM05D002808 ORTHO05D003135 6.9e-09 63.5 62 51.6
SalBow8G5370 Salvia bowleyana HOM05D002808 ORTHO05D003135 6.9e-09 63.5 62 51.6
CiPaw.03G174400 Carya illinoinensis HOM05D002808 ORTHO05D003135 9.0e-09 63.2 60 45.0
Peaxi162Scf00748g00011 Petunia axillaris HOM05D002808 ORTHO05D003135 9.0e-09 63.2 62 50.0
Duzib192G0379 Durio zibethinus HOM05D002808 ORTHO05D003135 2.0e-08 62.0 62 40.3
TAR626G1215 Trochodendron aralioides HOM05D002808 ORTHO05D003135 2.0e-08 62.0 60 46.7
CANSAT64G0853 Cannabis sativa HOM05D002808 ORTHO05D003135 3.4e-08 61.2 46 54.3
Migut.M01173 Erythranthe guttata HOM05D002808 ORTHO05D003135 3.4e-08 61.2 66 40.9
TAR626G1282 Trochodendron aralioides HOM05D002808 ORTHO05D003135 3.4e-08 61.2 50 52.0
DCAR_028116 Daucus carota HOM05D002808 ORTHO05D003135 4.5e-08 60.8 62 41.9
Glyma.13G183300 Glycine max HOM05D002808 ORTHO05D003135 5.8e-08 60.5 53 49.1
Lj1A1209T61 Lonicera japonica HOM05D002808 ORTHO05D003135 5.8e-08 60.5 64 40.6
Lj4g0010618 Lotus japonicus HOM05D002808 ORTHO05D003135 7.6e-08 60.1 62 40.3
SHI01937 Sapria himalayana HOM05D002808 ORTHO05D003135 7.6e-08 60.1 61 44.3
Ca_18516_v3 Cicer arietinum L. HOM05D002808 ORTHO05D003135 1.0e-07 59.7 62 40.3
GSVIVG01007118001 Vitis vinifera HOM05D002808 ORTHO05D003135 1.0e-07 59.7 55 45.5
Thecc.06G193100 Theobroma cacao HOM05D002808 ORTHO05D003135 1.7e-07 58.9 62 37.1
TWI38G0056 Tripterygium wilfordii HOM05D002808 ORTHO05D003135 1.7e-07 58.9 60 40.0
MSTRG.7317 Avicennia marina HOM05D002808 ORTHO05D003135 2.2e-07 58.5 61 42.6
Ciclev10017687m.g Citrus clementina HOM05D002808 ORTHO05D003135 2.9e-07 58.2 62 32.3
Manes.13G148600 Manihot esculenta HOM05D002808 ORTHO05D003135 2.9e-07 58.2 66 40.9
Medtr4g089110 Medicago truncatula HOM05D002808 ORTHO05D003135 2.9e-07 58.2 62 40.3
Glyma.07G193100 Glycine max HOM05D002808 ORTHO05D003135 3.8e-07 57.8 60 43.3
PGR042G1039 Punica granatum HOM05D002808 ORTHO05D003135 4.9e-07 57.4 63 41.3
QL08p038142 Quercus lobata HOM05D002808 ORTHO05D003135 4.9e-07 57.4 46 52.2
Lalb_Chr05g0218311 Lupinus albus HOM05D002808 ORTHO05D003135 8.4e-07 56.6 62 38.7
SGA_v2.0_scaffold22G09764 Striga asiatica HOM05D002808 ORTHO05D003135 8.4e-07 56.6 44 63.6
arahy.Tifrunner.gnm1.ann1.2NE36Q Arachis hypogaea HOM05D002808 ORTHO05D003135 1.1e-06 56.2 53 47.2
arahy.Tifrunner.gnm1.ann1.V35IN5 Arachis hypogaea HOM05D002808 ORTHO05D003135 1.1e-06 56.2 53 47.2
COL.COLO4_22781 Corchorus olitorius HOM05D002808 ORTHO05D003135 1.1e-06 56.2 62 37.1
Sed0028146 Sechium edule HOM05D002808 ORTHO05D003135 1.1e-06 56.2 63 39.7
VMungo0251G2678 Vigna mungo HOM05D002808 ORTHO05D003135 1.1e-06 56.2 55 47.3
ClCG03G005720 Citrullus lanatus HOM05D002808 ORTHO05D003135 1.4e-06 55.8 60 41.7
Lj8A114G40 Lonicera japonica HOM05D002808 ORTHO05D003135 1.9e-06 55.5 47 44.7
Nn2g14250 Nelumbo nucifera HOM05D002808 ORTHO05D003135 1.9e-06 55.5 46 47.8
Cpa.g.sc530.4 Carica papaya HOM05D002808 ORTHO05D003135 2.5e-06 55.1 57 36.8
Gohir.A06G125900 Gossypium hirsutum HOM05D002808 ORTHO05D003135 2.5e-06 55.1 62 33.9
Gohir.D06G129900 Gossypium hirsutum HOM05D002808 ORTHO05D003135 2.5e-06 55.1 62 33.9
Gorai.010G151600 Gossypium raimondii HOM05D002808 ORTHO05D003135 2.5e-06 55.1 62 33.9
Nn1g06645 Nelumbo nucifera HOM05D002808 ORTHO05D003135 3.2e-06 54.7 44 52.3
CSS0014200 Camellia sinensis var. sinensis HOM05D002808 ORTHO05D003135 4.2e-06 54.3 46 45.7
Lalb_Chr09g0327531 Lupinus albus HOM05D002808 ORTHO05D003135 4.2e-06 54.3 62 37.1
Rhsim04G0067100 Rhododendron simsii HOM05D002808 ORTHO05D003135 5.5e-06 53.9 58 41.4
Glyma.13G242700 Glycine max HOM05D002808 ORTHO05D003135 7.1e-06 53.5 60 40.0
Psat7g111840 Pisum sativum HOM05D002808 ORTHO05D003135 7.1e-06 53.5 62 37.1
Cc05_g06820 Coffea canephora HOM05D002808 ORTHO05D003135 9.3e-06 53.1 52 46.2
MELO3C002575.2 Cucumis melo HOM05D002808 ORTHO05D003135 9.3e-06 53.1 60 40.0
CsaV3_1G011990 Cucumis sativus L. HOM05D002808 ORTHO05D003135 9.3e-06 53.1 60 40.0
Phvul.002G225500 Phaseolus vulgaris HOM05D002808 ORTHO05D003135 9.3e-06 53.1 53 45.3


User provided reference genes

Program Settings