Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001354g0030 Nicotiana tabacum HOM05D002350 ORTHO05D000091 1.9e-71 272.3 133 100.0
Nitab4.5_0000165g0050 Nicotiana tabacum HOM05D002350 ORTHO05D000091 1.1e-66 256.5 130 96.9
Solyc06g051190.3 Solanum lycopersicum HOM05D002350 ORTHO05D000091 1.2e-57 226.5 133 85.7
Sopen06g017040 Solanum pennellii HOM05D002350 ORTHO05D000091 1.2e-57 226.5 133 85.7
Peaxi162Scf00824g00113 Petunia axillaris HOM05D002350 ORTHO05D000091 7.4e-55 217.2 131 84.0
CAN.G160.38 Capsicum annuum HOM05D002350 ORTHO05D000091 1.1e-50 203.4 124 85.5
Dinv41662 Davidia involucrata HOM05D002350 ORTHO05D000091 3.5e-44 181.8 129 65.1
CSS0048603 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 1.1e-42 176.8 129 63.6
Actinidia32657 Actinidia chinensis HOM05D002350 ORTHO05D000091 9.4e-42 173.7 129 63.6
Rhsim03G0237500 Rhododendron simsii HOM05D002350 ORTHO05D000091 3.9e-40 168.3 129 64.3
Lj4C392G1 Lonicera japonica HOM05D002350 ORTHO05D000091 8.8e-40 167.2 129 61.2
Lj7C663T4 Lonicera japonica HOM05D002350 ORTHO05D000091 2.2e-38 162.5 133 61.7
vmacro06244 Vaccinium macrocarpon HOM05D002350 ORTHO05D000091 1.4e-37 159.8 128 64.1
Lj4C391G5 Lonicera japonica HOM05D002350 ORTHO05D000091 1.8e-37 159.5 129 59.7
SGA_v2.0_scaffold501G52502 Striga asiatica HOM05D002350 ORTHO05D000091 5.3e-37 157.9 128 55.5
COL.COLO4_34763 Corchorus olitorius HOM05D002350 ORTHO05D000091 9.1e-37 157.1 132 54.5
Oeu064188.1 Olea europaea HOM05D002350 ORTHO05D000091 1.6e-36 156.4 132 58.3
HanXRQChr16g0503771 Helianthus annuus HOM05D002350 ORTHO05D000091 4.5e-36 154.8 127 58.3
Cc06_g10350 Coffea canephora HOM05D002350 ORTHO05D000091 5.9e-36 154.5 135 56.3
Sopen12g003370 Solanum pennellii HOM05D002350 ORTHO05D000091 5.9e-36 154.5 123 61.8
HanXRQChr16g0507611 Helianthus annuus HOM05D002350 ORTHO05D000091 1.7e-35 152.9 132 55.3
PGSC0003DMG402000361 Solanum tuberosum HOM05D002350 ORTHO05D000091 2.9e-35 152.1 123 61.0
Migut.N01382 Erythranthe guttata HOM05D002350 ORTHO05D000091 3.8e-35 151.8 128 57.8
Duzib168G2169 Durio zibethinus HOM05D002350 ORTHO05D000091 1.1e-34 150.2 129 55.0
Lsat_1_v5_gn_5_144600 Lactuca sativa HOM05D002350 ORTHO05D000091 1.5e-34 149.8 129 59.7
Duzib168G1106 Durio zibethinus HOM05D002350 ORTHO05D000091 1.9e-34 149.4 129 53.5
HanXRQChr16g0503801 Helianthus annuus HOM05D002350 ORTHO05D000091 2.5e-34 149.1 127 55.1
Thecc.09G101800 Theobroma cacao HOM05D002350 ORTHO05D000091 3.2e-34 148.7 129 55.8
Nitab4.5_0000566g0160 Nicotiana tabacum HOM05D002350 ORTHO05D000091 5.5e-34 147.9 123 58.5
Nitab4.5_0011131g0010 Nicotiana tabacum HOM05D002350 ORTHO05D000091 5.5e-34 147.9 123 58.5
Peaxi162Scf00665g00310 Petunia axillaris HOM05D002350 ORTHO05D000091 5.5e-34 147.9 123 59.3
Duzib150G1289 Durio zibethinus HOM05D002350 ORTHO05D000091 7.2e-34 147.5 129 52.7
ECA234G0874 Erigeron canadensis HOM05D002350 ORTHO05D000091 3.6e-33 145.2 127 57.5
Atru.chr7.1447 Acer truncatum HOM05D002350 ORTHO05D000091 4.7e-33 144.8 129 55.8
CAN.G1642.9 Capsicum annuum HOM05D002350 ORTHO05D000091 6.1e-33 144.4 130 56.9
DCAR_018431 Daucus carota HOM05D002350 ORTHO05D000091 1.4e-32 143.3 128 58.6
TAR624G0594 Trochodendron aralioides HOM05D002350 ORTHO05D000091 1.8e-32 142.9 119 58.8
Cfa003194 Carpinus fangiana HOM05D002350 ORTHO05D000091 3.0e-32 142.1 129 54.3
MSTRG.10607 Avicennia marina HOM05D002350 ORTHO05D000091 4.0e-32 141.7 132 50.8
Cc06_g10360 Coffea canephora HOM05D002350 ORTHO05D000091 6.8e-32 141.0 126 57.1
Cfa003192 Carpinus fangiana HOM05D002350 ORTHO05D000091 2.6e-31 139.0 129 52.7
Haze_25814 Corylus avellana HOM05D002350 ORTHO05D000091 3.4e-31 138.7 129 52.7
Nn8g39091 Nelumbo nucifera HOM05D002350 ORTHO05D000091 4.4e-31 138.3 124 55.6
BcaC06g36654 Brassica carinata HOM05D002350 ORTHO05D000091 9.7e-31 137.1 129 46.5
C07p01790 Brassica napus HOM05D002350 ORTHO05D000091 9.7e-31 137.1 129 46.5
BolC7t40582H Brassica oleracea HOM05D002350 ORTHO05D000091 9.7e-31 137.1 129 46.5
A07p00780 Brassica napus HOM05D002350 ORTHO05D000091 1.3e-30 136.7 129 46.5
BraA07t27876Z Brassica rapa HOM05D002350 ORTHO05D000091 1.3e-30 136.7 129 46.5
BcaB03g16778 Brassica carinata HOM05D002350 ORTHO05D000091 2.2e-30 136.0 127 48.0
A10p17220 Brassica napus HOM05D002350 ORTHO05D000091 2.2e-30 136.0 127 48.8
PSO832G0190 Papaver somniferum HOM05D002350 ORTHO05D000091 2.2e-30 136.0 132 51.5
BraA10t43806Z Brassica rapa HOM05D002350 ORTHO05D000091 2.8e-30 135.6 124 49.2
ECA236G2339 Erigeron canadensis HOM05D002350 ORTHO05D000091 3.7e-30 135.2 132 50.8
CARHR110370 Cardamine hirsuta HOM05D002350 ORTHO05D000091 4.8e-30 134.8 129 49.6
TAR624G0664 Trochodendron aralioides HOM05D002350 ORTHO05D000091 4.8e-30 134.8 123 57.7
Sp3g33240 Schrenkiella parvula HOM05D002350 ORTHO05D000091 8.3e-30 134.0 129 45.7
Migut.K00531 Erythranthe guttata HOM05D002350 ORTHO05D000091 1.1e-29 133.7 132 48.5
Haze_25813 Corylus avellana HOM05D002350 ORTHO05D000091 1.8e-29 132.9 129 51.9
A09p59080 Brassica napus HOM05D002350 ORTHO05D000091 2.4e-29 132.5 126 46.0
BcaB03g16779 Brassica carinata HOM05D002350 ORTHO05D000091 3.1e-29 132.1 129 45.0
BraA09t41291Z Brassica rapa HOM05D002350 ORTHO05D000091 3.1e-29 132.1 126 46.0
GSVIVG01015313001 Vitis vinifera HOM05D002350 ORTHO05D000091 3.1e-29 132.1 130 52.3
C08p42360 Brassica napus HOM05D002350 ORTHO05D000091 4.1e-29 131.7 126 46.8
arahy.Tifrunner.gnm1.ann1.2RFB5Y Arachis hypogaea HOM05D002350 ORTHO05D000091 5.3e-29 131.3 119 52.9
C07p01760 Brassica napus HOM05D002350 ORTHO05D000091 5.3e-29 131.3 129 47.3
DCAR_010692 Daucus carota HOM05D002350 ORTHO05D000091 5.3e-29 131.3 129 51.9
BcaB08g34892 Brassica carinata HOM05D002350 ORTHO05D000091 9.1e-29 130.6 126 46.8
BcaC06g36662 Brassica carinata HOM05D002350 ORTHO05D000091 9.1e-29 130.6 129 46.5
BcaC07g41231 Brassica carinata HOM05D002350 ORTHO05D000091 9.1e-29 130.6 126 46.8
BolC7t40573H Brassica oleracea HOM05D002350 ORTHO05D000091 9.1e-29 130.6 129 46.5
Oeu064190.1 Olea europaea HOM05D002350 ORTHO05D000091 1.2e-28 130.2 130 52.3
BcaC06g36656 Brassica carinata HOM05D002350 ORTHO05D000091 2.0e-28 129.4 129 46.5
BolC7t40580H Brassica oleracea HOM05D002350 ORTHO05D000091 2.0e-28 129.4 129 46.5
Aqoxy7G03876 Aquilegia oxysepala HOM05D002350 ORTHO05D000091 2.7e-28 129.0 132 52.3
arahy.Tifrunner.gnm1.ann1.7X0VYH Arachis hypogaea HOM05D002350 ORTHO05D000091 2.7e-28 129.0 119 52.1
DCAR_018379 Daucus carota HOM05D002350 ORTHO05D000091 2.7e-28 129.0 114 54.4
BraA07t27871Z Brassica rapa HOM05D002350 ORTHO05D000091 3.5e-28 128.6 129 46.5
Ciclev10007331m.g Citrus clementina HOM05D002350 ORTHO05D000091 3.5e-28 128.6 129 51.2
Aa31LG8G16870 Aethionema arabicum HOM05D002350 ORTHO05D000091 5.9e-28 127.9 129 47.3
BraA07t27873Z Brassica rapa HOM05D002350 ORTHO05D000091 5.9e-28 127.9 129 45.7
Thhalv10001897m.g Eutrema salsugineum HOM05D002350 ORTHO05D000091 5.9e-28 127.9 129 44.2
AL3G48270 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 7.7e-28 127.5 129 45.0
Thhalv10001896m.g Eutrema salsugineum HOM05D002350 ORTHO05D000091 1.0e-27 127.1 129 45.7
AL3G48310 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 1.3e-27 126.7 129 44.2
AT2G19910 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 1.3e-27 126.7 129 44.2
Gorai.001G008800 Gossypium raimondii HOM05D002350 ORTHO05D000091 1.3e-27 126.7 129 49.6
AT2G19930 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 1.7e-27 126.3 129 44.2
AL3G48290 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 2.2e-27 125.9 129 45.7
CiPaw.03G226000 Carya illinoinensis HOM05D002350 ORTHO05D000091 3.8e-27 125.2 133 48.9
Prupe.7G221200 Prunus persica HOM05D002350 ORTHO05D000091 3.8e-27 125.2 133 51.1
SalBow5G3880 Salvia bowleyana HOM05D002350 ORTHO05D000091 3.8e-27 125.2 132 46.2
arahy.Tifrunner.gnm1.ann1.HAD3B9 Arachis hypogaea HOM05D002350 ORTHO05D000091 5.0e-27 124.8 119 52.1
CSS0049937 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 6.5e-27 124.4 76 73.7
Gohir.D07G008700 Gossypium hirsutum HOM05D002350 ORTHO05D000091 6.5e-27 124.4 129 48.8
CSS0029567 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 1.1e-26 123.6 99 59.6
CSS0045169 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 1.1e-26 123.6 99 59.6
MELO3C015406.2 Cucumis melo HOM05D002350 ORTHO05D000091 1.5e-26 123.2 121 52.9
CsaV3_1G039730 Cucumis sativus L. HOM05D002350 ORTHO05D000091 4.2e-26 121.7 121 52.1
C07p01730 Brassica napus HOM05D002350 ORTHO05D000091 5.5e-26 121.3 135 41.5
AT2G19920 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 7.2e-26 120.9 132 43.2
Carub.0003s3418 Capsella rubella HOM05D002350 ORTHO05D000091 7.2e-26 120.9 126 46.0
Sed0013258 Sechium edule HOM05D002350 ORTHO05D000091 9.4e-26 120.6 121 50.4
Gohir.A07G008300 Gossypium hirsutum HOM05D002350 ORTHO05D000091 1.6e-25 119.8 129 48.1
PGR102G2642 Punica granatum HOM05D002350 ORTHO05D000091 1.6e-25 119.8 130 46.9
arahy.Tifrunner.gnm1.ann1.9LQV7C Arachis hypogaea HOM05D002350 ORTHO05D000091 3.6e-25 118.6 119 50.4
Carub.0003s3417 Capsella rubella HOM05D002350 ORTHO05D000091 3.6e-25 118.6 124 45.2
MD15G1195400 Malus domestica HOM05D002350 ORTHO05D000091 3.6e-25 118.6 133 48.9
QL02p042039 Quercus lobata HOM05D002350 ORTHO05D000091 3.6e-25 118.6 127 48.8
VMungo0464G0493 Vigna mungo HOM05D002350 ORTHO05D000091 4.7e-25 118.2 128 46.1
ATR0705G139 Amborella trichopoda HOM05D002350 ORTHO05D000091 6.1e-25 117.9 129 48.8
Phvul.004G176400 Phaseolus vulgaris HOM05D002350 ORTHO05D000091 8.0e-25 117.5 128 46.1
Potri.007G081300 Populus trichocarpa HOM05D002350 ORTHO05D000091 1.0e-24 117.1 129 45.0
PSO210G2001 Papaver somniferum HOM05D002350 ORTHO05D000091 1.4e-24 116.7 121 49.6
PSO210G7085 Papaver somniferum HOM05D002350 ORTHO05D000091 1.4e-24 116.7 121 49.6
CANSAT56G1437 Cannabis sativa HOM05D002350 ORTHO05D000091 5.2e-24 114.8 129 46.5
Manes.16G110000 Manihot esculenta HOM05D002350 ORTHO05D000091 6.8e-24 114.4 129 46.5
Psat1g046880 Pisum sativum HOM05D002350 ORTHO05D000091 8.8e-24 114.0 130 46.2
FAN19G1217 Fragaria x ananassa HOM05D002350 ORTHO05D000091 1.2e-23 113.6 132 49.2
RcHm_v2.0_Chr2g0091711 Rosa chinensis HOM05D002350 ORTHO05D000091 2.0e-23 112.8 131 48.9
Lalb_Chr14g0371831 Lupinus albus HOM05D002350 ORTHO05D000091 2.6e-23 112.5 118 48.3
FvH4_1g05980 Fragaria vesca HOM05D002350 ORTHO05D000091 3.4e-23 112.1 132 48.5
Glyma.01G008700 Glycine max HOM05D002350 ORTHO05D000091 5.7e-23 111.3 126 44.4
Lj2g0003052 Lotus japonicus HOM05D002350 ORTHO05D000091 5.7e-23 111.3 128 43.8
CSS0030372 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 7.5e-23 110.9 93 57.0
Potri.006G164400 Populus trichocarpa HOM05D002350 ORTHO05D000091 7.5e-23 110.9 129 44.2
Lsat_1_v5_gn_8_96860 Lactuca sativa HOM05D002350 ORTHO05D000091 9.8e-23 110.5 132 45.5
MBI04_g30106_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 2.2e-22 109.4 149 42.3
Eucgr.C03764 Eucalyptus grandis HOM05D002350 ORTHO05D000091 4.8e-22 108.2 113 49.6
SEGI_05646 Sequoiadendron giganteum HOM05D002350 ORTHO05D000091 4.8e-22 108.2 125 46.4
SEGI_17992 Sequoiadendron giganteum HOM05D002350 ORTHO05D000091 4.8e-22 108.2 125 46.4
Sc08g0007950 Simmondsia chinensis HOM05D002350 ORTHO05D000091 6.3e-22 107.8 126 46.0
CSS0049796 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 8.3e-22 107.5 118 44.9
TPR.G21372 Trifolium pratense HOM05D002350 ORTHO05D000091 8.3e-22 107.5 128 46.1
Medtr6g088660 Medicago truncatula HOM05D002350 ORTHO05D000091 1.1e-21 107.1 124 44.4
FAN26G1444 Fragaria x ananassa HOM05D002350 ORTHO05D000091 2.4e-21 105.9 131 46.6
FAN26G3334 Fragaria x ananassa HOM05D002350 ORTHO05D000091 2.4e-21 105.9 131 46.6
EL10Ac8g18397 Beta vulgaris HOM05D002350 ORTHO05D000091 4.1e-21 105.1 129 41.9
CANSAT56G4254 Cannabis sativa HOM05D002350 ORTHO05D000091 5.4e-21 104.8 129 41.9
Cpa.g.sc40.69 Carica papaya HOM05D002350 ORTHO05D000091 5.4e-21 104.8 129 45.0
AUR62021426 Chenopodium quinoa HOM05D002350 ORTHO05D000091 1.2e-20 103.6 132 45.5
MD02G1064400 Malus domestica HOM05D002350 ORTHO05D000091 2.7e-20 102.4 127 45.7
THA.LOC104808318 Tarenaya hassleriana HOM05D002350 ORTHO05D000091 2.7e-20 102.4 170 33.5
Aqoxy6G02290 Aquilegia oxysepala HOM05D002350 ORTHO05D000091 3.5e-20 102.1 82 63.4
Sabra06G0125300 Salix brachista HOM05D002350 ORTHO05D000091 3.5e-20 102.1 129 41.1
ClCG03G016200 Citrullus lanatus HOM05D002350 ORTHO05D000091 5.9e-20 101.3 121 47.1
EL10Ac8g18396 Beta vulgaris HOM05D002350 ORTHO05D000091 2.3e-19 99.4 131 43.5
Ah.14g083290 Amaranthus hybridus HOM05D002350 ORTHO05D000091 2.9e-19 99.0 126 42.9
RcHm_v2.0_Chr2g0091721 Rosa chinensis HOM05D002350 ORTHO05D000091 6.6e-19 97.8 129 42.6
FvH4_1g05990 Fragaria vesca HOM05D002350 ORTHO05D000091 2.5e-18 95.9 129 39.5
FAN19G2534 Fragaria x ananassa HOM05D002350 ORTHO05D000091 2.5e-18 95.9 129 39.5
FAN23G2545 Fragaria x ananassa HOM05D002350 ORTHO05D000091 2.5e-18 95.9 129 38.8
RcHm_v2.0_Chr5g0014401 Rosa chinensis HOM05D002350 ORTHO05D000091 4.2e-18 95.1 161 40.4
Sabra06G0136400 Salix brachista HOM05D002350 ORTHO05D000091 2.8e-17 92.4 129 38.0
Hund26256 Selenicereus undatus HOM05D002350 ORTHO05D000091 6.1e-17 91.3 133 39.1
A07p00750 Brassica napus HOM05D002350 ORTHO05D000091 1.0e-16 90.5 95 44.2
Ca_25564_v3 Cicer arietinum L. HOM05D002350 ORTHO05D000091 1.0e-16 90.5 94 48.9
Hund09132 Selenicereus undatus HOM05D002350 ORTHO05D000091 1.0e-16 90.5 98 48.0
BcaB03g16780 Brassica carinata HOM05D002350 ORTHO05D000091 1.4e-16 90.1 79 51.9
AUR62042309 Chenopodium quinoa HOM05D002350 ORTHO05D000091 1.2e-15 87.0 83 54.2
AUR62010903 Chenopodium quinoa HOM05D002350 ORTHO05D000091 2.0e-15 86.3 131 39.7
AagrBONN_evm.TU.Sc2ySwM_368.2512 Anthoceros agrestis HOM05D002350 ORTHO05D000091 7.8e-12 74.3 83 43.4
Lj4P404T2 Lonicera japonica HOM05D002350 ORTHO05D000091 7.8e-12 74.3 76 48.7
AagrBONN_evm.TU.Sc2ySwM_344.1644 Anthoceros agrestis HOM05D002042 ORTHO05D003928 5.0e-11 71.6 120 35.0
QL04p081705 Quercus lobata HOM05D002350 ORTHO05D000091 8.6e-11 70.9 80 51.2
AUR62010902 Chenopodium quinoa HOM05D002350 ORTHO05D000091 5.6e-10 68.2 61 57.4
Pp3c5_20740 Physcomitrium patens HOM05D002350 ORTHO05D000091 9.5e-10 67.4 126 31.0
Pp3c6_8520 Physcomitrium patens HOM05D002350 ORTHO05D000091 1.2e-09 67.0 126 31.7
CDE05G2422 Ceratophyllum demersum HOM05D002350 ORTHO05D000091 1.6e-09 66.6 54 55.6
Mapoly0048s0033 Marchantia polymorpha HOM05D002350 ORTHO05D000091 1.6e-09 66.6 135 32.6
AUR62021424 Chenopodium quinoa HOM05D002350 ORTHO05D000091 2.8e-09 65.9 92 38.0
Pp3c6_8521 Physcomitrium patens HOM05D002350 ORTHO05D000091 4.7e-09 65.1 112 33.0
RcHm_v2.0_Chr2g0091681 Rosa chinensis HOM05D002350 ORTHO05D000091 1.8e-08 63.2 49 55.1
COL.COLO4_34762 Corchorus olitorius HOM05D002350 ORTHO05D000091 2.6e-07 59.3 50 52.0
AagrBONN_evm.TU.Sc2ySwM_117.903 Anthoceros agrestis HOM05D002350 ORTHO05D000091 5.8e-07 58.2 129 30.2
AagrBONN_evm.TU.Sc2ySwM_117.901 Anthoceros agrestis HOM05D000349 ORTHO05D000620 7.5e-07 57.8 128 32.0
A01p33760 Brassica napus HOM05D002350 ORTHO05D000091 1.3e-06 57.0 52 46.2
BolC8t51797H Brassica oleracea HOM05D002350 ORTHO05D000091 2.2e-06 56.2 49 49.0


User provided reference genes

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