Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000892g0140 Nicotiana tabacum HOM05D004925 ORTHO05D005643 6.6e-170 600.9 368 100.0
Nitab4.5_0005278g0010 Nicotiana tabacum HOM05D004925 ORTHO05D005643 4.3e-121 438.7 284 85.2
Sopen01g033490 Solanum pennellii HOM05D004925 ORTHO05D005643 1.4e-116 423.7 356 69.7
Solyc01g073920.3 Solanum lycopersicum HOM05D004925 ORTHO05D005643 2.5e-116 422.9 356 69.7
Peaxi162Scf00878g00036 Petunia axillaris HOM05D004925 ORTHO05D005643 9.1e-111 404.4 374 67.4
CAN.G261.6 Capsicum annuum HOM05D004925 ORTHO05D005643 1.5e-81 307.4 256 68.8
Dinv43491 Davidia involucrata HOM05D004925 ORTHO05D005643 7.3e-68 261.9 348 47.7
Dinv43931 Davidia involucrata HOM05D004925 ORTHO05D005643 2.3e-66 256.9 361 48.8
MSTRG.5000 Avicennia marina HOM05D004925 ORTHO05D005643 3.7e-64 249.6 354 47.7
SalBow4G3044 Salvia bowleyana HOM05D004925 ORTHO05D005643 1.2e-59 234.6 344 46.8
Hma1.2p1_0860F.1_g229570 Hydrangea macrophylla HOM05D004925 ORTHO05D005643 1.6e-59 234.2 363 47.4
SalBow4G1354 Salvia bowleyana HOM05D004925 ORTHO05D005643 3.6e-59 233.0 344 46.5
PGSC0003DMG400006329 Solanum tuberosum HOM05D004925 ORTHO05D005643 1.2e-57 228.0 319 50.5
Oeu053533.1 Olea europaea HOM05D004925 ORTHO05D005643 5.8e-57 225.7 360 45.6
SGA_v2.0_scaffold95G28775 Striga asiatica HOM05D004925 ORTHO05D005643 1.1e-55 221.5 346 46.0
Migut.N01664 Erythranthe guttata HOM05D004925 ORTHO05D005643 3.2e-55 219.9 349 44.1
Rhsim01G0134400 Rhododendron simsii HOM05D004925 ORTHO05D005643 4.6e-54 216.1 301 45.8
GSVIVG01001367001 Vitis vinifera HOM05D004925 ORTHO05D005643 7.8e-54 215.3 360 43.9
Oeu024926.1 Olea europaea HOM05D004925 ORTHO05D005643 1.5e-52 211.1 406 38.9
Cc02_g27070 Coffea canephora HOM05D004925 ORTHO05D005643 2.1e-51 207.2 359 43.2
CiPaw.13G000800 Carya illinoinensis HOM05D004925 ORTHO05D005643 6.2e-51 205.7 287 46.3
vmacro12585 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 2.4e-47 193.7 373 38.6
Nn2g15712 Nelumbo nucifera HOM05D004925 ORTHO05D005643 2.1e-46 190.7 361 41.3
TWI73G1095 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 1.0e-45 188.3 342 40.1
TWI09G1281 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 1.7e-45 187.6 378 39.4
Sc17g0006850 Simmondsia chinensis HOM05D004925 ORTHO05D005643 5.6e-44 182.6 331 41.7
ClCG10G012660 Citrullus lanatus HOM05D004925 ORTHO05D005643 7.3e-44 182.2 351 42.5
CANSAT11G0505 Cannabis sativa HOM05D004925 ORTHO05D005643 1.6e-43 181.0 396 39.9
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 1.6e-43 181.0 334 41.9
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 1.6e-43 181.0 334 41.9
MD02G1318600 Malus domestica HOM05D004925 ORTHO05D005643 2.8e-43 180.3 357 38.7
CsaV3_3G032460 Cucumis sativus L. HOM05D004925 ORTHO05D005643 3.6e-43 179.9 366 40.7
Atru.chr11.2695 Acer truncatum HOM05D004925 ORTHO05D005643 8.1e-43 178.7 313 40.9
Cfa004806 Carpinus fangiana HOM05D004925 ORTHO05D005643 8.1e-43 178.7 342 42.1
TAR623G0394 Trochodendron aralioides HOM05D004925 ORTHO05D005643 8.1e-43 178.7 359 40.9
Actinidia15855 Actinidia chinensis HOM05D004925 ORTHO05D005643 1.1e-42 178.3 331 42.9
MD07G1002600 Malus domestica HOM05D004925 ORTHO05D005643 1.8e-42 177.6 368 37.5
Manes.10G151100 Manihot esculenta HOM05D004925 ORTHO05D005643 4.0e-42 176.4 387 38.0
Potri.001G229800 Populus trichocarpa HOM05D004925 ORTHO05D005643 5.2e-42 176.0 383 38.4
TAR369G0809 Trochodendron aralioides HOM05D004925 ORTHO05D005643 1.2e-41 174.9 354 40.4
RcHm_v2.0_Chr1g0313411 Rosa chinensis HOM05D004925 ORTHO05D005643 1.1e-39 168.3 203 47.3
SGA_v2.0_scaffold4G02236 Striga asiatica HOM05D001227 ORTHO05D001082 3.2e-39 166.8 306 42.2
Thecc.01G416300 Theobroma cacao HOM05D004925 ORTHO05D005643 7.1e-39 165.6 322 42.5
COL.COLO4_25137 Corchorus olitorius HOM05D004925 ORTHO05D005643 1.2e-38 164.9 291 38.8
unitig_22.g5889 Utricularia gibba HOM05D004925 ORTHO05D005643 2.7e-38 163.7 336 38.7
MELO3C030929.2 Cucumis melo HOM05D004925 ORTHO05D005643 1.7e-37 161.0 407 36.9
Gohir.A08G026720 Gossypium hirsutum HOM05D004925 ORTHO05D005643 3.9e-37 159.8 274 40.9
vmacro21158 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 8.7e-37 158.7 381 34.4
Duzib114G0283 Durio zibethinus HOM05D004925 ORTHO05D005643 1.1e-36 158.3 283 43.1
Gorai.004G035400 Gossypium raimondii HOM05D004925 ORTHO05D005643 1.1e-36 158.3 282 40.1
Gohir.D08G037401 Gossypium hirsutum HOM05D004925 ORTHO05D005643 2.5e-36 157.1 273 39.9
FAN01G2076 Fragaria x ananassa HOM05D004925 ORTHO05D005643 4.3e-36 156.4 193 47.7
FvH4_7g00160 Fragaria vesca HOM05D004925 ORTHO05D005643 9.6e-36 155.2 193 47.7
FAN06G2494 Fragaria x ananassa HOM05D004925 ORTHO05D005643 9.6e-36 155.2 193 47.7
FAN10G2396 Fragaria x ananassa HOM05D004925 ORTHO05D005643 9.6e-36 155.2 193 47.7
QL04p000066 Quercus lobata HOM05D004925 ORTHO05D005643 9.6e-36 155.2 346 39.0
FAN01G0312 Fragaria x ananassa HOM05D004925 ORTHO05D005643 1.6e-35 154.5 193 47.7
FAN03G1097 Fragaria x ananassa HOM05D004925 ORTHO05D005643 6.2e-35 152.5 193 47.2
arahy.Tifrunner.gnm1.ann1.WEBP2W Arachis hypogaea HOM05D004925 ORTHO05D005643 1.8e-34 151.0 279 39.1
Actinidia21578 Actinidia chinensis HOM05D004925 ORTHO05D005643 3.1e-34 150.2 187 49.7
ECA248G0029 Erigeron canadensis HOM05D004925 ORTHO05D005643 6.9e-34 149.1 314 37.9
HanXRQChr01g0018661 Helianthus annuus HOM05D004925 ORTHO05D005643 9.0e-34 148.7 310 36.5
Eucgr.G03409 Eucalyptus grandis HOM05D004925 ORTHO05D005643 2.0e-33 147.5 300 38.7
AL4G28340 Arabidopsis lyrata HOM05D004925 ORTHO05D005643 3.4e-33 146.7 306 37.9
Cpa.g.sc189.17 Carica papaya HOM05D004925 ORTHO05D005643 3.4e-33 146.7 185 50.3
Lsat_1_v5_gn_1_110881 Lactuca sativa HOM05D004925 ORTHO05D005643 3.4e-33 146.7 356 37.4
Prupe.2G004100 Prunus persica HOM05D004925 ORTHO05D005643 4.4e-33 146.4 365 34.2
Ciclev10032226m.g Citrus clementina HOM05D004925 ORTHO05D005643 7.6e-33 145.6 340 43.2
PGR119G0958 Punica granatum HOM05D004925 ORTHO05D005643 7.6e-33 145.6 313 37.7
QL04p003160 Quercus lobata HOM05D004925 ORTHO05D005643 1.7e-32 144.4 389 35.5
MBI19_g23208_MAGBIO Magnolia biondii HOM05D004925 ORTHO05D005643 2.9e-32 143.7 358 36.6
Phvul.005G039900 Phaseolus vulgaris HOM05D004925 ORTHO05D005643 1.4e-31 141.4 340 35.0
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 1.4e-31 141.4 325 34.8
PSO384G4128 Papaver somniferum HOM05D004925 ORTHO05D005643 1.9e-31 141.0 304 34.9
Hund25510 Selenicereus undatus HOM05D004925 ORTHO05D005643 1.9e-31 141.0 322 36.3
HanXRQChr11g0341641 Helianthus annuus HOM05D004925 ORTHO05D005643 1.2e-30 138.3 300 37.7
THA.LOC104801020 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 3.5e-30 136.7 357 35.0
Carub.0004s1427 Capsella rubella HOM05D004925 ORTHO05D005643 4.6e-30 136.3 306 37.3
Lj3g0011601 Lotus japonicus HOM05D004925 ORTHO05D005643 6.0e-30 136.0 316 37.3
Sed0010000 Sechium edule HOM05D004925 ORTHO05D005643 6.0e-30 136.0 351 36.5
Sed0003173 Sechium edule HOM05D004925 ORTHO05D005643 1.0e-29 135.2 336 38.4
AT2G32840 Arabidopsis thaliana HOM05D004925 ORTHO05D005643 1.3e-29 134.8 360 35.0
arahy.Tifrunner.gnm1.ann1.BFX48A Arachis hypogaea HOM05D004925 ORTHO05D005643 3.0e-29 133.7 312 36.9
Glyma.08G148900 Glycine max HOM05D004925 ORTHO05D005643 6.6e-29 132.5 328 36.6
Medtr2g060910 Medicago truncatula HOM05D004925 ORTHO05D005643 2.5e-28 130.6 272 37.9
Glyma.15G269200 Glycine max HOM05D004925 ORTHO05D005643 3.3e-28 130.2 354 35.9
Sp1g03770 Schrenkiella parvula HOM05D004925 ORTHO05D005643 4.3e-28 129.8 346 33.8
Ca_02951_v3 Cicer arietinum L. HOM05D004925 ORTHO05D005643 9.6e-28 128.6 289 37.7
HanXRQChr11g0341871 Helianthus annuus HOM05D004925 ORTHO05D005643 4.8e-27 126.3 173 43.9
HanXRQChr11g0341651 Helianthus annuus HOM05D004925 ORTHO05D005643 1.1e-26 125.2 343 32.9
Lalb_Chr03g0033881 Lupinus albus HOM05D004925 ORTHO05D005643 1.4e-26 124.8 272 39.7
Lalb_Chr25g0283541 Lupinus albus HOM05D004925 ORTHO05D005643 1.4e-26 124.8 291 36.1
Aqoxy1G00133 Aquilegia oxysepala HOM05D004925 ORTHO05D005643 2.4e-26 124.0 369 33.6
C05p03080 Brassica napus HOM05D004925 ORTHO05D005643 2.4e-26 124.0 341 35.2
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 4.0e-26 123.2 370 30.5
A10p03360 Brassica napus HOM05D004925 ORTHO05D005643 1.5e-25 121.3 354 33.6
Aa31LG5G4490 Aethionema arabicum HOM05D004925 ORTHO05D005643 1.3e-24 118.2 343 40.5
CARHR126790 Cardamine hirsuta HOM05D004925 ORTHO05D005643 2.9e-24 117.1 338 33.7
BraA10t42612Z Brassica rapa HOM05D004925 ORTHO05D005643 3.8e-24 116.7 354 33.6
Thhalv10009447m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 6.4e-24 115.9 192 40.6
PSO339G6120 Papaver somniferum HOM05D004925 ORTHO05D005643 8.4e-24 115.5 302 39.7
TPR.G11699 Trifolium pratense HOM05D004925 ORTHO05D005643 1.1e-23 115.2 171 44.4
Thhalv10016920m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 3.2e-23 113.6 346 34.1
Sp4g15220 Schrenkiella parvula HOM05D004925 ORTHO05D005643 3.2e-23 113.6 343 33.5
Lj7A564G31 Lonicera japonica HOM05D004925 ORTHO05D005643 5.4e-23 112.8 94 57.4
CDE04G0753 Ceratophyllum demersum HOM05D004925 ORTHO05D005643 7.1e-23 112.5 351 33.3
BolC5t29090H Brassica oleracea HOM05D004925 ORTHO05D005643 6.0e-22 109.4 368 32.6
BcaB01g00977 Brassica carinata HOM05D004925 ORTHO05D005643 1.3e-21 108.2 327 34.6
BcaB02g10501 Brassica carinata HOM05D004925 ORTHO05D005643 2.3e-21 107.5 327 32.1
Medtr4g125960 Medicago truncatula HOM05D004925 ORTHO05D005643 3.9e-21 106.7 315 37.5
C04p16720 Brassica napus HOM05D004925 ORTHO05D005643 1.1e-20 105.1 347 32.9
BolC4t23220H Brassica oleracea HOM05D004925 ORTHO05D005643 1.5e-20 104.8 346 32.9
BraA05t20219Z Brassica rapa HOM05D004925 ORTHO05D005643 1.5e-20 104.8 351 33.9
Rhsim06G0015600 Rhododendron simsii HOM05D004925 ORTHO05D005643 1.3e-19 101.7 332 29.2
THA.LOC104816029 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 3.7e-19 100.1 207 41.1
A05p12810 Brassica napus HOM05D004925 ORTHO05D005643 8.1e-19 99.0 348 33.9
AT1G04930 Arabidopsis thaliana HOM05D004925 ORTHO05D005643 4.0e-18 96.7 334 32.3
CSS0015862 Camellia sinensis var. sinensis HOM05D004925 ORTHO05D005643 5.3e-18 96.3 132 44.7
ATR0598G164 Amborella trichopoda HOM05D004925 ORTHO05D005643 1.5e-17 94.7 341 33.4
AUR62015612 Chenopodium quinoa HOM05D004925 ORTHO05D005643 2.6e-17 94.0 221 44.3
CARHR004330 Cardamine hirsuta HOM05D004925 ORTHO05D005643 2.2e-16 90.9 194 37.1
CSS0038538 Camellia sinensis var. sinensis HOM05D004925 ORTHO05D005643 3.2e-15 87.0 61 65.6
CDE06G1226 Ceratophyllum demersum HOM05D004925 ORTHO05D005643 5.5e-15 86.3 327 30.3
HanXRQChr11g0341671 Helianthus annuus HOM05D004925 ORTHO05D005643 5.5e-15 86.3 331 30.2
Zm00001eb399260 Zea mays HOM05D004925 ORTHO05D005643 5.5e-15 86.3 329 30.1
SEGI_38326 Sequoiadendron giganteum HOM05D004925 ORTHO05D005643 9.3e-15 85.5 177 34.5
Aa31LG1G19930 Aethionema arabicum HOM05D004925 ORTHO05D005643 4.6e-14 83.2 343 28.9
EL10Ac8g20283 Beta vulgaris HOM05D004925 ORTHO05D005643 6.7e-13 79.3 247 35.2
Oeu013586.1 Olea europaea HOM05D004925 ORTHO05D005643 6.7e-13 79.3 71 54.9
AL1G14650 Arabidopsis lyrata HOM05D004925 ORTHO05D005643 1.1e-12 78.6 327 31.2
Mapoly0040s0118 Marchantia polymorpha HOM05D004925 ORTHO05D005643 1.5e-12 78.2 190 35.8
Sabra16G0137200 Salix brachista HOM05D004925 ORTHO05D005643 5.6e-12 76.3 147 38.8
HPP92_020314 Vanilla planifolia HOM05D004925 ORTHO05D005643 7.4e-12 75.9 387 29.7
Os03g0234600 Oryza sativa ssp. japonica HOM05D004925 ORTHO05D005643 4.8e-11 73.2 206 31.1
Haze_10406 Corylus avellana HOM05D004925 ORTHO05D005643 2.4e-10 70.9 58 58.6
Pp3c22_21740 Physcomitrium patens HOM05D004925 ORTHO05D005643 1.7e-08 64.7 172 32.0
Sabra16G0137500 Salix brachista HOM05D004925 ORTHO05D005643 2.2e-08 64.3 234 32.5
A09p67630 Brassica napus HOM05D004925 ORTHO05D005643 6.5e-08 62.8 144 32.6


User provided reference genes

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